RNA–Protein interactions for RNA: ENST00000450969.5

CTNNB1-209, Transcript of catenin beta 1, humanhuman

TSL 4

Gene CTNNB1, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-209ENST00000450969 AEBP2Q6ZN18 517 aaPredicted RBP20.45■□□□□ 0.86
CTNNB1-209ENST00000450969 CHIC1Q5VXU3 224 aa20.33■□□□□ 0.85
CTNNB1-209ENST00000450969 PHF23Q9BUL5 403 aaPredicted RBP17.91■□□□□ 0.46
CTNNB1-209ENST00000450969 SENP3Q9H4L4 574 aaPredicted RBP17.29■□□□□ 0.36
CTNNB1-209ENST00000450969 PLPPR3Q6T4P5 718 aa16.65■□□□□ 0.26
CTNNB1-209ENST00000450969 FOXD1Q16676 465 aa16■□□□□ 0.15
CTNNB1-209ENST00000450969 ADRA2BP18089 450 aa15.68■□□□□ 0.1
CTNNB1-209ENST00000450969 PPP6R1Q9UPN7 881 aa15.68■□□□□ 0.1
CTNNB1-209ENST00000450969 PIAS4Q8N2W9 510 aaPredicted RBP15.17■□□□□ 0.02
CTNNB1-209ENST00000450969 KCNA4P22459 653 aa14.78□□□□□ -0.04
CTNNB1-209ENST00000450969 PPP4R3CPQ6ZMV5 832 aa14.72□□□□□ -0.05
CTNNB1-209ENST00000450969 MSH5O43196 834 aa14.61□□□□□ -0.07
CTNNB1-209ENST00000450969 NCBP3Q53F19 620 aaKnown RBP14.42□□□□□ -0.1
CTNNB1-209ENST00000450969 SCAF1Q9H7N4 1312 aaKnown RBP14.34□□□□□ -0.11
CTNNB1-209ENST00000450969 NPM3O75607 178 aaKnown RBP14.23□□□□□ -0.13
CTNNB1-209ENST00000450969 CNKSR2Q8WXI2 1034 aa14.23□□□□□ -0.13
CTNNB1-209ENST00000450969 SLC4A1APQ9BWU0 796 aaKnown RBP14.14□□□□□ -0.15
CTNNB1-209ENST00000450969 MAPK8IP2Q13387 824 aaPredicted RBP14.12□□□□□ -0.15
CTNNB1-209ENST00000450969 EHMT2Q96KQ7 1210 aa14.12□□□□□ -0.15
CTNNB1-209ENST00000450969 DMRT2Q9Y5R5 561 aa13.87□□□□□ -0.19
CTNNB1-209ENST00000450969 RNF216Q9NWF9 866 aaPredicted RBP13.86□□□□□ -0.19
CTNNB1-209ENST00000450969 CSRNP3Q8WYN3 585 aa13.83□□□□□ -0.2
CTNNB1-209ENST00000450969 DNAJC5BQ9UF47 199 aa13.81□□□□□ -0.2
CTNNB1-209ENST00000450969 HOXD11P31277 338 aaPredicted RBP13.73□□□□□ -0.21
CTNNB1-209ENST00000450969 ZBTB22O15209 634 aa13.62□□□□□ -0.23
CTNNB1-209ENST00000450969 FOXD4L1Q9NU39 408 aa13.51□□□□□ -0.25
CTNNB1-209ENST00000450969 SLC4A2P04920 1241 aa13.36□□□□□ -0.27
CTNNB1-209ENST00000450969 DCAF8L1A6NGE4 600 aa13.2□□□□□ -0.3
CTNNB1-209ENST00000450969 MYCNP04198 464 aaPredicted RBP13.14□□□□□ -0.31
CTNNB1-209ENST00000450969 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.04□□□□□ -0.322e-13■■□□□ 11.9
CTNNB1-209ENST00000450969 ATXN8OSP0DMR3 200 aa13.01□□□□□ -0.33
CTNNB1-209ENST00000450969 U3KPZ7 1027 aaPredicted RBP12.9□□□□□ -0.34
CTNNB1-209ENST00000450969 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.85□□□□□ -0.35
CTNNB1-209ENST00000450969 HNRNPUL2Q1KMD3 747 aaKnown RBP12.85□□□□□ -0.35
CTNNB1-209ENST00000450969 SAMD1Q6SPF0 538 aaPredicted RBP12.83□□□□□ -0.36
CTNNB1-209ENST00000450969 ATF5Q9Y2D1 282 aaPredicted RBP12.76□□□□□ -0.37
CTNNB1-209ENST00000450969 POTEDQ86YR6 584 aa12.68□□□□□ -0.38
CTNNB1-209ENST00000450969 APLP2Q06481 763 aa12.62□□□□□ -0.39
CTNNB1-209ENST00000450969 RNF39Q9H2S5 420 aa12.56□□□□□ -0.4
CTNNB1-209ENST00000450969 ZNF219Q9P2Y4 722 aaPredicted RBP12.51□□□□□ -0.41
CTNNB1-209ENST00000450969 FKBP8Q14318 412 aa12.46□□□□□ -0.41
CTNNB1-209ENST00000450969 C1QBPQ07021 282 aaKnown RBP12.43□□□□□ -0.42
CTNNB1-209ENST00000450969 SPINK5Q9NQ38 1064 aaPredicted RBP12.42□□□□□ -0.42
CTNNB1-209ENST00000450969 TRHP20396 242 aaPredicted RBP12.37□□□□□ -0.43
CTNNB1-209ENST00000450969 CAPN15O75808 1086 aa12.34□□□□□ -0.43
CTNNB1-209ENST00000450969 POLA2Q14181 598 aa12.26□□□□□ -0.45
CTNNB1-209ENST00000450969 MKRN4PQ13434 485 aaPredicted RBP12.23□□□□□ -0.45
CTNNB1-209ENST00000450969 FBLN2P98095 1184 aa12.18□□□□□ -0.46
CTNNB1-209ENST00000450969 ABCB7O75027 752 aa12.14□□□□□ -0.47
CTNNB1-209ENST00000450969 SPDYE4A6NLX3 237 aa12.11□□□□□ -0.47
CTNNB1-209ENST00000450969 ZBTB12Q9Y330 459 aaPredicted RBP12.09□□□□□ -0.47
CTNNB1-209ENST00000450969 DSG3P32926 999 aa12.08□□□□□ -0.48
CTNNB1-209ENST00000450969 PROM2Q8N271 834 aa12□□□□□ -0.49
CTNNB1-209ENST00000450969 AMER1Q5JTC6 1135 aaPredicted RBP11.99□□□□□ -0.49
CTNNB1-209ENST00000450969 RTN4Q9NQC3 1192 aaKnown RBP11.97□□□□□ -0.49
CTNNB1-209ENST00000450969 CACNB1Q02641 598 aaPredicted RBP11.95□□□□□ -0.5
CTNNB1-209ENST00000450969 FBXO3Q9UK99 471 aa11.92□□□□□ -0.5
CTNNB1-209ENST00000450969 OSCARQ8IYS5 282 aa11.84□□□□□ -0.51
CTNNB1-209ENST00000450969 SPDYE2BA6NHP3 402 aa11.8□□□□□ -0.52
CTNNB1-209ENST00000450969 SPDYE6P0CI01 402 aa11.8□□□□□ -0.52
CTNNB1-209ENST00000450969 SPDYE2Q495Y8 402 aa11.8□□□□□ -0.52
CTNNB1-209ENST00000450969 ZNF692Q9BU19 519 aaPredicted RBP11.79□□□□□ -0.52
CTNNB1-209ENST00000450969 VASPP50552 380 aaPredicted RBP11.76□□□□□ -0.53
CTNNB1-209ENST00000450969 SSUH2Q9Y2M2 353 aa11.76□□□□□ -0.53
CTNNB1-209ENST00000450969 PABPN1Q86U42 306 aaKnown RBP eCLIP11.66□□□□□ -0.54
CTNNB1-209ENST00000450969 IFNLR1Q8IU57 520 aaPredicted RBP11.63□□□□□ -0.55
CTNNB1-209ENST00000450969 STAG3Q9UJ98 1225 aa11.6□□□□□ -0.55
CTNNB1-209ENST00000450969 RBM42Q9BTD8 480 aaKnown RBP11.49□□□□□ -0.57
CTNNB1-209ENST00000450969 PLCD3Q8N3E9 789 aa11.45□□□□□ -0.58
CTNNB1-209ENST00000450969 KLHL34Q8N239 644 aa11.44□□□□□ -0.58
CTNNB1-209ENST00000450969 MIER1Q8N108 512 aa11.43□□□□□ -0.58
CTNNB1-209ENST00000450969 SPOCK2Q92563 424 aa11.43□□□□□ -0.58
CTNNB1-209ENST00000450969 AKT1S1Q96B36 256 aa11.43□□□□□ -0.58
CTNNB1-209ENST00000450969 SLC24A1O60721 1099 aa11.39□□□□□ -0.59
CTNNB1-209ENST00000450969 PKD2Q13563 968 aa11.38□□□□□ -0.59
CTNNB1-209ENST00000450969 SPDYE1Q8NFV5 336 aaPredicted RBP11.36□□□□□ -0.59
CTNNB1-209ENST00000450969 PLEKHG5O94827 1062 aa11.34□□□□□ -0.59
CTNNB1-209ENST00000450969 REM2Q8IYK8 340 aaPredicted RBP11.32□□□□□ -0.6
CTNNB1-209ENST00000450969 ZBTB47Q9UFB7 747 aaPredicted RBP11.32□□□□□ -0.6
CTNNB1-209ENST00000450969 CLEC11AQ9Y240 323 aa11.27□□□□□ -0.61
CTNNB1-209ENST00000450969 PRR29P0C7W0 189 aa11.23□□□□□ -0.61
CTNNB1-209ENST00000450969 ECM2O94769 699 aaPredicted RBP11.22□□□□□ -0.61
CTNNB1-209ENST00000450969 DCAF8L2P0C7V8 631 aa11.21□□□□□ -0.61
CTNNB1-209ENST00000450969 CREBZFQ9NS37 354 aa11.19□□□□□ -0.62
CTNNB1-209ENST00000450969 PITPNM1O00562 1244 aa11.18□□□□□ -0.62
CTNNB1-209ENST00000450969 CIZ1Q9ULV3 898 aaPredicted RBP11.17□□□□□ -0.62
CTNNB1-209ENST00000450969 MNX1P50219 401 aaPredicted RBP11.13□□□□□ -0.63
CTNNB1-209ENST00000450969 NUBP1P53384 320 aa11.13□□□□□ -0.63
CTNNB1-209ENST00000450969 RGL2O15211 777 aa11.12□□□□□ -0.63
CTNNB1-209ENST00000450969 TRIM41Q8WV44 630 aa11.1□□□□□ -0.63
CTNNB1-209ENST00000450969 PLCB2Q00722 1185 aa11.09□□□□□ -0.63
CTNNB1-209ENST00000450969 GSE1Q14687 1217 aa11.09□□□□□ -0.63
CTNNB1-209ENST00000450969 DCAF8Q5TAQ9 597 aa11.03□□□□□ -0.64
CTNNB1-209ENST00000450969 NPM1P06748 294 aaKnown RBP eCLIP11.02□□□□□ -0.65
CTNNB1-209ENST00000450969 FAM212AQ96EL1 285 aa11.02□□□□□ -0.65
CTNNB1-209ENST00000450969 RASEFQ8IZ41 740 aa11□□□□□ -0.65
CTNNB1-209ENST00000450969 BBXQ8WY36 941 aaPredicted RBP11□□□□□ -0.65
CTNNB1-209ENST00000450969 CHADLQ6NUI6 762 aa10.97□□□□□ -0.65
CTNNB1-209ENST00000450969 RNF25Q96BH1 459 aaPredicted RBP10.97□□□□□ -0.65
CTNNB1-209ENST00000450969 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms