RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 NISCHQ9Y2I1 1504 aa22.49■■□□□ 1.19
CTNNB1-201ENST00000349496 PELP1Q8IZL8 1130 aaKnown RBP21.69■■□□□ 1.06
CTNNB1-201ENST00000349496 MYT1Q01538 1121 aa21.31■■□□□ 1
CTNNB1-201ENST00000349496 SHROOM4Q9ULL8 1493 aa20.22■□□□□ 0.83
CTNNB1-201ENST00000349496 HRCP23327 699 aa20.19■□□□□ 0.82
CTNNB1-201ENST00000349496 TTBK1Q5TCY1 1321 aaPredicted RBP20.16■□□□□ 0.82
CTNNB1-201ENST00000349496 PPARGC1BQ86YN6 1023 aaKnown RBP19.98■□□□□ 0.79
CTNNB1-201ENST00000349496 DCAF8L2P0C7V8 631 aa19.86■□□□□ 0.77
CTNNB1-201ENST00000349496 PRKCSHP14314 528 aaPredicted RBP19.85■□□□□ 0.77
CTNNB1-201ENST00000349496 SCAF1Q9H7N4 1312 aaKnown RBP19.82■□□□□ 0.76
CTNNB1-201ENST00000349496 SUPT5HO00267 1087 aaKnown RBP19.81■□□□□ 0.76
CTNNB1-201ENST00000349496 BCL11AQ9H165 835 aa19.7■□□□□ 0.74
CTNNB1-201ENST00000349496 ERICH6Q7L0X2 663 aa19.68■□□□□ 0.74
CTNNB1-201ENST00000349496 PCGF6Q9BYE7 350 aa19.63■□□□□ 0.73
CTNNB1-201ENST00000349496 CENPBP07199 599 aaPredicted RBP19.46■□□□□ 0.71
CTNNB1-201ENST00000349496 FAM9AQ8IZU1 332 aaPredicted RBP19.34■□□□□ 0.69
CTNNB1-201ENST00000349496 GTF3C3Q9Y5Q9 886 aa19.22■□□□□ 0.67
CTNNB1-201ENST00000349496 ACIN1Q9UKV3 1341 aaKnown RBP19.08■□□□□ 0.64
CTNNB1-201ENST00000349496 SLC24A1O60721 1099 aa18.96■□□□□ 0.63
CTNNB1-201ENST00000349496 NEUROD1Q13562 356 aa18.96■□□□□ 0.63
CTNNB1-201ENST00000349496 APLP2Q06481 763 aa18.95■□□□□ 0.62
CTNNB1-201ENST00000349496 ZCCHC6Q5VYS8 1495 aaKnown RBP18.93■□□□□ 0.62
CTNNB1-201ENST00000349496 CHIC1Q5VXU3 224 aa18.83■□□□□ 0.6
CTNNB1-201ENST00000349496 ZEB1P37275 1124 aaPredicted RBP18.79■□□□□ 0.6
CTNNB1-201ENST00000349496 MYO15BQ96JP2 1530 aa18.78■□□□□ 0.6
CTNNB1-201ENST00000349496 ANP32EQ9BTT0 268 aa18.77■□□□□ 0.6
CTNNB1-201ENST00000349496 CCDC180Q9P1Z9 1646 aa18.75■□□□□ 0.59
CTNNB1-201ENST00000349496 EHMT2Q96KQ7 1210 aa18.74■□□□□ 0.59
CTNNB1-201ENST00000349496 LOC105371045A0A1W2PR82 267 aa18.7■□□□□ 0.58
CTNNB1-201ENST00000349496 CSRNP3Q8WYN3 585 aa18.64■□□□□ 0.57
CTNNB1-201ENST00000349496 YTHDC1Q96MU7 727 aaKnown RBP18.6■□□□□ 0.57
CTNNB1-201ENST00000349496 EIF5BO60841 1220 aaKnown RBP18.55■□□□□ 0.56
CTNNB1-201ENST00000349496 ANO8Q9HCE9 1232 aaPredicted RBP18.39■□□□□ 0.53
CTNNB1-201ENST00000349496 TRIM26Q12899 539 aaPredicted RBP18.32■□□□□ 0.52
CTNNB1-201ENST00000349496 ABCC9O60706 1549 aa18.29■□□□□ 0.52
CTNNB1-201ENST00000349496 DIEXFQ68CQ4 756 aaKnown RBP18.26■□□□□ 0.51
CTNNB1-201ENST00000349496 SCRIBQ14160 1630 aa18.24■□□□□ 0.51
CTNNB1-201ENST00000349496 CCDC136Q96JN2 1154 aa18.2■□□□□ 0.5
CTNNB1-201ENST00000349496 DAXXQ9UER7 740 aaPredicted RBP18.13■□□□□ 0.49
CTNNB1-201ENST00000349496 TRIM41Q8WV44 630 aa18.11■□□□□ 0.49
CTNNB1-201ENST00000349496 PLEKHG5O94827 1062 aa18.1■□□□□ 0.49
CTNNB1-201ENST00000349496 RSF1Q96T23 1441 aaPredicted RBP18.01■□□□□ 0.47
CTNNB1-201ENST00000349496 PODXL2Q9NZ53 605 aa17.99■□□□□ 0.47
CTNNB1-201ENST00000349496 SALL2Q9Y467 1007 aaPredicted RBP17.97■□□□□ 0.47
CTNNB1-201ENST00000349496 UBE2Q2Q8WVN8 375 aa17.96■□□□□ 0.47
CTNNB1-201ENST00000349496 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.96■□□□□ 0.47
CTNNB1-201ENST00000349496 CECR2Q9BXF3 1484 aa17.96■□□□□ 0.47
CTNNB1-201ENST00000349496 DCAF1Q9Y4B6 1507 aa17.95■□□□□ 0.46
CTNNB1-201ENST00000349496 TSHZ2Q9NRE2 1034 aa17.95■□□□□ 0.46
CTNNB1-201ENST00000349496 PKNOX2Q96KN3 472 aa17.92■□□□□ 0.46
CTNNB1-201ENST00000349496 CCER1Q8TC90 406 aaPredicted RBP17.92■□□□□ 0.46
CTNNB1-201ENST00000349496 RB1CC1Q8TDY2 1594 aa17.86■□□□□ 0.45
CTNNB1-201ENST00000349496 PABPN1Q86U42 306 aaKnown RBP eCLIP17.83■□□□□ 0.451e-9■□□□□ 10.5
CTNNB1-201ENST00000349496 BCANQ96GW7 911 aa17.81■□□□□ 0.44
CTNNB1-201ENST00000349496 RTN4Q9NQC3 1192 aaKnown RBP17.81■□□□□ 0.44
CTNNB1-201ENST00000349496 DEKP35659 375 aaKnown RBP17.77■□□□□ 0.43
CTNNB1-201ENST00000349496 MROH2BQ7Z745 1585 aa17.73■□□□□ 0.43
CTNNB1-201ENST00000349496 SUPT16HQ9Y5B9 1047 aaKnown RBP17.72■□□□□ 0.43
CTNNB1-201ENST00000349496 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.7■□□□□ 0.42
CTNNB1-201ENST00000349496 MYT1LQ9UL68 1186 aa17.67■□□□□ 0.42
CTNNB1-201ENST00000349496 RANGAP1P46060 587 aaPredicted RBP17.61■□□□□ 0.41
CTNNB1-201ENST00000349496 WIZO95785 1651 aa17.61■□□□□ 0.41
CTNNB1-201ENST00000349496 ERICH6BQ5W0A0 696 aa17.57■□□□□ 0.4
CTNNB1-201ENST00000349496 RBM19Q9Y4C8 960 aaKnown RBP17.56■□□□□ 0.4
CTNNB1-201ENST00000349496 GLIPR1L2Q4G1C9 344 aa17.56■□□□□ 0.4
CTNNB1-201ENST00000349496 NBR1Q14596 966 aa17.53■□□□□ 0.4
CTNNB1-201ENST00000349496 MIER1Q8N108 512 aa17.52■□□□□ 0.4
CTNNB1-201ENST00000349496 CLSPNQ9HAW4 1339 aa17.52■□□□□ 0.4
CTNNB1-201ENST00000349496 RTL5Q5HYW3 569 aaPredicted RBP17.5■□□□□ 0.39
CTNNB1-201ENST00000349496 NEFLP07196 543 aa17.49■□□□□ 0.39
CTNNB1-201ENST00000349496 A0A0U1RQG5 324 aaPredicted RBP17.49■□□□□ 0.39
CTNNB1-201ENST00000349496 ZNF316A6NFI3 1004 aaPredicted RBP17.45■□□□□ 0.38
CTNNB1-201ENST00000349496 ABCC8Q09428 1581 aa17.43■□□□□ 0.38
CTNNB1-201ENST00000349496 NACADO15069 1562 aa17.41■□□□□ 0.38
CTNNB1-201ENST00000349496 UBTFP17480 764 aaKnown RBP17.39■□□□□ 0.38
CTNNB1-201ENST00000349496 IL27Q8NEV9 243 aa17.36■□□□□ 0.37
CTNNB1-201ENST00000349496 VSIG10Q8N0Z9 540 aa17.36■□□□□ 0.37
CTNNB1-201ENST00000349496 FKBP8Q14318 412 aa17.35■□□□□ 0.37
CTNNB1-201ENST00000349496 CCDC88BA6NC98 1476 aa17.34■□□□□ 0.37
CTNNB1-201ENST00000349496 ITGAEP38570 1179 aa17.34■□□□□ 0.37
CTNNB1-201ENST00000349496 SOGA1O94964 1423 aa17.32■□□□□ 0.36
CTNNB1-201ENST00000349496 TIMELESSQ9UNS1 1208 aa17.31■□□□□ 0.36
CTNNB1-201ENST00000349496 RUSC2Q8N2Y8 1516 aa17.29■□□□□ 0.36
CTNNB1-201ENST00000349496 PDE4CQ08493 712 aa17.26■□□□□ 0.35
CTNNB1-201ENST00000349496 MSH5O43196 834 aa17.26■□□□□ 0.35
CTNNB1-201ENST00000349496 CDK11AQ9UQ88 783 aaPredicted RBP17.2■□□□□ 0.34
CTNNB1-201ENST00000349496 ZMYND15Q9H091 742 aa17.18■□□□□ 0.34
CTNNB1-201ENST00000349496 HNRNPUL2Q1KMD3 747 aaKnown RBP17.17■□□□□ 0.34
CTNNB1-201ENST00000349496 BAZ1AQ9NRL2 1556 aaPredicted RBP17.17■□□□□ 0.34
CTNNB1-201ENST00000349496 PDIA4P13667 645 aaKnown RBP17.1■□□□□ 0.33
CTNNB1-201ENST00000349496 AEBP2Q6ZN18 517 aaPredicted RBP17.08■□□□□ 0.32
CTNNB1-201ENST00000349496 SMARCA4P51532 1647 aa17.08■□□□□ 0.32
CTNNB1-201ENST00000349496 CEP162Q5TB80 1403 aa17.06■□□□□ 0.32
CTNNB1-201ENST00000349496 SMARCA2P51531 1590 aa17.05■□□□□ 0.32
CTNNB1-201ENST00000349496 TOP2AP11388 1531 aaKnown RBP17.02■□□□□ 0.32
CTNNB1-201ENST00000349496 UNC13AQ9UPW8 1703 aa17■□□□□ 0.31
CTNNB1-201ENST00000349496 BCL11BQ9C0K0 894 aaPredicted RBP16.99■□□□□ 0.31
CTNNB1-201ENST00000349496 FANCIQ9NVI1 1328 aa16.99■□□□□ 0.31
CTNNB1-201ENST00000349496 NOP58Q9Y2X3 529 aaKnown RBP16.97■□□□□ 0.31
CTNNB1-201ENST00000349496 EIF4G1Q04637 1599 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms