RNA–Protein interactions for RNA: ENST00000340124.8

GPT2-201, Transcript of glutamic--pyruvic transaminase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPT2, Length 3,984 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPT2-201ENST00000340124 NISCHQ9Y2I1 1504 aa26.43■■□□□ 1.82
GPT2-201ENST00000340124 DCAF8L2P0C7V8 631 aa26.15■■□□□ 1.78
GPT2-201ENST00000340124 SHROOM4Q9ULL8 1493 aa24.86■■□□□ 1.57
GPT2-201ENST00000340124 SUPT5HO00267 1087 aaKnown RBP24.58■■□□□ 1.53
GPT2-201ENST00000340124 EHMT2Q96KQ7 1210 aa23.81■■□□□ 1.4
GPT2-201ENST00000340124 FAM9AQ8IZU1 332 aaPredicted RBP23.17■■□□□ 1.3
GPT2-201ENST00000340124 ABCC9O60706 1549 aa23.11■■□□□ 1.29
GPT2-201ENST00000340124 PCGF6Q9BYE7 350 aa23.02■■□□□ 1.28
GPT2-201ENST00000340124 PABPN1Q86U42 306 aaKnown RBP eCLIP22.88■■□□□ 1.25
GPT2-201ENST00000340124 TTBK1Q5TCY1 1321 aaPredicted RBP22.73■■□□□ 1.23
GPT2-201ENST00000340124 RANGAP1P46060 587 aaPredicted RBP22.71■■□□□ 1.23
GPT2-201ENST00000340124 TRIM41Q8WV44 630 aa22.46■■□□□ 1.19
GPT2-201ENST00000340124 PPARGC1BQ86YN6 1023 aaKnown RBP22.44■■□□□ 1.18
GPT2-201ENST00000340124 HRCP23327 699 aa22.38■■□□□ 1.17
GPT2-201ENST00000340124 LOC105371045A0A1W2PR82 267 aa22.28■■□□□ 1.16
GPT2-201ENST00000340124 CHIC1Q5VXU3 224 aa22.13■■□□□ 1.13
GPT2-201ENST00000340124 UBTFP17480 764 aaKnown RBP22.02■■□□□ 1.12
GPT2-201ENST00000340124 ATP1B4Q9UN42 357 aaPredicted RBP21.97■■□□□ 1.11
GPT2-201ENST00000340124 ZCCHC6Q5VYS8 1495 aaKnown RBP21.87■■□□□ 1.09
GPT2-201ENST00000340124 SCRIBQ14160 1630 aa21.86■■□□□ 1.09
GPT2-201ENST00000340124 TRIM26Q12899 539 aaPredicted RBP21.77■■□□□ 1.07
GPT2-201ENST00000340124 APLP2Q06481 763 aa21.75■■□□□ 1.07
GPT2-201ENST00000340124 CCER1Q8TC90 406 aaPredicted RBP21.72■■□□□ 1.07
GPT2-201ENST00000340124 ZEB1P37275 1124 aaPredicted RBP21.65■■□□□ 1.06
GPT2-201ENST00000340124 YTHDC1Q96MU7 727 aaKnown RBP21.57■■□□□ 1.04
GPT2-201ENST00000340124 PELP1Q8IZL8 1130 aaKnown RBP21.53■■□□□ 1.04
GPT2-201ENST00000340124 CCDC180Q9P1Z9 1646 aa21.52■■□□□ 1.04
GPT2-201ENST00000340124 CENPBP07199 599 aaPredicted RBP21.46■■□□□ 1.03
GPT2-201ENST00000340124 ITGAEP38570 1179 aa21.42■■□□□ 1.02
GPT2-201ENST00000340124 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.39■■□□□ 1.01
GPT2-201ENST00000340124 CECR2Q9BXF3 1484 aa21.27■■□□□ 1
GPT2-201ENST00000340124 MYO15BQ96JP2 1530 aa21.27■■□□□ 1
GPT2-201ENST00000340124 HNRNPUL2Q1KMD3 747 aaKnown RBP21.25■□□□□ 0.99
GPT2-201ENST00000340124 FBLN2P98095 1184 aa21.23■□□□□ 0.99
GPT2-201ENST00000340124 ARID3CA6NKF2 412 aa21.21■□□□□ 0.99
GPT2-201ENST00000340124 P3H3Q8IVL6 736 aa21.21■□□□□ 0.99
GPT2-201ENST00000340124 RSF1Q96T23 1441 aaPredicted RBP21.16■□□□□ 0.98
GPT2-201ENST00000340124 GTF3C3Q9Y5Q9 886 aa21.08■□□□□ 0.96
GPT2-201ENST00000340124 DIEXFQ68CQ4 756 aaKnown RBP21.07■□□□□ 0.96
GPT2-201ENST00000340124 RB1CC1Q8TDY2 1594 aa21.04■□□□□ 0.96
GPT2-201ENST00000340124 SCAF1Q9H7N4 1312 aaKnown RBP20.99■□□□□ 0.95
GPT2-201ENST00000340124 CSRNP3Q8WYN3 585 aa20.96■□□□□ 0.95
GPT2-201ENST00000340124 NACADO15069 1562 aa20.9■□□□□ 0.94
GPT2-201ENST00000340124 ACIN1Q9UKV3 1341 aaKnown RBP20.84■□□□□ 0.93
GPT2-201ENST00000340124 NEUROD1Q13562 356 aa20.81■□□□□ 0.92
GPT2-201ENST00000340124 MROH2BQ7Z745 1585 aa20.79■□□□□ 0.92
GPT2-201ENST00000340124 MYT1LQ9UL68 1186 aa20.78■□□□□ 0.92
GPT2-201ENST00000340124 FAM50AQ14320 339 aaKnown RBP20.75■□□□□ 0.91
GPT2-201ENST00000340124 DCAF1Q9Y4B6 1507 aa20.74■□□□□ 0.91
GPT2-201ENST00000340124 CNGB1Q14028 1251 aaPredicted RBP20.73■□□□□ 0.91
GPT2-201ENST00000340124 MYT1Q01538 1121 aa20.68■□□□□ 0.9
GPT2-201ENST00000340124 BAZ1BQ9UIG0 1483 aaKnown RBP20.6■□□□□ 0.89
GPT2-201ENST00000340124 DNAJC5BQ9UF47 199 aa20.52■□□□□ 0.88
GPT2-201ENST00000340124 ZNF316A6NFI3 1004 aaPredicted RBP20.51■□□□□ 0.87
GPT2-201ENST00000340124 POLR3GLQ9BT43 218 aa20.5■□□□□ 0.87
GPT2-201ENST00000340124 BCANQ96GW7 911 aa20.49■□□□□ 0.87
GPT2-201ENST00000340124 WIZO95785 1651 aa20.46■□□□□ 0.87
GPT2-201ENST00000340124 ZNF777Q9ULD5 760 aaPredicted RBP20.45■□□□□ 0.86
GPT2-201ENST00000340124 BAZ1AQ9NRL2 1556 aaPredicted RBP20.44■□□□□ 0.86
GPT2-201ENST00000340124 ERICH6Q7L0X2 663 aa20.44■□□□□ 0.86
GPT2-201ENST00000340124 SOGA1O94964 1423 aa20.44■□□□□ 0.86
GPT2-201ENST00000340124 CCDC88BA6NC98 1476 aa20.43■□□□□ 0.86
GPT2-201ENST00000340124 NEFLP07196 543 aa20.43■□□□□ 0.86
GPT2-201ENST00000340124 ABCC8Q09428 1581 aa20.41■□□□□ 0.86
GPT2-201ENST00000340124 WRNQ14191 1432 aaPredicted RBP eCLIP20.41■□□□□ 0.86
GPT2-201ENST00000340124 TRIM52Q96A61 297 aa20.37■□□□□ 0.85
GPT2-201ENST00000340124 CHMP7Q8WUX9 453 aaPredicted RBP20.33■□□□□ 0.84
GPT2-201ENST00000340124 MIER1Q8N108 512 aa20.31■□□□□ 0.84
GPT2-201ENST00000340124 CHIC2Q9UKJ5 165 aa20.3■□□□□ 0.84
GPT2-201ENST00000340124 ZNF326Q5BKZ1 582 aaKnown RBP20.25■□□□□ 0.83
GPT2-201ENST00000340124 TDRD9Q8NDG6 1382 aaKnown RBP20.22■□□□□ 0.83
GPT2-201ENST00000340124 ATAD2BQ9ULI0 1458 aa20.18■□□□□ 0.82
GPT2-201ENST00000340124 SENP3Q9H4L4 574 aaPredicted RBP20.17■□□□□ 0.82
GPT2-201ENST00000340124 PLPPR3Q6T4P5 718 aa20.15■□□□□ 0.82
GPT2-201ENST00000340124 RUSC2Q8N2Y8 1516 aa20.14■□□□□ 0.82
GPT2-201ENST00000340124 KCNH8Q96L42 1107 aa20.14■□□□□ 0.81
GPT2-201ENST00000340124 CLIP1P30622 1438 aa20.13■□□□□ 0.81
GPT2-201ENST00000340124 ERCC6Q03468 1493 aa20.11■□□□□ 0.81
GPT2-201ENST00000340124 CEP162Q5TB80 1403 aa20.1■□□□□ 0.81
GPT2-201ENST00000340124 CUX2O14529 1486 aa20.05■□□□□ 0.8
GPT2-201ENST00000340124 HIRIP3Q9BW71 556 aaPredicted RBP20.03■□□□□ 0.8
GPT2-201ENST00000340124 SMARCA4P51532 1647 aa20■□□□□ 0.79
GPT2-201ENST00000340124 KIF27Q86VH2 1401 aa19.99■□□□□ 0.79
GPT2-201ENST00000340124 RRP7BPQ9NSQ0 103 aa19.98■□□□□ 0.79
GPT2-201ENST00000340124 CADPSQ9ULU8 1353 aa19.96■□□□□ 0.79
GPT2-201ENST00000340124 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.96■□□□□ 0.799e-9■■■□□ 16.1
GPT2-201ENST00000340124 KANK4Q5T7N3 995 aaPredicted RBP19.95■□□□□ 0.78
GPT2-201ENST00000340124 FKBP8Q14318 412 aa19.94■□□□□ 0.78
GPT2-201ENST00000340124 SLC4A1APQ9BWU0 796 aaKnown RBP19.93■□□□□ 0.78
GPT2-201ENST00000340124 CARMIL1Q5VZK9 1371 aa19.93■□□□□ 0.78
GPT2-201ENST00000340124 SMARCA2P51531 1590 aa19.9■□□□□ 0.78
GPT2-201ENST00000340124 TOP2AP11388 1531 aaKnown RBP19.9■□□□□ 0.78
GPT2-201ENST00000340124 MTUS2Q5JR59 1369 aa19.89■□□□□ 0.78
GPT2-201ENST00000340124 DDX10Q13206 875 aaKnown RBP19.89■□□□□ 0.77
GPT2-201ENST00000340124 GOLGA3Q08378 1498 aa19.89■□□□□ 0.77
GPT2-201ENST00000340124 NESP48681 1621 aa19.87■□□□□ 0.77
GPT2-201ENST00000340124 CDK11AQ9UQ88 783 aaPredicted RBP19.86■□□□□ 0.77
GPT2-201ENST00000340124 TNIKQ9UKE5 1360 aa19.83■□□□□ 0.76
GPT2-201ENST00000340124 EIF4G1Q04637 1599 aaKnown RBP19.8■□□□□ 0.76
GPT2-201ENST00000340124 NPM1P06748 294 aaKnown RBP eCLIP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms