RNA–Protein interactions for RNA: ENST00000483591.6

ATXN1-206, Transcript of ataxin 1, humanhuman

TSL 1 (best)

Gene ATXN1, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1-206ENST00000483591 AEBP2Q6ZN18 517 aaPredicted RBP29.83■■■□□ 2.37
ATXN1-206ENST00000483591 CHIC1Q5VXU3 224 aa27.74■■■□□ 2.03
ATXN1-206ENST00000483591 SENP3Q9H4L4 574 aaPredicted RBP25.42■■□□□ 1.66
ATXN1-206ENST00000483591 PHF23Q9BUL5 403 aaPredicted RBP25.05■■□□□ 1.6
ATXN1-206ENST00000483591 FOXD1Q16676 465 aa23.83■■□□□ 1.41
ATXN1-206ENST00000483591 POTEDQ86YR6 584 aa22.88■■□□□ 1.25
ATXN1-206ENST00000483591 PLPPR3Q6T4P5 718 aa22.61■■□□□ 1.21
ATXN1-206ENST00000483591 MSH5O43196 834 aa22.43■■□□□ 1.18
ATXN1-206ENST00000483591 PIAS4Q8N2W9 510 aaPredicted RBP22.07■■□□□ 1.12
ATXN1-206ENST00000483591 PPP6R1Q9UPN7 881 aa21.89■■□□□ 1.09
ATXN1-206ENST00000483591 ADRA2BP18089 450 aa21.74■■□□□ 1.07
ATXN1-206ENST00000483591 NISCHQ9Y2I1 1504 aa20.47■□□□□ 0.87
ATXN1-206ENST00000483591 KCNA4P22459 653 aa20.31■□□□□ 0.84
ATXN1-206ENST00000483591 MAPK8IP2Q13387 824 aaPredicted RBP20.16■□□□□ 0.82
ATXN1-206ENST00000483591 DMRT2Q9Y5R5 561 aa20.11■□□□□ 0.81
ATXN1-206ENST00000483591 PPP4R3CPQ6ZMV5 832 aa20.01■□□□□ 0.79
ATXN1-206ENST00000483591 SCAF1Q9H7N4 1312 aaKnown RBP19.78■□□□□ 0.76
ATXN1-206ENST00000483591 EHMT2Q96KQ7 1210 aa19.7■□□□□ 0.74
ATXN1-206ENST00000483591 NCBP3Q53F19 620 aaKnown RBP19.65■□□□□ 0.74
ATXN1-206ENST00000483591 CACNB1Q02641 598 aaPredicted RBP19.56■□□□□ 0.72
ATXN1-206ENST00000483591 SLC4A1APQ9BWU0 796 aaKnown RBP19.45■□□□□ 0.7
ATXN1-206ENST00000483591 NPM3O75607 178 aaKnown RBP19.4■□□□□ 0.7
ATXN1-206ENST00000483591 CNKSR2Q8WXI2 1034 aa19.29■□□□□ 0.68
ATXN1-206ENST00000483591 DCAF8L1A6NGE4 600 aa19.22■□□□□ 0.67
ATXN1-206ENST00000483591 HOXD11P31277 338 aaPredicted RBP19.18■□□□□ 0.66
ATXN1-206ENST00000483591 RNF39Q9H2S5 420 aa19.14■□□□□ 0.65
ATXN1-206ENST00000483591 CSRNP3Q8WYN3 585 aa19.11■□□□□ 0.65
ATXN1-206ENST00000483591 RNF216Q9NWF9 866 aaPredicted RBP18.85■□□□□ 0.61
ATXN1-206ENST00000483591 C1QBPQ07021 282 aaKnown RBP18.78■□□□□ 0.6
ATXN1-206ENST00000483591 ZBTB22O15209 634 aa18.72■□□□□ 0.59
ATXN1-206ENST00000483591 DNAJC5BQ9UF47 199 aa18.65■□□□□ 0.58
ATXN1-206ENST00000483591 FOXD4L1Q9NU39 408 aa18.5■□□□□ 0.55
ATXN1-206ENST00000483591 ABCC9O60706 1549 aa18.34■□□□□ 0.53
ATXN1-206ENST00000483591 CCDC180Q9P1Z9 1646 aa18.33■□□□□ 0.52
ATXN1-206ENST00000483591 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.17■□□□□ 0.52e-6■□□□□ 11.3
ATXN1-206ENST00000483591 SLC4A2P04920 1241 aa18.15■□□□□ 0.5
ATXN1-206ENST00000483591 MYCNP04198 464 aaPredicted RBP17.9■□□□□ 0.46
ATXN1-206ENST00000483591 U3KPZ7 1027 aaPredicted RBP17.84■□□□□ 0.45
ATXN1-206ENST00000483591 POTEHQ6S545 545 aa17.79■□□□□ 0.44
ATXN1-206ENST00000483591 ATXN8OSP0DMR3 200 aa17.74■□□□□ 0.43
ATXN1-206ENST00000483591 DSG3P32926 999 aa17.74■□□□□ 0.43
ATXN1-206ENST00000483591 SPINK5Q9NQ38 1064 aaPredicted RBP17.74■□□□□ 0.43
ATXN1-206ENST00000483591 CAPN15O75808 1086 aa17.64■□□□□ 0.41
ATXN1-206ENST00000483591 RB1CC1Q8TDY2 1594 aa17.42■□□□□ 0.38
ATXN1-206ENST00000483591 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.41■□□□□ 0.38
ATXN1-206ENST00000483591 HNRNPUL2Q1KMD3 747 aaKnown RBP17.41■□□□□ 0.38
ATXN1-206ENST00000483591 ATF5Q9Y2D1 282 aaPredicted RBP17.4■□□□□ 0.38
ATXN1-206ENST00000483591 SAMD1Q6SPF0 538 aaPredicted RBP17.39■□□□□ 0.37
ATXN1-206ENST00000483591 NACADO15069 1562 aa17.31■□□□□ 0.36
ATXN1-206ENST00000483591 FKBP8Q14318 412 aa17.27■□□□□ 0.36
ATXN1-206ENST00000483591 TRHP20396 242 aaPredicted RBP17.24■□□□□ 0.35
ATXN1-206ENST00000483591 ABCB7O75027 752 aa17.23■□□□□ 0.35
ATXN1-206ENST00000483591 ZNF219Q9P2Y4 722 aaPredicted RBP17.18■□□□□ 0.34
ATXN1-206ENST00000483591 DCAF8L2P0C7V8 631 aa17.16■□□□□ 0.34
ATXN1-206ENST00000483591 APLP2Q06481 763 aa17.12■□□□□ 0.33
ATXN1-206ENST00000483591 MYO15BQ96JP2 1530 aa17.09■□□□□ 0.33
ATXN1-206ENST00000483591 UNC13AQ9UPW8 1703 aa17.07■□□□□ 0.32
ATXN1-206ENST00000483591 PABPN1Q86U42 306 aaKnown RBP eCLIP17.06■□□□□ 0.32
ATXN1-206ENST00000483591 BICRAQ9NZM4 1560 aa17■□□□□ 0.31
ATXN1-206ENST00000483591 ZCCHC6Q5VYS8 1495 aaKnown RBP16.99■□□□□ 0.31
ATXN1-206ENST00000483591 DCAF1Q9Y4B6 1507 aa16.9■□□□□ 0.3
ATXN1-206ENST00000483591 RBM42Q9BTD8 480 aaKnown RBP16.86■□□□□ 0.29
ATXN1-206ENST00000483591 RTN4Q9NQC3 1192 aaKnown RBP16.86■□□□□ 0.29
ATXN1-206ENST00000483591 AMER1Q5JTC6 1135 aaPredicted RBP16.85■□□□□ 0.29
ATXN1-206ENST00000483591 CHRDL2Q6WN34 429 aa16.76■□□□□ 0.27
ATXN1-206ENST00000483591 SCRIBQ14160 1630 aa16.74■□□□□ 0.27
ATXN1-206ENST00000483591 SHROOM4Q9ULL8 1493 aa16.69■□□□□ 0.26
ATXN1-206ENST00000483591 POLA2Q14181 598 aa16.68■□□□□ 0.26
ATXN1-206ENST00000483591 MKRN4PQ13434 485 aaPredicted RBP16.67■□□□□ 0.26
ATXN1-206ENST00000483591 SPDYE4A6NLX3 237 aa16.6■□□□□ 0.25
ATXN1-206ENST00000483591 FBLN2P98095 1184 aa16.6■□□□□ 0.25
ATXN1-206ENST00000483591 CC2D2AQ9P2K1 1620 aa16.56■□□□□ 0.24
ATXN1-206ENST00000483591 EIF4G1Q04637 1599 aaKnown RBP16.53■□□□□ 0.24
ATXN1-206ENST00000483591 CECR2Q9BXF3 1484 aa16.5■□□□□ 0.23
ATXN1-206ENST00000483591 SP7Q8TDD2 431 aaPredicted RBP16.42■□□□□ 0.22
ATXN1-206ENST00000483591 FBXO3Q9UK99 471 aa16.41■□□□□ 0.22
ATXN1-206ENST00000483591 PROM2Q8N271 834 aa16.39■□□□□ 0.21
ATXN1-206ENST00000483591 AKT1S1Q96B36 256 aa16.39■□□□□ 0.21
ATXN1-206ENST00000483591 ZBTB12Q9Y330 459 aaPredicted RBP16.37■□□□□ 0.21
ATXN1-206ENST00000483591 SLC24A1O60721 1099 aa16.29■□□□□ 0.2
ATXN1-206ENST00000483591 PIP4P2Q8N4L2 257 aa16.27■□□□□ 0.2
ATXN1-206ENST00000483591 REM2Q8IYK8 340 aaPredicted RBP16.26■□□□□ 0.19
ATXN1-206ENST00000483591 VASPP50552 380 aaPredicted RBP16.21■□□□□ 0.19
ATXN1-206ENST00000483591 OSCARQ8IYS5 282 aa16.19■□□□□ 0.18
ATXN1-206ENST00000483591 PITPNM1O00562 1244 aa16.12■□□□□ 0.17
ATXN1-206ENST00000483591 FXR2P51116 673 aaKnown RBP eCLIP16.09■□□□□ 0.17
ATXN1-206ENST00000483591 HAX1O00165 279 aa16.05■□□□□ 0.16
ATXN1-206ENST00000483591 IFNLR1Q8IU57 520 aaPredicted RBP16.04■□□□□ 0.16
ATXN1-206ENST00000483591 ZNF692Q9BU19 519 aaPredicted RBP16.04■□□□□ 0.16
ATXN1-206ENST00000483591 NCAPD3P42695 1498 aa15.99■□□□□ 0.15
ATXN1-206ENST00000483591 SPDYE2BA6NHP3 402 aa15.99■□□□□ 0.15
ATXN1-206ENST00000483591 SPDYE6P0CI01 402 aa15.99■□□□□ 0.15
ATXN1-206ENST00000483591 SPDYE2Q495Y8 402 aa15.99■□□□□ 0.15
ATXN1-206ENST00000483591 ATAD2BQ9ULI0 1458 aa15.98■□□□□ 0.15
ATXN1-206ENST00000483591 SMARCA4P51532 1647 aa15.97■□□□□ 0.15
ATXN1-206ENST00000483591 SSUH2Q9Y2M2 353 aa15.95■□□□□ 0.14
ATXN1-206ENST00000483591 EVX2Q03828 476 aa15.93■□□□□ 0.14
ATXN1-206ENST00000483591 HMGXB3Q12766 1538 aa15.89■□□□□ 0.13
ATXN1-206ENST00000483591 SMARCA2P51531 1590 aa15.89■□□□□ 0.13
ATXN1-206ENST00000483591 BAZ1AQ9NRL2 1556 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms