RNA–Protein interactions for RNA: ENST00000392645.6

ATXN2-204, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 2,842 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-204ENST00000392645 NISCHQ9Y2I1 1504 aa30.24■■■□□ 2.43
ATXN2-204ENST00000392645 SHROOM4Q9ULL8 1493 aa26.43■■□□□ 1.82
ATXN2-204ENST00000392645 DCAF8L2P0C7V8 631 aa26.17■■□□□ 1.78
ATXN2-204ENST00000392645 SUPT5HO00267 1087 aaKnown RBP25.73■■□□□ 1.71
ATXN2-204ENST00000392645 CCDC180Q9P1Z9 1646 aa25.49■■□□□ 1.67
ATXN2-204ENST00000392645 ZCCHC6Q5VYS8 1495 aaKnown RBP25.44■■□□□ 1.66
ATXN2-204ENST00000392645 ABCC9O60706 1549 aa24.73■■□□□ 1.55
ATXN2-204ENST00000392645 SCRIBQ14160 1630 aa24.51■■□□□ 1.51
ATXN2-204ENST00000392645 CHIC1Q5VXU3 224 aa24.46■■□□□ 1.51
ATXN2-204ENST00000392645 DCAF1Q9Y4B6 1507 aa24.38■■□□□ 1.49
ATXN2-204ENST00000392645 MYO15BQ96JP2 1530 aa24.35■■□□□ 1.49
ATXN2-204ENST00000392645 EHMT2Q96KQ7 1210 aa24.11■■□□□ 1.45
ATXN2-204ENST00000392645 LOC105371045A0A1W2PR82 267 aa24.1■■□□□ 1.45
ATXN2-204ENST00000392645 RSF1Q96T23 1441 aaPredicted RBP23.96■■□□□ 1.43
ATXN2-204ENST00000392645 CECR2Q9BXF3 1484 aa23.95■■□□□ 1.42
ATXN2-204ENST00000392645 FAM9AQ8IZU1 332 aaPredicted RBP23.94■■□□□ 1.42
ATXN2-204ENST00000392645 PABPN1Q86U42 306 aaKnown RBP eCLIP23.83■■□□□ 1.41
ATXN2-204ENST00000392645 NACADO15069 1562 aa23.78■■□□□ 1.4
ATXN2-204ENST00000392645 RB1CC1Q8TDY2 1594 aa23.76■■□□□ 1.39
ATXN2-204ENST00000392645 MROH2BQ7Z745 1585 aa23.7■■□□□ 1.38
ATXN2-204ENST00000392645 TRIM41Q8WV44 630 aa23.7■■□□□ 1.38
ATXN2-204ENST00000392645 PCGF6Q9BYE7 350 aa23.69■■□□□ 1.38
ATXN2-204ENST00000392645 WIZO95785 1651 aa23.59■■□□□ 1.37
ATXN2-204ENST00000392645 PPARGC1BQ86YN6 1023 aaKnown RBP23.36■■□□□ 1.33
ATXN2-204ENST00000392645 UNC13AQ9UPW8 1703 aa23.33■■□□□ 1.32
ATXN2-204ENST00000392645 BAZ1AQ9NRL2 1556 aaPredicted RBP23.18■■□□□ 1.3
ATXN2-204ENST00000392645 TTBK1Q5TCY1 1321 aaPredicted RBP23.16■■□□□ 1.3
ATXN2-204ENST00000392645 ABCC8Q09428 1581 aa23.11■■□□□ 1.29
ATXN2-204ENST00000392645 SMARCA4P51532 1647 aa23.09■■□□□ 1.29
ATXN2-204ENST00000392645 HRCP23327 699 aa23.08■■□□□ 1.28
ATXN2-204ENST00000392645 CCDC88BA6NC98 1476 aa23.06■■□□□ 1.28
ATXN2-204ENST00000392645 BICRAQ9NZM4 1560 aa23.06■■□□□ 1.28
ATXN2-204ENST00000392645 TOP2AP11388 1531 aaKnown RBP22.92■■□□□ 1.26
ATXN2-204ENST00000392645 TRIM26Q12899 539 aaPredicted RBP22.9■■□□□ 1.26
ATXN2-204ENST00000392645 SMARCA2P51531 1590 aa22.89■■□□□ 1.25
ATXN2-204ENST00000392645 RANGAP1P46060 587 aaPredicted RBP22.88■■□□□ 1.25
ATXN2-204ENST00000392645 SOGA1O94964 1423 aa22.82■■□□□ 1.24
ATXN2-204ENST00000392645 RUSC2Q8N2Y8 1516 aa22.79■■□□□ 1.24
ATXN2-204ENST00000392645 EIF4G1Q04637 1599 aaKnown RBP22.75■■□□□ 1.23
ATXN2-204ENST00000392645 UBTFP17480 764 aaKnown RBP22.74■■□□□ 1.23
ATXN2-204ENST00000392645 ATAD2BQ9ULI0 1458 aa22.66■■□□□ 1.22
ATXN2-204ENST00000392645 BAZ1BQ9UIG0 1483 aaKnown RBP22.64■■□□□ 1.22
ATXN2-204ENST00000392645 CSRNP3Q8WYN3 585 aa22.57■■□□□ 1.2
ATXN2-204ENST00000392645 WRNQ14191 1432 aaPredicted RBP eCLIP22.53■■□□□ 1.2
ATXN2-204ENST00000392645 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.49■■□□□ 1.19
ATXN2-204ENST00000392645 SYNJ1O43426 1573 aa22.44■■□□□ 1.18
ATXN2-204ENST00000392645 CEP162Q5TB80 1403 aa22.42■■□□□ 1.18
ATXN2-204ENST00000392645 PEG3Q9GZU2 1588 aa22.37■■□□□ 1.17
ATXN2-204ENST00000392645 CCER1Q8TC90 406 aaPredicted RBP22.26■■□□□ 1.15
ATXN2-204ENST00000392645 TNIKQ9UKE5 1360 aa22.21■■□□□ 1.15
ATXN2-204ENST00000392645 RAPGEF2Q9Y4G8 1499 aa22.19■■□□□ 1.14
ATXN2-204ENST00000392645 HNRNPUL2Q1KMD3 747 aaKnown RBP22.18■■□□□ 1.14
ATXN2-204ENST00000392645 GOLGA3Q08378 1498 aa22.17■■□□□ 1.14
ATXN2-204ENST00000392645 DNAJC5BQ9UF47 199 aa22.16■■□□□ 1.14
ATXN2-204ENST00000392645 NCAPD3P42695 1498 aa22.11■■□□□ 1.13
ATXN2-204ENST00000392645 CLIP1P30622 1438 aa22.07■■□□□ 1.12
ATXN2-204ENST00000392645 EEA1Q15075 1411 aa22.07■■□□□ 1.12
ATXN2-204ENST00000392645 CEP164Q9UPV0 1460 aa22.04■■□□□ 1.12
ATXN2-204ENST00000392645 CUX1P39880 1505 aa22.03■■□□□ 1.12
ATXN2-204ENST00000392645 APLP2Q06481 763 aa22■■□□□ 1.11
ATXN2-204ENST00000392645 TOP2BQ02880 1626 aa21.98■■□□□ 1.11
ATXN2-204ENST00000392645 ZEB1P37275 1124 aaPredicted RBP21.98■■□□□ 1.11
ATXN2-204ENST00000392645 CC2D2AQ9P2K1 1620 aa21.97■■□□□ 1.11
ATXN2-204ENST00000392645 HMGXB3Q12766 1538 aa21.96■■□□□ 1.11
ATXN2-204ENST00000392645 P3H3Q8IVL6 736 aa21.95■■□□□ 1.1
ATXN2-204ENST00000392645 NESP48681 1621 aa21.92■■□□□ 1.1
ATXN2-204ENST00000392645 CFTRP13569 1480 aa21.92■■□□□ 1.1
ATXN2-204ENST00000392645 ATP1B4Q9UN42 357 aaPredicted RBP21.89■■□□□ 1.1
ATXN2-204ENST00000392645 ITGAEP38570 1179 aa21.88■■□□□ 1.09
ATXN2-204ENST00000392645 KANK4Q5T7N3 995 aaPredicted RBP21.87■■□□□ 1.09
ATXN2-204ENST00000392645 CADPSQ9ULU8 1353 aa21.85■■□□□ 1.09
ATXN2-204ENST00000392645 KIF21BO75037 1637 aa21.85■■□□□ 1.09
ATXN2-204ENST00000392645 CUX2O14529 1486 aa21.84■■□□□ 1.09
ATXN2-204ENST00000392645 KIF27Q86VH2 1401 aa21.81■■□□□ 1.08
ATXN2-204ENST00000392645 BIVM-ERCC5R4GMW8 1640 aa21.8■■□□□ 1.08
ATXN2-204ENST00000392645 VPS8Q8N3P4 1428 aa21.79■■□□□ 1.08
ATXN2-204ENST00000392645 RAD54L2Q9Y4B4 1467 aa21.75■■□□□ 1.07
ATXN2-204ENST00000392645 FGD5Q6ZNL6 1462 aa21.74■■□□□ 1.07
ATXN2-204ENST00000392645 PRXQ9BXM0 1461 aa21.73■■□□□ 1.07
ATXN2-204ENST00000392645 ARAP1Q96P48 1450 aa21.71■■□□□ 1.07
ATXN2-204ENST00000392645 FANCD2Q9BXW9 1451 aa21.7■■□□□ 1.06
ATXN2-204ENST00000392645 IGF1RP08069 1367 aa21.69■■□□□ 1.06
ATXN2-204ENST00000392645 CARMIL1Q5VZK9 1371 aa21.62■■□□□ 1.05
ATXN2-204ENST00000392645 TDRD9Q8NDG6 1382 aaKnown RBP21.59■■□□□ 1.05
ATXN2-204ENST00000392645 ARHGAP35Q9NRY4 1499 aa21.56■■□□□ 1.04
ATXN2-204ENST00000392645 ARID3CA6NKF2 412 aa21.54■■□□□ 1.04
ATXN2-204ENST00000392645 DIEXFQ68CQ4 756 aaKnown RBP21.52■■□□□ 1.04
ATXN2-204ENST00000392645 ERICH3Q5RHP9 1530 aa21.52■■□□□ 1.04
ATXN2-204ENST00000392645 POLA1P09884 1462 aaPredicted RBP21.49■■□□□ 1.03
ATXN2-204ENST00000392645 TOPBP1Q92547 1522 aa21.47■■□□□ 1.03
ATXN2-204ENST00000392645 FAM50AQ14320 339 aaKnown RBP21.47■■□□□ 1.03
ATXN2-204ENST00000392645 FHOD3Q2V2M9 1422 aa21.45■■□□□ 1.02
ATXN2-204ENST00000392645 PRDM2Q13029 1718 aa21.44■■□□□ 1.02
ATXN2-204ENST00000392645 YTHDC1Q96MU7 727 aaKnown RBP21.43■■□□□ 1.02
ATXN2-204ENST00000392645 URB2Q14146 1524 aaKnown RBP21.41■■□□□ 1.02
ATXN2-204ENST00000392645 DNMBPQ6XZF7 1577 aa21.34■■□□□ 1.01
ATXN2-204ENST00000392645 ZNF316A6NFI3 1004 aaPredicted RBP21.33■■□□□ 1
ATXN2-204ENST00000392645 CCNB3Q8WWL7 1395 aa21.28■■□□□ 1
ATXN2-204ENST00000392645 KIF21AQ7Z4S6 1674 aa21.27■■□□□ 1
ATXN2-204ENST00000392645 PHLDB1Q86UU1 1377 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms