RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 NISCHQ9Y2I1 1504 aa23.89■■□□□ 1.41
UBE2D3-205ENST00000350435 ABCC9O60706 1549 aa23.23■■□□□ 1.31
UBE2D3-205ENST00000350435 DNAJC5BQ9UF47 199 aa22.84■■□□□ 1.25
UBE2D3-205ENST00000350435 CCDC180Q9P1Z9 1646 aa22.06■■□□□ 1.12
UBE2D3-205ENST00000350435 DNAJC5Q9H3Z4 198 aa21.95■■□□□ 1.1
UBE2D3-205ENST00000350435 RB1CC1Q8TDY2 1594 aa21.6■■□□□ 1.05
UBE2D3-205ENST00000350435 PABPN1Q86U42 306 aaKnown RBP eCLIP21.4■■□□□ 1.02
UBE2D3-205ENST00000350435 UNC13AQ9UPW8 1703 aa21.15■□□□□ 0.98
UBE2D3-205ENST00000350435 NACADO15069 1562 aa21.11■□□□□ 0.97
UBE2D3-205ENST00000350435 CECR2Q9BXF3 1484 aa21.06■□□□□ 0.96
UBE2D3-205ENST00000350435 BICRAQ9NZM4 1560 aa20.96■□□□□ 0.95
UBE2D3-205ENST00000350435 CC2D2AQ9P2K1 1620 aa20.94■□□□□ 0.94
UBE2D3-205ENST00000350435 AEBP2Q6ZN18 517 aaPredicted RBP20.94■□□□□ 0.94
UBE2D3-205ENST00000350435 DCAF8L2P0C7V8 631 aa20.76■□□□□ 0.91
UBE2D3-205ENST00000350435 EIF4G1Q04637 1599 aaKnown RBP20.58■□□□□ 0.88
UBE2D3-205ENST00000350435 SHROOM4Q9ULL8 1493 aa20.57■□□□□ 0.88
UBE2D3-205ENST00000350435 CUX2O14529 1486 aa20.56■□□□□ 0.88
UBE2D3-205ENST00000350435 TRIM41Q8WV44 630 aa20.51■□□□□ 0.87
UBE2D3-205ENST00000350435 MYO15BQ96JP2 1530 aa20.37■□□□□ 0.85
UBE2D3-205ENST00000350435 CHIC1Q5VXU3 224 aa20.24■□□□□ 0.83
UBE2D3-205ENST00000350435 ERCC6Q03468 1493 aa20.19■□□□□ 0.82
UBE2D3-205ENST00000350435 SCRIBQ14160 1630 aa19.99■□□□□ 0.79
UBE2D3-205ENST00000350435 THOC2Q8NI27 1593 aaKnown RBP19.66■□□□□ 0.74
UBE2D3-205ENST00000350435 DCAF1Q9Y4B6 1507 aa19.65■□□□□ 0.74
UBE2D3-205ENST00000350435 NESP48681 1621 aa19.58■□□□□ 0.72
UBE2D3-205ENST00000350435 ZCCHC6Q5VYS8 1495 aaKnown RBP19.51■□□□□ 0.71
UBE2D3-205ENST00000350435 NCAPD3P42695 1498 aa19.47■□□□□ 0.71
UBE2D3-205ENST00000350435 SMARCA2P51531 1590 aa19.45■□□□□ 0.7
UBE2D3-205ENST00000350435 BAZ1AQ9NRL2 1556 aaPredicted RBP19.44■□□□□ 0.7
UBE2D3-205ENST00000350435 OSCARQ8IYS5 282 aa19.4■□□□□ 0.7
UBE2D3-205ENST00000350435 KIF21AQ7Z4S6 1674 aa19.36■□□□□ 0.69
UBE2D3-205ENST00000350435 RIMBP3CA6NJZ7 1639 aa19.33■□□□□ 0.68
UBE2D3-205ENST00000350435 RIMBP3BA6NNM3 1639 aa19.33■□□□□ 0.68
UBE2D3-205ENST00000350435 RIMBP3Q9UFD9 1639 aa19.33■□□□□ 0.68
UBE2D3-205ENST00000350435 LAMC3Q9Y6N6 1575 aa19.3■□□□□ 0.68
UBE2D3-205ENST00000350435 TRHP20396 242 aaPredicted RBP19.29■□□□□ 0.68
UBE2D3-205ENST00000350435 HMGXB3Q12766 1538 aa19.24■□□□□ 0.67
UBE2D3-205ENST00000350435 ATAD2BQ9ULI0 1458 aa19.22■□□□□ 0.67
UBE2D3-205ENST00000350435 PDS5BQ9NTI5 1447 aa19.21■□□□□ 0.67
UBE2D3-205ENST00000350435 MRC2Q9UBG0 1479 aa19.1■□□□□ 0.65
UBE2D3-205ENST00000350435 ARHGEF11O15085 1522 aa19.1■□□□□ 0.65
UBE2D3-205ENST00000350435 WDR62O43379 1518 aa19.09■□□□□ 0.65
UBE2D3-205ENST00000350435 CYB5RLQ6IPT4 315 aa19.03■□□□□ 0.64
UBE2D3-205ENST00000350435 ILDR1Q86SU0 546 aaPredicted RBP19.02■□□□□ 0.64
UBE2D3-205ENST00000350435 BAZ1BQ9UIG0 1483 aaKnown RBP19.02■□□□□ 0.63
UBE2D3-205ENST00000350435 SMARCA4P51532 1647 aa18.93■□□□□ 0.62
UBE2D3-205ENST00000350435 CADPSQ9ULU8 1353 aa18.82■□□□□ 0.6
UBE2D3-205ENST00000350435 ARAP1Q96P48 1450 aa18.8■□□□□ 0.6
UBE2D3-205ENST00000350435 CEP164Q9UPV0 1460 aa18.79■□□□□ 0.6
UBE2D3-205ENST00000350435 PEG3Q9GZU2 1588 aa18.73■□□□□ 0.59
UBE2D3-205ENST00000350435 FANCD2Q9BXW9 1451 aa18.64■□□□□ 0.57
UBE2D3-205ENST00000350435 RSF1Q96T23 1441 aaPredicted RBP18.57■□□□□ 0.56
UBE2D3-205ENST00000350435 CHD1O14646 1710 aa18.55■□□□□ 0.56
UBE2D3-205ENST00000350435 URB2Q14146 1524 aaKnown RBP18.54■□□□□ 0.56
UBE2D3-205ENST00000350435 ZNF608Q9ULD9 1512 aaPredicted RBP18.51■□□□□ 0.55
UBE2D3-205ENST00000350435 IFT140Q96RY7 1462 aa18.45■□□□□ 0.54
UBE2D3-205ENST00000350435 EIF4G3O43432 1585 aaKnown RBP18.4■□□□□ 0.54
UBE2D3-205ENST00000350435 FBLN2P98095 1184 aa18.38■□□□□ 0.53
UBE2D3-205ENST00000350435 MROH2BQ7Z745 1585 aa18.38■□□□□ 0.53
UBE2D3-205ENST00000350435 CFTRP13569 1480 aa18.33■□□□□ 0.53
UBE2D3-205ENST00000350435 KDM4FA0A1W2PPD8 638 aa18.25■□□□□ 0.51
UBE2D3-205ENST00000350435 CLASP1Q7Z460 1538 aa18.23■□□□□ 0.51
UBE2D3-205ENST00000350435 AQRO60306 1485 aaKnown RBP eCLIP18.2■□□□□ 0.52e-7■■■□□ 15.8
UBE2D3-205ENST00000350435 PRDM2Q13029 1718 aa18.19■□□□□ 0.5
UBE2D3-205ENST00000350435 SYNJ1O43426 1573 aa18.16■□□□□ 0.5
UBE2D3-205ENST00000350435 ERCC6L2Q5T890 1561 aa18.16■□□□□ 0.5
UBE2D3-205ENST00000350435 GAPVD1Q14C86 1478 aa18.15■□□□□ 0.5
UBE2D3-205ENST00000350435 KIF13AQ9H1H9 1805 aa18.15■□□□□ 0.5
UBE2D3-205ENST00000350435 WIZO95785 1651 aa18.15■□□□□ 0.5
UBE2D3-205ENST00000350435 TOPBP1Q92547 1522 aa18.13■□□□□ 0.49
UBE2D3-205ENST00000350435 FBXO41Q8TF61 875 aa18.1■□□□□ 0.49
UBE2D3-205ENST00000350435 TARBP1Q13395 1621 aaKnown RBP18.09■□□□□ 0.49
UBE2D3-205ENST00000350435 LMTK3Q96Q04 1460 aa18.05■□□□□ 0.48
UBE2D3-205ENST00000350435 ABCC8Q09428 1581 aa18.04■□□□□ 0.48
UBE2D3-205ENST00000350435 CHMP7Q8WUX9 453 aaPredicted RBP18.03■□□□□ 0.48
UBE2D3-205ENST00000350435 HECW2Q9P2P5 1572 aa18.03■□□□□ 0.48
UBE2D3-205ENST00000350435 SNAPC4Q5SXM2 1469 aa17.99■□□□□ 0.47
UBE2D3-205ENST00000350435 DNMBPQ6XZF7 1577 aa17.98■□□□□ 0.47
UBE2D3-205ENST00000350435 KDM6BO15054 1643 aa17.96■□□□□ 0.47
UBE2D3-205ENST00000350435 SOCS7O14512 581 aa17.92■□□□□ 0.46
UBE2D3-205ENST00000350435 SENP3Q9H4L4 574 aaPredicted RBP17.9■□□□□ 0.46
UBE2D3-205ENST00000350435 MAGI1Q96QZ7 1491 aaPredicted RBP17.89■□□□□ 0.45
UBE2D3-205ENST00000350435 TDRD9Q8NDG6 1382 aaKnown RBP17.88■□□□□ 0.45
UBE2D3-205ENST00000350435 POLA1P09884 1462 aaPredicted RBP17.86■□□□□ 0.45
UBE2D3-205ENST00000350435 SYNJ2O15056 1496 aa17.85■□□□□ 0.45
UBE2D3-205ENST00000350435 FAM69CQ0P6D2 419 aa17.85■□□□□ 0.45
UBE2D3-205ENST00000350435 WDR97A6NE52 1622 aa17.84■□□□□ 0.45
UBE2D3-205ENST00000350435 ADGRL1O94910 1474 aa17.84■□□□□ 0.45
UBE2D3-205ENST00000350435 RAD54L2Q9Y4B4 1467 aa17.81■□□□□ 0.44
UBE2D3-205ENST00000350435 TOP2AP11388 1531 aaKnown RBP17.8■□□□□ 0.44
UBE2D3-205ENST00000350435 ABCC10Q5T3U5 1492 aa17.8■□□□□ 0.44
UBE2D3-205ENST00000350435 TSPOAP1O95153 1857 aa17.78■□□□□ 0.44
UBE2D3-205ENST00000350435 SOGA1O94964 1423 aa17.77■□□□□ 0.44
UBE2D3-205ENST00000350435 GRIN2BQ13224 1484 aa17.76■□□□□ 0.43
UBE2D3-205ENST00000350435 ILDR2Q71H61 639 aa17.76■□□□□ 0.43
UBE2D3-205ENST00000350435 DIP2BQ9P265 1576 aa17.74■□□□□ 0.43
UBE2D3-205ENST00000350435 PHF23Q9BUL5 403 aaPredicted RBP17.73■□□□□ 0.43
UBE2D3-205ENST00000350435 CEP170Q5SW79 1584 aa17.71■□□□□ 0.43
UBE2D3-205ENST00000350435 DISP3Q9P2K9 1392 aa17.68■□□□□ 0.42
UBE2D3-205ENST00000350435 PBRM1Q86U86 1689 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms