RNA–Protein interactions for RNA: ENST00000405570.5

CTNNB1-204, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTNNB1, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-204ENST00000405570 NISCHQ9Y2I1 1504 aa20.04■□□□□ 0.8
CTNNB1-204ENST00000405570 CCDC180Q9P1Z9 1646 aa17.23■□□□□ 0.35
CTNNB1-204ENST00000405570 HRCP23327 699 aa16.94■□□□□ 0.3
CTNNB1-204ENST00000405570 ZCCHC6Q5VYS8 1495 aaKnown RBP16.84■□□□□ 0.29
CTNNB1-204ENST00000405570 DCAF8L2P0C7V8 631 aa16.76■□□□□ 0.27
CTNNB1-204ENST00000405570 SHROOM4Q9ULL8 1493 aa16.71■□□□□ 0.27
CTNNB1-204ENST00000405570 SUPT5HO00267 1087 aaKnown RBP16.65■□□□□ 0.26
CTNNB1-204ENST00000405570 PPARGC1BQ86YN6 1023 aaKnown RBP16.56■□□□□ 0.24
CTNNB1-204ENST00000405570 PCGF6Q9BYE7 350 aa16.56■□□□□ 0.24
CTNNB1-204ENST00000405570 MYO15BQ96JP2 1530 aa16.54■□□□□ 0.24
CTNNB1-204ENST00000405570 DCAF1Q9Y4B6 1507 aa16.44■□□□□ 0.22
CTNNB1-204ENST00000405570 CHIC1Q5VXU3 224 aa16.44■□□□□ 0.22
CTNNB1-204ENST00000405570 ABCC9O60706 1549 aa16.43■□□□□ 0.22
CTNNB1-204ENST00000405570 PELP1Q8IZL8 1130 aaKnown RBP16.31■□□□□ 0.2
CTNNB1-204ENST00000405570 NACADO15069 1562 aa16.08■□□□□ 0.16
CTNNB1-204ENST00000405570 SCRIBQ14160 1630 aa16.08■□□□□ 0.16
CTNNB1-204ENST00000405570 TRIM26Q12899 539 aaPredicted RBP16.04■□□□□ 0.16
CTNNB1-204ENST00000405570 LOC105371045A0A1W2PR82 267 aa16.04■□□□□ 0.16
CTNNB1-204ENST00000405570 SCAF1Q9H7N4 1312 aaKnown RBP16.02■□□□□ 0.15
CTNNB1-204ENST00000405570 RB1CC1Q8TDY2 1594 aa15.92■□□□□ 0.14
CTNNB1-204ENST00000405570 ZEB1P37275 1124 aaPredicted RBP15.91■□□□□ 0.14
CTNNB1-204ENST00000405570 RSF1Q96T23 1441 aaPredicted RBP15.67■□□□□ 0.1
CTNNB1-204ENST00000405570 CECR2Q9BXF3 1484 aa15.67■□□□□ 0.1
CTNNB1-204ENST00000405570 MYT1Q01538 1121 aa15.66■□□□□ 0.1
CTNNB1-204ENST00000405570 PABPN1Q86U42 306 aaKnown RBP eCLIP15.63■□□□□ 0.09
CTNNB1-204ENST00000405570 ACIN1Q9UKV3 1341 aaKnown RBP15.62■□□□□ 0.09
CTNNB1-204ENST00000405570 UNC13AQ9UPW8 1703 aa15.61■□□□□ 0.09
CTNNB1-204ENST00000405570 NEUROD1Q13562 356 aa15.58■□□□□ 0.08
CTNNB1-204ENST00000405570 MROH2BQ7Z745 1585 aa15.55■□□□□ 0.08
CTNNB1-204ENST00000405570 BICRAQ9NZM4 1560 aa15.51■□□□□ 0.07
CTNNB1-204ENST00000405570 GTF3C3Q9Y5Q9 886 aa15.48■□□□□ 0.07
CTNNB1-204ENST00000405570 WIZO95785 1651 aa15.41■□□□□ 0.06
CTNNB1-204ENST00000405570 TRIM41Q8WV44 630 aa15.41■□□□□ 0.06
CTNNB1-204ENST00000405570 BAZ1AQ9NRL2 1556 aaPredicted RBP15.41■□□□□ 0.06
CTNNB1-204ENST00000405570 CENPBP07199 599 aaPredicted RBP15.39■□□□□ 0.05
CTNNB1-204ENST00000405570 FAM9AQ8IZU1 332 aaPredicted RBP15.38■□□□□ 0.05
CTNNB1-204ENST00000405570 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.35■□□□□ 0.05
CTNNB1-204ENST00000405570 DIEXFQ68CQ4 756 aaKnown RBP15.35■□□□□ 0.05
CTNNB1-204ENST00000405570 SMARCA4P51532 1647 aa15.34■□□□□ 0.05
CTNNB1-204ENST00000405570 CCER1Q8TC90 406 aaPredicted RBP15.31■□□□□ 0.04
CTNNB1-204ENST00000405570 EHMT2Q96KQ7 1210 aa15.28■□□□□ 0.04
CTNNB1-204ENST00000405570 TOP2AP11388 1531 aaKnown RBP15.18■□□□□ 0.02
CTNNB1-204ENST00000405570 CCDC88BA6NC98 1476 aa15.12■□□□□ 0.01
CTNNB1-204ENST00000405570 ATAD2BQ9ULI0 1458 aa15.1■□□□□ 0.01
CTNNB1-204ENST00000405570 PEG3Q9GZU2 1588 aa15.08■□□□□ 0.01
CTNNB1-204ENST00000405570 SMARCA2P51531 1590 aa15.08■□□□□ 0
CTNNB1-204ENST00000405570 YTHDC1Q96MU7 727 aaKnown RBP15.06■□□□□ 0
CTNNB1-204ENST00000405570 ZNF316A6NFI3 1004 aaPredicted RBP15.05■□□□□ 0
CTNNB1-204ENST00000405570 EIF4G1Q04637 1599 aaKnown RBP15.02■□□□□ -0
CTNNB1-204ENST00000405570 BAZ1BQ9UIG0 1483 aaKnown RBP15.02□□□□□ -0.01
CTNNB1-204ENST00000405570 MIER1Q8N108 512 aa14.96□□□□□ -0.01
CTNNB1-204ENST00000405570 TTBK1Q5TCY1 1321 aaPredicted RBP14.94□□□□□ -0.02
CTNNB1-204ENST00000405570 WRNQ14191 1432 aaPredicted RBP eCLIP14.92□□□□□ -0.02
CTNNB1-204ENST00000405570 NCAPD3P42695 1498 aa14.91□□□□□ -0.02
CTNNB1-204ENST00000405570 ABCC8Q09428 1581 aa14.89□□□□□ -0.03
CTNNB1-204ENST00000405570 HMGXB3Q12766 1538 aa14.83□□□□□ -0.04
CTNNB1-204ENST00000405570 CEP162Q5TB80 1403 aa14.81□□□□□ -0.04
CTNNB1-204ENST00000405570 CC2D2AQ9P2K1 1620 aa14.77□□□□□ -0.04
CTNNB1-204ENST00000405570 SUPT16HQ9Y5B9 1047 aaKnown RBP14.75□□□□□ -0.05
CTNNB1-204ENST00000405570 TNIKQ9UKE5 1360 aa14.73□□□□□ -0.05
CTNNB1-204ENST00000405570 CLSPNQ9HAW4 1339 aa14.72□□□□□ -0.05
CTNNB1-204ENST00000405570 ANP32EQ9BTT0 268 aa14.71□□□□□ -0.05
CTNNB1-204ENST00000405570 TSHZ2Q9NRE2 1034 aa14.69□□□□□ -0.06
CTNNB1-204ENST00000405570 SOGA1O94964 1423 aa14.68□□□□□ -0.06
CTNNB1-204ENST00000405570 BCL11AQ9H165 835 aa14.67□□□□□ -0.06
CTNNB1-204ENST00000405570 HNRNPUL2Q1KMD3 747 aaKnown RBP14.66□□□□□ -0.06
CTNNB1-204ENST00000405570 SYNJ1O43426 1573 aa14.65□□□□□ -0.06
CTNNB1-204ENST00000405570 CFTRP13569 1480 aa14.64□□□□□ -0.07
CTNNB1-204ENST00000405570 RUSC2Q8N2Y8 1516 aa14.63□□□□□ -0.07
CTNNB1-204ENST00000405570 DNAJC5BQ9UF47 199 aa14.61□□□□□ -0.07
CTNNB1-204ENST00000405570 UBTFP17480 764 aaKnown RBP14.61□□□□□ -0.07
CTNNB1-204ENST00000405570 CADPSQ9ULU8 1353 aa14.59□□□□□ -0.07
CTNNB1-204ENST00000405570 CSRNP3Q8WYN3 585 aa14.58□□□□□ -0.07
CTNNB1-204ENST00000405570 EEA1Q15075 1411 aa14.54□□□□□ -0.08
CTNNB1-204ENST00000405570 GOLGA3Q08378 1498 aa14.51□□□□□ -0.09
CTNNB1-204ENST00000405570 TOP2BQ02880 1626 aa14.51□□□□□ -0.09
CTNNB1-204ENST00000405570 CUX1P39880 1505 aa14.51□□□□□ -0.09
CTNNB1-204ENST00000405570 NESP48681 1621 aa14.49□□□□□ -0.09
CTNNB1-204ENST00000405570 BIVM-ERCC5R4GMW8 1640 aa14.45□□□□□ -0.1
CTNNB1-204ENST00000405570 FANCD2Q9BXW9 1451 aa14.43□□□□□ -0.1
CTNNB1-204ENST00000405570 DHX57Q6P158 1386 aaKnown RBP14.42□□□□□ -0.1
CTNNB1-204ENST00000405570 CLIP1P30622 1438 aa14.41□□□□□ -0.1
CTNNB1-204ENST00000405570 VPS8Q8N3P4 1428 aa14.4□□□□□ -0.1
CTNNB1-204ENST00000405570 PRDM2Q13029 1718 aa14.4□□□□□ -0.1
CTNNB1-204ENST00000405570 BCANQ96GW7 911 aa14.39□□□□□ -0.11
CTNNB1-204ENST00000405570 KCNH8Q96L42 1107 aa14.38□□□□□ -0.11
CTNNB1-204ENST00000405570 APLP2Q06481 763 aa14.37□□□□□ -0.11
CTNNB1-204ENST00000405570 CEP164Q9UPV0 1460 aa14.36□□□□□ -0.11
CTNNB1-204ENST00000405570 FKBP8Q14318 412 aa14.34□□□□□ -0.11
CTNNB1-204ENST00000405570 RBM19Q9Y4C8 960 aaKnown RBP14.34□□□□□ -0.11
CTNNB1-204ENST00000405570 RAPGEF2Q9Y4G8 1499 aa14.34□□□□□ -0.11
CTNNB1-204ENST00000405570 KIF21BO75037 1637 aa14.33□□□□□ -0.12
CTNNB1-204ENST00000405570 FGD5Q6ZNL6 1462 aa14.33□□□□□ -0.12
CTNNB1-204ENST00000405570 KIF27Q86VH2 1401 aa14.32□□□□□ -0.12
CTNNB1-204ENST00000405570 LAMC3Q9Y6N6 1575 aa14.32□□□□□ -0.12
CTNNB1-204ENST00000405570 RANGAP1P46060 587 aaPredicted RBP14.3□□□□□ -0.12
CTNNB1-204ENST00000405570 CUX2O14529 1486 aa14.29□□□□□ -0.12
CTNNB1-204ENST00000405570 TOPBP1Q92547 1522 aa14.27□□□□□ -0.13
CTNNB1-204ENST00000405570 PDS5BQ9NTI5 1447 aa14.27□□□□□ -0.13
CTNNB1-204ENST00000405570 PRXQ9BXM0 1461 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms