RNA–Protein interactions for RNA: ENST00000453024.5

CTNNB1-210, Transcript of catenin beta 1, humanhuman

TSL 2 BASIC

Gene CTNNB1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-210ENST00000453024 NISCHQ9Y2I1 1504 aa30.23■■■□□ 2.43
CTNNB1-210ENST00000453024 HRCP23327 699 aa28.44■■■□□ 2.14
CTNNB1-210ENST00000453024 PELP1Q8IZL8 1130 aaKnown RBP27.99■■■□□ 2.07
CTNNB1-210ENST00000453024 PPARGC1BQ86YN6 1023 aaKnown RBP27.87■■■□□ 2.05
CTNNB1-210ENST00000453024 PCGF6Q9BYE7 350 aa27.63■■■□□ 2.01
CTNNB1-210ENST00000453024 MYO15BQ96JP2 1530 aa27.32■■□□□ 1.96
CTNNB1-210ENST00000453024 SUPT5HO00267 1087 aaKnown RBP27.25■■□□□ 1.95
CTNNB1-210ENST00000453024 SHROOM4Q9ULL8 1493 aa27.19■■□□□ 1.94
CTNNB1-210ENST00000453024 SCAF1Q9H7N4 1312 aaKnown RBP27.17■■□□□ 1.94
CTNNB1-210ENST00000453024 MYT1Q01538 1121 aa26.99■■□□□ 1.91
CTNNB1-210ENST00000453024 CHIC1Q5VXU3 224 aa26.99■■□□□ 1.91
CTNNB1-210ENST00000453024 DCAF1Q9Y4B6 1507 aa26.79■■□□□ 1.88
CTNNB1-210ENST00000453024 TRIM26Q12899 539 aaPredicted RBP26.61■■□□□ 1.85
CTNNB1-210ENST00000453024 CCDC180Q9P1Z9 1646 aa26.53■■□□□ 1.84
CTNNB1-210ENST00000453024 ZEB1P37275 1124 aaPredicted RBP26.5■■□□□ 1.83
CTNNB1-210ENST00000453024 LOC105371045A0A1W2PR82 267 aa26.43■■□□□ 1.82
CTNNB1-210ENST00000453024 ACIN1Q9UKV3 1341 aaKnown RBP26.33■■□□□ 1.81
CTNNB1-210ENST00000453024 NEUROD1Q13562 356 aa26.26■■□□□ 1.79
CTNNB1-210ENST00000453024 GTF3C3Q9Y5Q9 886 aa26.15■■□□□ 1.78
CTNNB1-210ENST00000453024 CENPBP07199 599 aaPredicted RBP25.88■■□□□ 1.73
CTNNB1-210ENST00000453024 ZCCHC6Q5VYS8 1495 aaKnown RBP25.8■■□□□ 1.72
CTNNB1-210ENST00000453024 DIEXFQ68CQ4 756 aaKnown RBP25.64■■□□□ 1.7
CTNNB1-210ENST00000453024 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.47■■□□□ 1.67
CTNNB1-210ENST00000453024 TTBK1Q5TCY1 1321 aaPredicted RBP25.43■■□□□ 1.66
CTNNB1-210ENST00000453024 CCER1Q8TC90 406 aaPredicted RBP25.4■■□□□ 1.66
CTNNB1-210ENST00000453024 BCL11AQ9H165 835 aa25.31■■□□□ 1.64
CTNNB1-210ENST00000453024 YTHDC1Q96MU7 727 aaKnown RBP25.28■■□□□ 1.64
CTNNB1-210ENST00000453024 TRIM41Q8WV44 630 aa25.24■■□□□ 1.63
CTNNB1-210ENST00000453024 FAM9AQ8IZU1 332 aaPredicted RBP25.21■■□□□ 1.63
CTNNB1-210ENST00000453024 DCAF8L2P0C7V8 631 aa25.15■■□□□ 1.62
CTNNB1-210ENST00000453024 EHMT2Q96KQ7 1210 aa25.13■■□□□ 1.61
CTNNB1-210ENST00000453024 ANP32EQ9BTT0 268 aa25.05■■□□□ 1.6
CTNNB1-210ENST00000453024 ZNF316A6NFI3 1004 aaPredicted RBP25.04■■□□□ 1.6
CTNNB1-210ENST00000453024 MIER1Q8N108 512 aa24.97■■□□□ 1.59
CTNNB1-210ENST00000453024 CSRNP3Q8WYN3 585 aa24.82■■□□□ 1.56
CTNNB1-210ENST00000453024 TSHZ2Q9NRE2 1034 aa24.81■■□□□ 1.56
CTNNB1-210ENST00000453024 SUPT16HQ9Y5B9 1047 aaKnown RBP24.79■■□□□ 1.56
CTNNB1-210ENST00000453024 CLSPNQ9HAW4 1339 aa24.64■■□□□ 1.54
CTNNB1-210ENST00000453024 ABCC9O60706 1549 aa24.6■■□□□ 1.53
CTNNB1-210ENST00000453024 PRKCSHP14314 528 aaPredicted RBP24.57■■□□□ 1.52
CTNNB1-210ENST00000453024 RSF1Q96T23 1441 aaPredicted RBP24.54■■□□□ 1.52
CTNNB1-210ENST00000453024 RB1CC1Q8TDY2 1594 aa24.53■■□□□ 1.52
CTNNB1-210ENST00000453024 WRNQ14191 1432 aaPredicted RBP eCLIP24.38■■□□□ 1.49
CTNNB1-210ENST00000453024 BCANQ96GW7 911 aa24.2■■□□□ 1.46
CTNNB1-210ENST00000453024 RBM19Q9Y4C8 960 aaKnown RBP24.17■■□□□ 1.46
CTNNB1-210ENST00000453024 CEP162Q5TB80 1403 aa24.17■■□□□ 1.46
CTNNB1-210ENST00000453024 HNRNPUL2Q1KMD3 747 aaKnown RBP24.15■■□□□ 1.46
CTNNB1-210ENST00000453024 MSH5O43196 834 aa24.04■■□□□ 1.44
CTNNB1-210ENST00000453024 FKBP8Q14318 412 aa24.03■■□□□ 1.44
CTNNB1-210ENST00000453024 TNIKQ9UKE5 1360 aa23.95■■□□□ 1.42
CTNNB1-210ENST00000453024 KCNH8Q96L42 1107 aa23.95■■□□□ 1.42
CTNNB1-210ENST00000453024 ERICH6Q7L0X2 663 aa23.94■■□□□ 1.42
CTNNB1-210ENST00000453024 SCRIBQ14160 1630 aa23.89■■□□□ 1.41
CTNNB1-210ENST00000453024 ITGAEP38570 1179 aa23.84■■□□□ 1.41
CTNNB1-210ENST00000453024 UBTFP17480 764 aaKnown RBP23.79■■□□□ 1.4
CTNNB1-210ENST00000453024 CCDC88BA6NC98 1476 aa23.78■■□□□ 1.4
CTNNB1-210ENST00000453024 EIF4G1Q04637 1599 aaKnown RBP23.77■■□□□ 1.4
CTNNB1-210ENST00000453024 ABCC8Q09428 1581 aa23.77■■□□□ 1.4
CTNNB1-210ENST00000453024 NEFLP07196 543 aa23.74■■□□□ 1.39
CTNNB1-210ENST00000453024 SOGA1O94964 1423 aa23.74■■□□□ 1.39
CTNNB1-210ENST00000453024 FANCIQ9NVI1 1328 aa23.73■■□□□ 1.39
CTNNB1-210ENST00000453024 ANO8Q9HCE9 1232 aaPredicted RBP23.72■■□□□ 1.39
CTNNB1-210ENST00000453024 DHX57Q6P158 1386 aaKnown RBP23.71■■□□□ 1.39
CTNNB1-210ENST00000453024 CECR2Q9BXF3 1484 aa23.7■■□□□ 1.39
CTNNB1-210ENST00000453024 MROH2BQ7Z745 1585 aa23.7■■□□□ 1.38
CTNNB1-210ENST00000453024 DEKP35659 375 aaKnown RBP23.69■■□□□ 1.38
CTNNB1-210ENST00000453024 APLP2Q06481 763 aa23.68■■□□□ 1.38
CTNNB1-210ENST00000453024 WIZO95785 1651 aa23.65■■□□□ 1.38
CTNNB1-210ENST00000453024 MYT1LQ9UL68 1186 aa23.63■■□□□ 1.37
CTNNB1-210ENST00000453024 RUSC2Q8N2Y8 1516 aa23.59■■□□□ 1.37
CTNNB1-210ENST00000453024 GOLGA3Q08378 1498 aa23.56■■□□□ 1.36
CTNNB1-210ENST00000453024 EEA1Q15075 1411 aa23.52■■□□□ 1.36
CTNNB1-210ENST00000453024 TRIM52Q96A61 297 aa23.5■■□□□ 1.35
CTNNB1-210ENST00000453024 CDK11AQ9UQ88 783 aaPredicted RBP23.48■■□□□ 1.35
CTNNB1-210ENST00000453024 CLIP1P30622 1438 aa23.47■■□□□ 1.35
CTNNB1-210ENST00000453024 SALL2Q9Y467 1007 aaPredicted RBP23.46■■□□□ 1.35
CTNNB1-210ENST00000453024 BAZ1AQ9NRL2 1556 aaPredicted RBP23.45■■□□□ 1.34
CTNNB1-210ENST00000453024 VPS8Q8N3P4 1428 aa23.45■■□□□ 1.34
CTNNB1-210ENST00000453024 DDX10Q13206 875 aaKnown RBP23.43■■□□□ 1.34
CTNNB1-210ENST00000453024 ERICH6BQ5W0A0 696 aa23.33■■□□□ 1.33
CTNNB1-210ENST00000453024 IRX6P78412 446 aaPredicted RBP23.32■■□□□ 1.32
CTNNB1-210ENST00000453024 NBR1Q14596 966 aa23.32■■□□□ 1.32
CTNNB1-210ENST00000453024 CCDC136Q96JN2 1154 aa23.32■■□□□ 1.32
CTNNB1-210ENST00000453024 NACADO15069 1562 aa23.31■■□□□ 1.32
CTNNB1-210ENST00000453024 CCER2I3L3R5 266 aa23.28■■□□□ 1.32
CTNNB1-210ENST00000453024 PPP1R15AO75807 674 aaPredicted RBP23.28■■□□□ 1.32
CTNNB1-210ENST00000453024 CEP164Q9UPV0 1460 aa23.26■■□□□ 1.31
CTNNB1-210ENST00000453024 NOP58Q9Y2X3 529 aaKnown RBP23.23■■□□□ 1.31
CTNNB1-210ENST00000453024 PAK3O75914 559 aaPredicted RBP23.2■■□□□ 1.3
CTNNB1-210ENST00000453024 RANGAP1P46060 587 aaPredicted RBP23.2■■□□□ 1.3
CTNNB1-210ENST00000453024 KIF21BO75037 1637 aa23.19■■□□□ 1.3
CTNNB1-210ENST00000453024 ANP32CO43423 234 aa23.18■■□□□ 1.3
CTNNB1-210ENST00000453024 IL27Q8NEV9 243 aa23.18■■□□□ 1.3
CTNNB1-210ENST00000453024 CUX2O14529 1486 aa23.14■■□□□ 1.3
CTNNB1-210ENST00000453024 UBE2Q2Q8WVN8 375 aa23.14■■□□□ 1.29
CTNNB1-210ENST00000453024 WDR97A6NE52 1622 aa23.13■■□□□ 1.29
CTNNB1-210ENST00000453024 TOP2AP11388 1531 aaKnown RBP23.12■■□□□ 1.29
CTNNB1-210ENST00000453024 HIRIP3Q9BW71 556 aaPredicted RBP23.12■■□□□ 1.29
CTNNB1-210ENST00000453024 RTN4Q9NQC3 1192 aaKnown RBP23.12■■□□□ 1.29
CTNNB1-210ENST00000453024 SMARCA2P51531 1590 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms