Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 NAP1L4-217ENST00000529361 555 ntTSL 56.26□□□□□ -1.415e-7■■■□□ 16.2
DDX52Q9Y2R4 NAP1L4-202ENST00000399614 594 ntTSL 44.72□□□□□ -1.655e-7■■■□□ 16.2
DDX52Q9Y2R4 NAP1L4-204ENST00000448187 888 ntTSL 54.72□□□□□ -1.655e-7■■■□□ 16.2
DDX52Q9Y2R4 DYRK1A-205ENST00000426672 519 ntTSL 53.83□□□□□ -1.85e-7■■■□□ 16.2
DDX52Q9Y2R4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.367e-9■■■□□ 16.1
DDX52Q9Y2R4 OAZ1-205ENST00000589361 679 ntTSL 1 (best)19■□□□□ 0.636e-24■■■□□ 16.1
DDX52Q9Y2R4 RPH3AL-205ENST00000570893 594 ntTSL 319.43■□□□□ 0.75e-6■■■□□ 16
DDX52Q9Y2R4 RPH3AL-206ENST00000570954 568 ntTSL 414.5□□□□□ -0.095e-6■■■□□ 16
DDX52Q9Y2R4 ZNF276-209ENST00000568295 2206 ntTSL 229.74■■■□□ 2.354e-6■■■□□ 16
DDX52Q9Y2R4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.064e-6■■■□□ 16
DDX52Q9Y2R4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.363e-7■■■□□ 15.9
DDX52Q9Y2R4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.343e-7■■■□□ 15.9
DDX52Q9Y2R4 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.163e-7■■■□□ 15.9
DDX52Q9Y2R4 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.33e-7■■■□□ 15.9
DDX52Q9Y2R4 ASXL1-204ENST00000470145 1073 ntTSL 511.84□□□□□ -0.513e-7■■■□□ 15.9
DDX52Q9Y2R4 H2AFZ-202ENST00000511203 1880 ntTSL 235.21■■■■□ 3.238e-9■■■□□ 15.8
DDX52Q9Y2R4 RAB40C-211ENST00000568586 648 ntTSL 234.99■■■■□ 3.194e-6■■■□□ 15.8
DDX52Q9Y2R4 H2AFZ-203ENST00000511319 1254 ntTSL 1 (best)34.46■■■■□ 3.118e-9■■■□□ 15.8
DDX52Q9Y2R4 NADK-205ENST00000460602 974 ntTSL 230.75■■■□□ 2.514e-6■■■□□ 15.8
DDX52Q9Y2R4 NADK-212ENST00000492768 859 ntTSL 330.72■■■□□ 2.514e-6■■■□□ 15.8
DDX52Q9Y2R4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.244e-6■■■□□ 15.8
DDX52Q9Y2R4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.164e-6■■■□□ 15.8
DDX52Q9Y2R4 RAB40C-209ENST00000565511 783 ntTSL 328.3■■■□□ 2.124e-6■■■□□ 15.8
DDX52Q9Y2R4 RAB40C-212ENST00000569575 692 ntTSL 227.78■■■□□ 2.044e-6■■■□□ 15.8
DDX52Q9Y2R4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.938e-9■■■□□ 15.8
DDX52Q9Y2R4 RAB40C-207ENST00000563109 710 ntTSL 322.29■■□□□ 1.164e-6■■■□□ 15.8
DDX52Q9Y2R4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.844e-6■■■□□ 15.8
DDX52Q9Y2R4 RAB40C-210ENST00000566290 753 ntTSL 319.6■□□□□ 0.734e-6■■■□□ 15.8
DDX52Q9Y2R4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.728e-9■■■□□ 15.8
DDX52Q9Y2R4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.714e-6■■■□□ 15.8
DDX52Q9Y2R4 RAB40C-202ENST00000509637 565 ntTSL 318.99■□□□□ 0.634e-6■■■□□ 15.8
DDX52Q9Y2R4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.64■□□□□ 0.578e-9■■■□□ 15.8
DDX52Q9Y2R4 H2AFZ-204ENST00000511348 1843 ntTSL 1 (best)15.76■□□□□ 0.118e-9■■■□□ 15.8
DDX52Q9Y2R4 H2AFZ-205ENST00000527366 435 ntTSL 314.48□□□□□ -0.098e-9■■■□□ 15.8
DDX52Q9Y2R4 H2AFZ-206ENST00000529158 726 ntTSL 311.86□□□□□ -0.518e-9■■■□□ 15.8
DDX52Q9Y2R4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.64e-6■■■□□ 15.8
DDX52Q9Y2R4 RER1-201ENST00000306256 695 ntTSL 524.36■■□□□ 1.495e-6■■■□□ 15.8
DDX52Q9Y2R4 RER1-204ENST00000378518 522 ntTSL 3 BASIC23.74■■□□□ 1.395e-6■■■□□ 15.8
DDX52Q9Y2R4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.26■□□□□ 0.835e-6■■■□□ 15.8
DDX52Q9Y2R4 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.39■□□□□ 0.385e-6■■■□□ 15.8
DDX52Q9Y2R4 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.265e-6■■■□□ 15.8
DDX52Q9Y2R4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.92■□□□□ 0.941e-6■■■□□ 15.8
DDX52Q9Y2R4 RNF2-204ENST00000498201 631 ntTSL 219.98■□□□□ 0.791e-6■■■□□ 15.8
DDX52Q9Y2R4 RNF2-202ENST00000367510 3606 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.571e-6■■■□□ 15.8
DDX52Q9Y2R4 YWHAE-209ENST00000572108 258 ntTSL 311.44□□□□□ -0.588e-7■■■□□ 15.8
DDX52Q9Y2R4 CAPN15-205ENST00000567216 3174 ntTSL 1 (best)22.41■■□□□ 1.182e-6■■■□□ 15.7
DDX52Q9Y2R4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.346e-13■■■□□ 15.7
DDX52Q9Y2R4 KCTD15-204ENST00000587658 632 ntTSL 328.62■■■□□ 2.176e-13■■■□□ 15.7
DDX52Q9Y2R4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.846e-13■■■□□ 15.7
DDX52Q9Y2R4 KCTD15-205ENST00000588637 571 ntTSL 521.03■□□□□ 0.966e-13■■■□□ 15.7
DDX52Q9Y2R4 KCTD15-209ENST00000590771 577 ntTSL 319.4■□□□□ 0.76e-13■■■□□ 15.7
DDX52Q9Y2R4 KCTD15-203ENST00000587559 622 ntTSL 418.62■□□□□ 0.576e-13■■■□□ 15.7
DDX52Q9Y2R4 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.25■□□□□ 0.196e-13■■■□□ 15.7
DDX52Q9Y2R4 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.24□□□□□ -1.412e-8■■■□□ 15.6
DDX52Q9Y2R4 LRRC41-205ENST00000498402 2068 ntTSL 220.23■□□□□ 0.834e-8■■■□□ 15.6
DDX52Q9Y2R4 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.284e-8■■■□□ 15.6
DDX52Q9Y2R4 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC13.81□□□□□ -0.24e-8■■■□□ 15.6
DDX52Q9Y2R4 LRRC41-207ENST00000617190 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.424e-8■■■□□ 15.6
DDX52Q9Y2R4 GET4-203ENST00000412734 873 ntTSL 217.68■□□□□ 0.423e-6■■■□□ 15.5
DDX52Q9Y2R4 SOGA1-202ENST00000279034 3703 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.473e-6■■■□□ 15.4
DDX52Q9Y2R4 RANBP1-204ENST00000416427 645 ntTSL 529.77■■■□□ 2.364e-7■■■□□ 15.4
DDX52Q9Y2R4 RANBP1-206ENST00000421656 333 ntTSL 319.15■□□□□ 0.664e-7■■■□□ 15.4
DDX52Q9Y2R4 RANBP1-214ENST00000488484 699 ntTSL 218.02■□□□□ 0.484e-7■■■□□ 15.4
DDX52Q9Y2R4 RANBP1-209ENST00000432879 744 ntTSL 317.04■□□□□ 0.324e-7■■■□□ 15.4
DDX52Q9Y2R4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.335e-6■■■□□ 15.4
DDX52Q9Y2R4 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.035e-6■■■□□ 15.4
DDX52Q9Y2R4 CTBP2-206ENST00000460976 603 ntTSL 531.34■■■□□ 2.612e-6■■■□□ 15.3
DDX52Q9Y2R4 CTBP2-207ENST00000467395 410 ntTSL 329.33■■■□□ 2.292e-6■■■□□ 15.3
DDX52Q9Y2R4 RBM38-201ENST00000342690 852 ntTSL 326.05■■□□□ 1.764e-6■■■□□ 15.3
DDX52Q9Y2R4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC26.04■■□□□ 1.764e-6■■■□□ 15.3
DDX52Q9Y2R4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.654e-6■■■□□ 15.3
DDX52Q9Y2R4 RBM38-202ENST00000344785 2193 ntTSL 521.51■■□□□ 1.034e-6■■■□□ 15.3
DDX52Q9Y2R4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.51■□□□□ 0.394e-6■■■□□ 15.3
DDX52Q9Y2R4 EIF4A1-216ENST00000580888 710 ntTSL 220.81■□□□□ 0.925e-7■■■□□ 15.3
DDX52Q9Y2R4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.43■□□□□ 0.865e-7■■■□□ 15.3
DDX52Q9Y2R4 EIF4A1-208ENST00000578476 573 ntTSL 219.73■□□□□ 0.755e-7■■■□□ 15.3
DDX52Q9Y2R4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.555e-7■■■□□ 15.3
DDX52Q9Y2R4 EIF4A1-214ENST00000580461 909 ntTSL 215.16■□□□□ 0.025e-7■■■□□ 15.3
DDX52Q9Y2R4 EIF4A1-213ENST00000579139 568 ntTSL 414.15□□□□□ -0.145e-7■■■□□ 15.3
DDX52Q9Y2R4 EIF4A1-236ENST00000584901 1021 ntTSL 213.58□□□□□ -0.245e-7■■■□□ 15.3
DDX52Q9Y2R4 EIF4A1-218ENST00000581544 1444 ntTSL 213.47□□□□□ -0.255e-7■■■□□ 15.3
DDX52Q9Y2R4 EIF4A1-226ENST00000582848 591 ntTSL 313.44□□□□□ -0.265e-7■■■□□ 15.3
DDX52Q9Y2R4 EIF4A1-223ENST00000582169 552 ntTSL 412.83□□□□□ -0.365e-7■■■□□ 15.3
DDX52Q9Y2R4 EIF4A1-229ENST00000583802 563 ntTSL 412.83□□□□□ -0.365e-7■■■□□ 15.3
DDX52Q9Y2R4 AC016876.2-201ENST00000581621 4554 ntTSL 2 BASIC12.81□□□□□ -0.365e-7■■■□□ 15.3
DDX52Q9Y2R4 EIF4A1-225ENST00000582746 1645 ntTSL 5 BASIC12.7□□□□□ -0.385e-7■■■□□ 15.3
DDX52Q9Y2R4 SENP3-EIF4A1-201ENST00000614237 3519 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.415e-7■■■□□ 15.3
DDX52Q9Y2R4 EIF4A1-215ENST00000580886 562 ntTSL 211.91□□□□□ -0.55e-7■■■□□ 15.3
DDX52Q9Y2R4 EIF4A1-231ENST00000584054 716 ntTSL 211.91□□□□□ -0.55e-7■■■□□ 15.3
DDX52Q9Y2R4 EIF4A1-232ENST00000584712 782 ntTSL 211.4□□□□□ -0.585e-7■■■□□ 15.3
DDX52Q9Y2R4 EIF4A1-233ENST00000584784 818 ntTSL 511.38□□□□□ -0.595e-7■■■□□ 15.3
DDX52Q9Y2R4 EIF4A1-209ENST00000578495 916 ntTSL 510.97□□□□□ -0.655e-7■■■□□ 15.3
DDX52Q9Y2R4 EIF4A1-212ENST00000579085 569 ntTSL 410.44□□□□□ -0.745e-7■■■□□ 15.3
DDX52Q9Y2R4 EIF4A1-237ENST00000585024 577 ntTSL 410.14□□□□□ -0.795e-7■■■□□ 15.3
DDX52Q9Y2R4 EIF4A1-202ENST00000396527 1169 ntTSL 28.98□□□□□ -0.975e-7■■■□□ 15.3
DDX52Q9Y2R4 EIF4A1-230ENST00000583899 665 ntTSL 37.49□□□□□ -1.215e-7■■■□□ 15.3
DDX52Q9Y2R4 EIF4A1-211ENST00000578754 547 ntTSL 46.5□□□□□ -1.375e-7■■■□□ 15.3
DDX52Q9Y2R4 EIF4A1-224ENST00000582213 560 ntTSL 44.47□□□□□ -1.695e-7■■■□□ 15.3
DDX52Q9Y2R4 FAM234B-202ENST00000416494 2623 ntTSL 213.38□□□□□ -0.273e-22■■■□□ 15.3
DDX52Q9Y2R4 FAM234B-201ENST00000197268 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.573e-22■■■□□ 15.3
Retrieved 100 of 4,483 protein–RNA pairs in 87.1 ms