RNA–Protein interactions for RNA: ENST00000550104.5

ATXN2-219, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-219ENST00000550104 NISCHQ9Y2I1 1504 aa32.43■■■□□ 2.78
ATXN2-219ENST00000550104 DCAF8L2P0C7V8 631 aa29.98■■■□□ 2.39
ATXN2-219ENST00000550104 SHROOM4Q9ULL8 1493 aa29.33■■■□□ 2.29
ATXN2-219ENST00000550104 SUPT5HO00267 1087 aaKnown RBP29.15■■■□□ 2.26
ATXN2-219ENST00000550104 EHMT2Q96KQ7 1210 aa27.46■■□□□ 1.99
ATXN2-219ENST00000550104 FAM9AQ8IZU1 332 aaPredicted RBP27.22■■□□□ 1.95
ATXN2-219ENST00000550104 ZCCHC6Q5VYS8 1495 aaKnown RBP27.13■■□□□ 1.93
ATXN2-219ENST00000550104 CHIC1Q5VXU3 224 aa27.09■■□□□ 1.93
ATXN2-219ENST00000550104 PCGF6Q9BYE7 350 aa27.04■■□□□ 1.92
ATXN2-219ENST00000550104 TRIM41Q8WV44 630 aa27.02■■□□□ 1.92
ATXN2-219ENST00000550104 CCDC180Q9P1Z9 1646 aa26.99■■□□□ 1.91
ATXN2-219ENST00000550104 ABCC9O60706 1549 aa26.87■■□□□ 1.89
ATXN2-219ENST00000550104 LOC105371045A0A1W2PR82 267 aa26.7■■□□□ 1.87
ATXN2-219ENST00000550104 TTBK1Q5TCY1 1321 aaPredicted RBP26.48■■□□□ 1.83
ATXN2-219ENST00000550104 SCRIBQ14160 1630 aa26.33■■□□□ 1.81
ATXN2-219ENST00000550104 PPARGC1BQ86YN6 1023 aaKnown RBP26.24■■□□□ 1.79
ATXN2-219ENST00000550104 PABPN1Q86U42 306 aaKnown RBP eCLIP26.23■■□□□ 1.79
ATXN2-219ENST00000550104 UBTFP17480 764 aaKnown RBP26.21■■□□□ 1.79
ATXN2-219ENST00000550104 RANGAP1P46060 587 aaPredicted RBP26.2■■□□□ 1.79
ATXN2-219ENST00000550104 APLP2Q06481 763 aa26.19■■□□□ 1.78
ATXN2-219ENST00000550104 TRIM26Q12899 539 aaPredicted RBP26.18■■□□□ 1.78
ATXN2-219ENST00000550104 HRCP23327 699 aa26.16■■□□□ 1.78
ATXN2-219ENST00000550104 DCAF1Q9Y4B6 1507 aa26.01■■□□□ 1.75
ATXN2-219ENST00000550104 ZEB1P37275 1124 aaPredicted RBP25.96■■□□□ 1.75
ATXN2-219ENST00000550104 CCER1Q8TC90 406 aaPredicted RBP25.93■■□□□ 1.74
ATXN2-219ENST00000550104 MYO15BQ96JP2 1530 aa25.92■■□□□ 1.74
ATXN2-219ENST00000550104 RSF1Q96T23 1441 aaPredicted RBP25.84■■□□□ 1.73
ATXN2-219ENST00000550104 NACADO15069 1562 aa25.66■■□□□ 1.7
ATXN2-219ENST00000550104 RB1CC1Q8TDY2 1594 aa25.57■■□□□ 1.68
ATXN2-219ENST00000550104 ATP1B4Q9UN42 357 aaPredicted RBP25.53■■□□□ 1.68
ATXN2-219ENST00000550104 CECR2Q9BXF3 1484 aa25.51■■□□□ 1.67
ATXN2-219ENST00000550104 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.43■■□□□ 1.66
ATXN2-219ENST00000550104 HNRNPUL2Q1KMD3 747 aaKnown RBP25.36■■□□□ 1.65
ATXN2-219ENST00000550104 CSRNP3Q8WYN3 585 aa25.36■■□□□ 1.65
ATXN2-219ENST00000550104 MROH2BQ7Z745 1585 aa25.24■■□□□ 1.63
ATXN2-219ENST00000550104 ITGAEP38570 1179 aa25.17■■□□□ 1.62
ATXN2-219ENST00000550104 PELP1Q8IZL8 1130 aaKnown RBP25.16■■□□□ 1.62
ATXN2-219ENST00000550104 BAZ1AQ9NRL2 1556 aaPredicted RBP25.16■■□□□ 1.62
ATXN2-219ENST00000550104 CENPBP07199 599 aaPredicted RBP25.08■■□□□ 1.61
ATXN2-219ENST00000550104 YTHDC1Q96MU7 727 aaKnown RBP24.98■■□□□ 1.59
ATXN2-219ENST00000550104 WIZO95785 1651 aa24.95■■□□□ 1.58
ATXN2-219ENST00000550104 WRNQ14191 1432 aaPredicted RBP eCLIP24.84■■□□□ 1.57
ATXN2-219ENST00000550104 CCDC88BA6NC98 1476 aa24.84■■□□□ 1.57
ATXN2-219ENST00000550104 BAZ1BQ9UIG0 1483 aaKnown RBP24.83■■□□□ 1.57
ATXN2-219ENST00000550104 DIEXFQ68CQ4 756 aaKnown RBP24.82■■□□□ 1.56
ATXN2-219ENST00000550104 CEP162Q5TB80 1403 aa24.77■■□□□ 1.56
ATXN2-219ENST00000550104 ABCC8Q09428 1581 aa24.74■■□□□ 1.55
ATXN2-219ENST00000550104 SOGA1O94964 1423 aa24.73■■□□□ 1.55
ATXN2-219ENST00000550104 EEA1Q15075 1411 aa24.72■■□□□ 1.55
ATXN2-219ENST00000550104 P3H3Q8IVL6 736 aa24.71■■□□□ 1.55
ATXN2-219ENST00000550104 FAM50AQ14320 339 aaKnown RBP24.71■■□□□ 1.55
ATXN2-219ENST00000550104 TOP2AP11388 1531 aaKnown RBP24.66■■□□□ 1.54
ATXN2-219ENST00000550104 GOLGA3Q08378 1498 aa24.65■■□□□ 1.54
ATXN2-219ENST00000550104 CLIP1P30622 1438 aa24.64■■□□□ 1.54
ATXN2-219ENST00000550104 TNIKQ9UKE5 1360 aa24.63■■□□□ 1.53
ATXN2-219ENST00000550104 MYT1Q01538 1121 aa24.61■■□□□ 1.53
ATXN2-219ENST00000550104 SMARCA4P51532 1647 aa24.58■■□□□ 1.53
ATXN2-219ENST00000550104 ZNF316A6NFI3 1004 aaPredicted RBP24.5■■□□□ 1.51
ATXN2-219ENST00000550104 CEP164Q9UPV0 1460 aa24.48■■□□□ 1.51
ATXN2-219ENST00000550104 NEUROD1Q13562 356 aa24.43■■□□□ 1.5
ATXN2-219ENST00000550104 SMARCA2P51531 1590 aa24.39■■□□□ 1.5
ATXN2-219ENST00000550104 ATAD2BQ9ULI0 1458 aa24.38■■□□□ 1.49
ATXN2-219ENST00000550104 KIF27Q86VH2 1401 aa24.33■■□□□ 1.49
ATXN2-219ENST00000550104 ARID3CA6NKF2 412 aa24.32■■□□□ 1.48
ATXN2-219ENST00000550104 RUSC2Q8N2Y8 1516 aa24.31■■□□□ 1.48
ATXN2-219ENST00000550104 FBLN2P98095 1184 aa24.26■■□□□ 1.47
ATXN2-219ENST00000550104 TRIM52Q96A61 297 aa24.23■■□□□ 1.47
ATXN2-219ENST00000550104 GTF3C3Q9Y5Q9 886 aa24.17■■□□□ 1.46
ATXN2-219ENST00000550104 ACIN1Q9UKV3 1341 aaKnown RBP24.13■■□□□ 1.45
ATXN2-219ENST00000550104 NEFLP07196 543 aa24.12■■□□□ 1.45
ATXN2-219ENST00000550104 CUX2O14529 1486 aa24.1■■□□□ 1.45
ATXN2-219ENST00000550104 VPS8Q8N3P4 1428 aa24.1■■□□□ 1.45
ATXN2-219ENST00000550104 POLR3GLQ9BT43 218 aa24.09■■□□□ 1.45
ATXN2-219ENST00000550104 RAPGEF2Q9Y4G8 1499 aa24.06■■□□□ 1.44
ATXN2-219ENST00000550104 CNGB1Q14028 1251 aaPredicted RBP24.03■■□□□ 1.44
ATXN2-219ENST00000550104 CARMIL1Q5VZK9 1371 aa24.02■■□□□ 1.44
ATXN2-219ENST00000550104 KANK4Q5T7N3 995 aaPredicted RBP23.99■■□□□ 1.43
ATXN2-219ENST00000550104 MTUS2Q5JR59 1369 aa23.96■■□□□ 1.43
ATXN2-219ENST00000550104 CADPSQ9ULU8 1353 aa23.93■■□□□ 1.42
ATXN2-219ENST00000550104 MIER1Q8N108 512 aa23.92■■□□□ 1.42
ATXN2-219ENST00000550104 CHIC2Q9UKJ5 165 aa23.91■■□□□ 1.42
ATXN2-219ENST00000550104 MYT1LQ9UL68 1186 aa23.9■■□□□ 1.42
ATXN2-219ENST00000550104 ZNF777Q9ULD5 760 aaPredicted RBP23.88■■□□□ 1.41
ATXN2-219ENST00000550104 BICRAQ9NZM4 1560 aa23.88■■□□□ 1.41
ATXN2-219ENST00000550104 SCAF1Q9H7N4 1312 aaKnown RBP23.85■■□□□ 1.41
ATXN2-219ENST00000550104 CDK11AQ9UQ88 783 aaPredicted RBP23.84■■□□□ 1.41
ATXN2-219ENST00000550104 ANP32CO43423 234 aa23.83■■□□□ 1.41
ATXN2-219ENST00000550104 CCNB3Q8WWL7 1395 aa23.83■■□□□ 1.41
ATXN2-219ENST00000550104 ZNF326Q5BKZ1 582 aaKnown RBP23.83■■□□□ 1.4
ATXN2-219ENST00000550104 NCAPD3P42695 1498 aa23.82■■□□□ 1.4
ATXN2-219ENST00000550104 TONSLQ96HA7 1378 aa23.81■■□□□ 1.4
ATXN2-219ENST00000550104 SYNJ1O43426 1573 aa23.81■■□□□ 1.4
ATXN2-219ENST00000550104 EIF4G1Q04637 1599 aaKnown RBP23.79■■□□□ 1.4
ATXN2-219ENST00000550104 DDX10Q13206 875 aaKnown RBP23.78■■□□□ 1.4
ATXN2-219ENST00000550104 FHAD1B1AJZ9 1412 aa23.74■■□□□ 1.39
ATXN2-219ENST00000550104 CHMP7Q8WUX9 453 aaPredicted RBP23.74■■□□□ 1.39
ATXN2-219ENST00000550104 TDRD9Q8NDG6 1382 aaKnown RBP23.73■■□□□ 1.39
ATXN2-219ENST00000550104 HIRIP3Q9BW71 556 aaPredicted RBP23.73■■□□□ 1.39
ATXN2-219ENST00000550104 RRP7BPQ9NSQ0 103 aa23.72■■□□□ 1.39
ATXN2-219ENST00000550104 UNC13AQ9UPW8 1703 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms