RNA–Protein interactions for RNA: ENST00000507845.5

UBE2D3-221, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-221ENST00000507845 NISCHQ9Y2I1 1504 aa32.16■■■□□ 2.74
UBE2D3-221ENST00000507845 AEBP2Q6ZN18 517 aaPredicted RBP30.95■■■□□ 2.55
UBE2D3-221ENST00000507845 CHIC1Q5VXU3 224 aa29.69■■■□□ 2.34
UBE2D3-221ENST00000507845 CCDC180Q9P1Z9 1646 aa28.47■■■□□ 2.15
UBE2D3-221ENST00000507845 ABCC9O60706 1549 aa27.45■■□□□ 1.98
UBE2D3-221ENST00000507845 ZCCHC6Q5VYS8 1495 aaKnown RBP26.87■■□□□ 1.89
UBE2D3-221ENST00000507845 NACADO15069 1562 aa26.64■■□□□ 1.86
UBE2D3-221ENST00000507845 DCAF8L2P0C7V8 631 aa26.64■■□□□ 1.86
UBE2D3-221ENST00000507845 DCAF1Q9Y4B6 1507 aa26.63■■□□□ 1.85
UBE2D3-221ENST00000507845 MYO15BQ96JP2 1530 aa26.6■■□□□ 1.85
UBE2D3-221ENST00000507845 RB1CC1Q8TDY2 1594 aa26.58■■□□□ 1.85
UBE2D3-221ENST00000507845 SENP3Q9H4L4 574 aaPredicted RBP26.24■■□□□ 1.79
UBE2D3-221ENST00000507845 PHF23Q9BUL5 403 aaPredicted RBP26.12■■□□□ 1.77
UBE2D3-221ENST00000507845 UNC13AQ9UPW8 1703 aa26.08■■□□□ 1.77
UBE2D3-221ENST00000507845 SCRIBQ14160 1630 aa25.99■■□□□ 1.75
UBE2D3-221ENST00000507845 BICRAQ9NZM4 1560 aa25.8■■□□□ 1.72
UBE2D3-221ENST00000507845 PABPN1Q86U42 306 aaKnown RBP eCLIP25.68■■□□□ 1.7
UBE2D3-221ENST00000507845 SHROOM4Q9ULL8 1493 aa25.59■■□□□ 1.69
UBE2D3-221ENST00000507845 EIF4G1Q04637 1599 aaKnown RBP25.06■■□□□ 1.6
UBE2D3-221ENST00000507845 CECR2Q9BXF3 1484 aa25.01■■□□□ 1.59
UBE2D3-221ENST00000507845 SMARCA4P51532 1647 aa24.9■■□□□ 1.58
UBE2D3-221ENST00000507845 BAZ1AQ9NRL2 1556 aaPredicted RBP24.89■■□□□ 1.58
UBE2D3-221ENST00000507845 CC2D2AQ9P2K1 1620 aa24.88■■□□□ 1.57
UBE2D3-221ENST00000507845 DNAJC5BQ9UF47 199 aa24.85■■□□□ 1.57
UBE2D3-221ENST00000507845 MROH2BQ7Z745 1585 aa24.8■■□□□ 1.56
UBE2D3-221ENST00000507845 PEG3Q9GZU2 1588 aa24.64■■□□□ 1.54
UBE2D3-221ENST00000507845 ATAD2BQ9ULI0 1458 aa24.64■■□□□ 1.53
UBE2D3-221ENST00000507845 SMARCA2P51531 1590 aa24.63■■□□□ 1.53
UBE2D3-221ENST00000507845 RSF1Q96T23 1441 aaPredicted RBP24.62■■□□□ 1.53
UBE2D3-221ENST00000507845 WIZO95785 1651 aa24.57■■□□□ 1.52
UBE2D3-221ENST00000507845 NCAPD3P42695 1498 aa24.56■■□□□ 1.52
UBE2D3-221ENST00000507845 HMGXB3Q12766 1538 aa24.5■■□□□ 1.51
UBE2D3-221ENST00000507845 FOXD1Q16676 465 aa24.48■■□□□ 1.51
UBE2D3-221ENST00000507845 BAZ1BQ9UIG0 1483 aaKnown RBP24.45■■□□□ 1.5
UBE2D3-221ENST00000507845 TOP2AP11388 1531 aaKnown RBP24.31■■□□□ 1.48
UBE2D3-221ENST00000507845 SUPT5HO00267 1087 aaKnown RBP24.23■■□□□ 1.47
UBE2D3-221ENST00000507845 CCDC88BA6NC98 1476 aa24■■□□□ 1.43
UBE2D3-221ENST00000507845 PLPPR3Q6T4P5 718 aa23.88■■□□□ 1.41
UBE2D3-221ENST00000507845 NESP48681 1621 aa23.88■■□□□ 1.41
UBE2D3-221ENST00000507845 LAMC3Q9Y6N6 1575 aa23.87■■□□□ 1.41
UBE2D3-221ENST00000507845 CADPSQ9ULU8 1353 aa23.85■■□□□ 1.41
UBE2D3-221ENST00000507845 CFTRP13569 1480 aa23.81■■□□□ 1.4
UBE2D3-221ENST00000507845 PRDM2Q13029 1718 aa23.76■■□□□ 1.39
UBE2D3-221ENST00000507845 KIF21AQ7Z4S6 1674 aa23.66■■□□□ 1.38
UBE2D3-221ENST00000507845 PDS5BQ9NTI5 1447 aa23.66■■□□□ 1.38
UBE2D3-221ENST00000507845 ERCC6Q03468 1493 aa23.61■■□□□ 1.37
UBE2D3-221ENST00000507845 FANCD2Q9BXW9 1451 aa23.59■■□□□ 1.37
UBE2D3-221ENST00000507845 CEP164Q9UPV0 1460 aa23.53■■□□□ 1.36
UBE2D3-221ENST00000507845 THOC2Q8NI27 1593 aaKnown RBP23.47■■□□□ 1.35
UBE2D3-221ENST00000507845 MRC2Q9UBG0 1479 aa23.43■■□□□ 1.34
UBE2D3-221ENST00000507845 WDR62O43379 1518 aa23.35■■□□□ 1.33
UBE2D3-221ENST00000507845 URB2Q14146 1524 aaKnown RBP23.35■■□□□ 1.33
UBE2D3-221ENST00000507845 DNMBPQ6XZF7 1577 aa23.29■■□□□ 1.32
UBE2D3-221ENST00000507845 TOPBP1Q92547 1522 aa23.28■■□□□ 1.32
UBE2D3-221ENST00000507845 ABCC8Q09428 1581 aa23.27■■□□□ 1.32
UBE2D3-221ENST00000507845 CUX2O14529 1486 aa23.24■■□□□ 1.31
UBE2D3-221ENST00000507845 CUX1P39880 1505 aa23.24■■□□□ 1.31
UBE2D3-221ENST00000507845 PPP6R1Q9UPN7 881 aa23.23■■□□□ 1.31
UBE2D3-221ENST00000507845 WRNQ14191 1432 aaPredicted RBP eCLIP23.19■■□□□ 1.3
UBE2D3-221ENST00000507845 ADRA2BP18089 450 aa23.19■■□□□ 1.3
UBE2D3-221ENST00000507845 SYNJ1O43426 1573 aa23.17■■□□□ 1.3
UBE2D3-221ENST00000507845 BIVM-ERCC5R4GMW8 1640 aa23.16■■□□□ 1.3
UBE2D3-221ENST00000507845 TOP2BQ02880 1626 aa23.15■■□□□ 1.3
UBE2D3-221ENST00000507845 POLA1P09884 1462 aaPredicted RBP23.1■■□□□ 1.29
UBE2D3-221ENST00000507845 FGD5Q6ZNL6 1462 aa23.09■■□□□ 1.29
UBE2D3-221ENST00000507845 TARBP1Q13395 1621 aaKnown RBP23.02■■□□□ 1.28
UBE2D3-221ENST00000507845 IFT140Q96RY7 1462 aa23.02■■□□□ 1.28
UBE2D3-221ENST00000507845 RAD54L2Q9Y4B4 1467 aa22.98■■□□□ 1.27
UBE2D3-221ENST00000507845 SOGA1O94964 1423 aa22.98■■□□□ 1.27
UBE2D3-221ENST00000507845 PIAS4Q8N2W9 510 aaPredicted RBP22.97■■□□□ 1.27
UBE2D3-221ENST00000507845 WDR97A6NE52 1622 aa22.95■■□□□ 1.26
UBE2D3-221ENST00000507845 ABCA10Q8WWZ4 1543 aa22.89■■□□□ 1.26
UBE2D3-221ENST00000507845 ZNF608Q9ULD9 1512 aaPredicted RBP22.89■■□□□ 1.26
UBE2D3-221ENST00000507845 TRIM41Q8WV44 630 aa22.86■■□□□ 1.25
UBE2D3-221ENST00000507845 EIF4G3O43432 1585 aaKnown RBP22.85■■□□□ 1.25
UBE2D3-221ENST00000507845 TDRD9Q8NDG6 1382 aaKnown RBP22.8■■□□□ 1.24
UBE2D3-221ENST00000507845 ABCA5Q8WWZ7 1642 aa22.8■■□□□ 1.24
UBE2D3-221ENST00000507845 AQRO60306 1485 aaKnown RBP eCLIP22.79■■□□□ 1.242e-7■■■□□ 15.8
UBE2D3-221ENST00000507845 PBRM1Q86U86 1689 aa22.74■■□□□ 1.23
UBE2D3-221ENST00000507845 GAPVD1Q14C86 1478 aa22.73■■□□□ 1.23
UBE2D3-221ENST00000507845 GRIN2BQ13224 1484 aa22.68■■□□□ 1.22
UBE2D3-221ENST00000507845 KIF27Q86VH2 1401 aa22.67■■□□□ 1.22
UBE2D3-221ENST00000507845 MSH5O43196 834 aa22.67■■□□□ 1.22
UBE2D3-221ENST00000507845 ERICH3Q5RHP9 1530 aa22.62■■□□□ 1.21
UBE2D3-221ENST00000507845 RUSC2Q8N2Y8 1516 aa22.62■■□□□ 1.21
UBE2D3-221ENST00000507845 SNAPC4Q5SXM2 1469 aa22.61■■□□□ 1.21
UBE2D3-221ENST00000507845 MAGI1Q96QZ7 1491 aaPredicted RBP22.59■■□□□ 1.21
UBE2D3-221ENST00000507845 ADAMTS12P58397 1594 aa22.55■■□□□ 1.2
UBE2D3-221ENST00000507845 IGF1RP08069 1367 aa22.54■■□□□ 1.2
UBE2D3-221ENST00000507845 CHD1O14646 1710 aa22.53■■□□□ 1.2
UBE2D3-221ENST00000507845 CUL7Q14999 1698 aa22.52■■□□□ 1.2
UBE2D3-221ENST00000507845 SYNJ2O15056 1496 aa22.49■■□□□ 1.19
UBE2D3-221ENST00000507845 FHAD1B1AJZ9 1412 aa22.48■■□□□ 1.19
UBE2D3-221ENST00000507845 EEA1Q15075 1411 aa22.48■■□□□ 1.19
UBE2D3-221ENST00000507845 CARMIL1Q5VZK9 1371 aa22.41■■□□□ 1.18
UBE2D3-221ENST00000507845 FBLN2P98095 1184 aa22.41■■□□□ 1.18
UBE2D3-221ENST00000507845 CHMP7Q8WUX9 453 aaPredicted RBP22.41■■□□□ 1.18
UBE2D3-221ENST00000507845 GRIN2AQ12879 1464 aa22.4■■□□□ 1.18
UBE2D3-221ENST00000507845 FAM9AQ8IZU1 332 aaPredicted RBP22.39■■□□□ 1.17
UBE2D3-221ENST00000507845 CSRNP3Q8WYN3 585 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms