RNA–Protein interactions for RNA: ENST00000579085.5

EIF4A1-212, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 4

Gene EIF4A1, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-212ENST00000579085 NISCHQ9Y2I1 1504 aa22.59■■□□□ 1.21
EIF4A1-212ENST00000579085 ABCC9O60706 1549 aa20.5■□□□□ 0.87
EIF4A1-212ENST00000579085 CCDC180Q9P1Z9 1646 aa20.45■□□□□ 0.87
EIF4A1-212ENST00000579085 RB1CC1Q8TDY2 1594 aa19.53■□□□□ 0.72
EIF4A1-212ENST00000579085 DNAJC5BQ9UF47 199 aa19.43■□□□□ 0.7
EIF4A1-212ENST00000579085 NACADO15069 1562 aa19.36■□□□□ 0.69
EIF4A1-212ENST00000579085 UNC13AQ9UPW8 1703 aa19.12■□□□□ 0.65
EIF4A1-212ENST00000579085 MYO15BQ96JP2 1530 aa19.1■□□□□ 0.65
EIF4A1-212ENST00000579085 PABPN1Q86U42 306 aaKnown RBP eCLIP18.99■□□□□ 0.63
EIF4A1-212ENST00000579085 DCAF8L2P0C7V8 631 aa18.97■□□□□ 0.63
EIF4A1-212ENST00000579085 BICRAQ9NZM4 1560 aa18.96■□□□□ 0.63
EIF4A1-212ENST00000579085 SHROOM4Q9ULL8 1493 aa18.77■□□□□ 0.6
EIF4A1-212ENST00000579085 DCAF1Q9Y4B6 1507 aa18.74■□□□□ 0.59
EIF4A1-212ENST00000579085 ZCCHC6Q5VYS8 1495 aaKnown RBP18.68■□□□□ 0.58
EIF4A1-212ENST00000579085 CC2D2AQ9P2K1 1620 aa18.58■□□□□ 0.56
EIF4A1-212ENST00000579085 CECR2Q9BXF3 1484 aa18.53■□□□□ 0.56
EIF4A1-212ENST00000579085 EIF4G1Q04637 1599 aaKnown RBP18.51■□□□□ 0.55
EIF4A1-212ENST00000579085 SCRIBQ14160 1630 aa18.48■□□□□ 0.55
EIF4A1-212ENST00000579085 DNAJC5Q9H3Z4 198 aa18.07■□□□□ 0.48
EIF4A1-212ENST00000579085 CUX2O14529 1486 aa17.87■□□□□ 0.45
EIF4A1-212ENST00000579085 NCAPD3P42695 1498 aa17.86■□□□□ 0.45
EIF4A1-212ENST00000579085 ATAD2BQ9ULI0 1458 aa17.74■□□□□ 0.43
EIF4A1-212ENST00000579085 ERCC6Q03468 1493 aa17.73■□□□□ 0.43
EIF4A1-212ENST00000579085 HMGXB3Q12766 1538 aa17.72■□□□□ 0.43
EIF4A1-212ENST00000579085 SMARCA2P51531 1590 aa17.7■□□□□ 0.42
EIF4A1-212ENST00000579085 SMARCA4P51532 1647 aa17.68■□□□□ 0.42
EIF4A1-212ENST00000579085 PEG3Q9GZU2 1588 aa17.58■□□□□ 0.41
EIF4A1-212ENST00000579085 BAZ1AQ9NRL2 1556 aaPredicted RBP17.57■□□□□ 0.4
EIF4A1-212ENST00000579085 NESP48681 1621 aa17.55■□□□□ 0.4
EIF4A1-212ENST00000579085 BAZ1BQ9UIG0 1483 aaKnown RBP17.53■□□□□ 0.4
EIF4A1-212ENST00000579085 THOC2Q8NI27 1593 aaKnown RBP17.51■□□□□ 0.39
EIF4A1-212ENST00000579085 LAMC3Q9Y6N6 1575 aa17.51■□□□□ 0.39
EIF4A1-212ENST00000579085 KIF21AQ7Z4S6 1674 aa17.4■□□□□ 0.38
EIF4A1-212ENST00000579085 PDS5BQ9NTI5 1447 aa17.37■□□□□ 0.37
EIF4A1-212ENST00000579085 MROH2BQ7Z745 1585 aa17.36■□□□□ 0.37
EIF4A1-212ENST00000579085 CADPSQ9ULU8 1353 aa17.27■□□□□ 0.35
EIF4A1-212ENST00000579085 WDR62O43379 1518 aa17.22■□□□□ 0.35
EIF4A1-212ENST00000579085 MRC2Q9UBG0 1479 aa17.22■□□□□ 0.35
EIF4A1-212ENST00000579085 WIZO95785 1651 aa17.15■□□□□ 0.34
EIF4A1-212ENST00000579085 CEP164Q9UPV0 1460 aa17.1■□□□□ 0.33
EIF4A1-212ENST00000579085 CFTRP13569 1480 aa17.05■□□□□ 0.32
EIF4A1-212ENST00000579085 FANCD2Q9BXW9 1451 aa17.05■□□□□ 0.32
EIF4A1-212ENST00000579085 TRIM41Q8WV44 630 aa17.05■□□□□ 0.32
EIF4A1-212ENST00000579085 OSCARQ8IYS5 282 aa16.95■□□□□ 0.3
EIF4A1-212ENST00000579085 TOP2AP11388 1531 aaKnown RBP16.95■□□□□ 0.3
EIF4A1-212ENST00000579085 PRDM2Q13029 1718 aa16.94■□□□□ 0.3
EIF4A1-212ENST00000579085 URB2Q14146 1524 aaKnown RBP16.93■□□□□ 0.3
EIF4A1-212ENST00000579085 RSF1Q96T23 1441 aaPredicted RBP16.93■□□□□ 0.3
EIF4A1-212ENST00000579085 IFT140Q96RY7 1462 aa16.79■□□□□ 0.28
EIF4A1-212ENST00000579085 RIMBP3CA6NJZ7 1639 aa16.78■□□□□ 0.28
EIF4A1-212ENST00000579085 RIMBP3BA6NNM3 1639 aa16.78■□□□□ 0.28
EIF4A1-212ENST00000579085 RIMBP3Q9UFD9 1639 aa16.78■□□□□ 0.28
EIF4A1-212ENST00000579085 ABCC8Q09428 1581 aa16.73■□□□□ 0.27
EIF4A1-212ENST00000579085 ZNF608Q9ULD9 1512 aaPredicted RBP16.73■□□□□ 0.27
EIF4A1-212ENST00000579085 CCDC88BA6NC98 1476 aa16.73■□□□□ 0.27
EIF4A1-212ENST00000579085 TOPBP1Q92547 1522 aa16.72■□□□□ 0.27
EIF4A1-212ENST00000579085 ARHGEF11O15085 1522 aa16.7■□□□□ 0.26
EIF4A1-212ENST00000579085 EIF4G3O43432 1585 aaKnown RBP16.68■□□□□ 0.26
EIF4A1-212ENST00000579085 DNMBPQ6XZF7 1577 aa16.66■□□□□ 0.26
EIF4A1-212ENST00000579085 TARBP1Q13395 1621 aaKnown RBP16.63■□□□□ 0.25
EIF4A1-212ENST00000579085 CHD1O14646 1710 aa16.6■□□□□ 0.25
EIF4A1-212ENST00000579085 AQRO60306 1485 aaKnown RBP eCLIP16.54■□□□□ 0.244e-7■■■□□ 17.5
EIF4A1-212ENST00000579085 POLA1P09884 1462 aaPredicted RBP16.53■□□□□ 0.24
EIF4A1-212ENST00000579085 WDR97A6NE52 1622 aa16.52■□□□□ 0.23
EIF4A1-212ENST00000579085 CYB5RLQ6IPT4 315 aa16.51■□□□□ 0.23
EIF4A1-212ENST00000579085 ARAP1Q96P48 1450 aa16.5■□□□□ 0.23
EIF4A1-212ENST00000579085 CLASP1Q7Z460 1538 aa16.42■□□□□ 0.22
EIF4A1-212ENST00000579085 SOGA1O94964 1423 aa16.42■□□□□ 0.22
EIF4A1-212ENST00000579085 RAD54L2Q9Y4B4 1467 aa16.42■□□□□ 0.22
EIF4A1-212ENST00000579085 FBLN2P98095 1184 aa16.4■□□□□ 0.22
EIF4A1-212ENST00000579085 MAGI1Q96QZ7 1491 aaPredicted RBP16.39■□□□□ 0.21
EIF4A1-212ENST00000579085 TDRD9Q8NDG6 1382 aaKnown RBP16.38■□□□□ 0.21
EIF4A1-212ENST00000579085 SYNJ1O43426 1573 aa16.38■□□□□ 0.21
EIF4A1-212ENST00000579085 SNAPC4Q5SXM2 1469 aa16.37■□□□□ 0.21
EIF4A1-212ENST00000579085 FGD5Q6ZNL6 1462 aa16.37■□□□□ 0.21
EIF4A1-212ENST00000579085 TRHP20396 242 aaPredicted RBP16.36■□□□□ 0.21
EIF4A1-212ENST00000579085 GRIN2BQ13224 1484 aa16.34■□□□□ 0.21
EIF4A1-212ENST00000579085 CUX1P39880 1505 aa16.34■□□□□ 0.21
EIF4A1-212ENST00000579085 SYNJ2O15056 1496 aa16.32■□□□□ 0.2
EIF4A1-212ENST00000579085 CHMP7Q8WUX9 453 aaPredicted RBP16.3■□□□□ 0.2
EIF4A1-212ENST00000579085 PBRM1Q86U86 1689 aa16.29■□□□□ 0.2
EIF4A1-212ENST00000579085 GAPVD1Q14C86 1478 aa16.24■□□□□ 0.19
EIF4A1-212ENST00000579085 ABCA5Q8WWZ7 1642 aa16.23■□□□□ 0.19
EIF4A1-212ENST00000579085 ABCA10Q8WWZ4 1543 aa16.22■□□□□ 0.19
EIF4A1-212ENST00000579085 GRIN2AQ12879 1464 aa16.13■□□□□ 0.17
EIF4A1-212ENST00000579085 NUP160Q12769 1436 aa16.11■□□□□ 0.17
EIF4A1-212ENST00000579085 ADAMTS12P58397 1594 aa16.1■□□□□ 0.17
EIF4A1-212ENST00000579085 SHROOM2Q13796 1616 aa16.1■□□□□ 0.17
EIF4A1-212ENST00000579085 WRNQ14191 1432 aaPredicted RBP eCLIP16.08■□□□□ 0.163e-6■■■■□ 21.9
EIF4A1-212ENST00000579085 CEP170Q5SW79 1584 aa16.08■□□□□ 0.16
EIF4A1-212ENST00000579085 ERCC6L2Q5T890 1561 aa16.08■□□□□ 0.16
EIF4A1-212ENST00000579085 BIVM-ERCC5R4GMW8 1640 aa16.08■□□□□ 0.16
EIF4A1-212ENST00000579085 AEBP2Q6ZN18 517 aaPredicted RBP16.07■□□□□ 0.16
EIF4A1-212ENST00000579085 TOP2BQ02880 1626 aa16.05■□□□□ 0.16
EIF4A1-212ENST00000579085 ERICH3Q5RHP9 1530 aa16.04■□□□□ 0.16
EIF4A1-212ENST00000579085 FHAD1B1AJZ9 1412 aa16.03■□□□□ 0.16
EIF4A1-212ENST00000579085 KIF13AQ9H1H9 1805 aa16.01■□□□□ 0.15
EIF4A1-212ENST00000579085 PRG4Q92954 1404 aaPredicted RBP15.91■□□□□ 0.14
EIF4A1-212ENST00000579085 RUSC2Q8N2Y8 1516 aa15.89■□□□□ 0.13
EIF4A1-212ENST00000579085 JPH4Q96JJ6 628 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms