RNA–Protein interactions for RNA: ENST00000584712.5

EIF4A1-232, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-232ENST00000584712 NISCHQ9Y2I1 1504 aa22.38■■□□□ 1.17
EIF4A1-232ENST00000584712 CCDC180Q9P1Z9 1646 aa19.63■□□□□ 0.73
EIF4A1-232ENST00000584712 ZCCHC6Q5VYS8 1495 aaKnown RBP18.75■□□□□ 0.59
EIF4A1-232ENST00000584712 ABCC9O60706 1549 aa18.63■□□□□ 0.57
EIF4A1-232ENST00000584712 DCAF1Q9Y4B6 1507 aa18.62■□□□□ 0.57
EIF4A1-232ENST00000584712 MYO15BQ96JP2 1530 aa18.54■□□□□ 0.56
EIF4A1-232ENST00000584712 DCAF8L2P0C7V8 631 aa18.39■□□□□ 0.53
EIF4A1-232ENST00000584712 NACADO15069 1562 aa18.38■□□□□ 0.53
EIF4A1-232ENST00000584712 RB1CC1Q8TDY2 1594 aa18.22■□□□□ 0.51
EIF4A1-232ENST00000584712 SHROOM4Q9ULL8 1493 aa17.86■□□□□ 0.45
EIF4A1-232ENST00000584712 SCRIBQ14160 1630 aa17.86■□□□□ 0.45
EIF4A1-232ENST00000584712 UNC13AQ9UPW8 1703 aa17.71■□□□□ 0.43
EIF4A1-232ENST00000584712 BICRAQ9NZM4 1560 aa17.66■□□□□ 0.42
EIF4A1-232ENST00000584712 PABPN1Q86U42 306 aaKnown RBP eCLIP17.53■□□□□ 0.4
EIF4A1-232ENST00000584712 CECR2Q9BXF3 1484 aa17.33■□□□□ 0.37
EIF4A1-232ENST00000584712 BAZ1AQ9NRL2 1556 aaPredicted RBP17.3■□□□□ 0.36
EIF4A1-232ENST00000584712 RSF1Q96T23 1441 aaPredicted RBP17.27■□□□□ 0.35
EIF4A1-232ENST00000584712 MROH2BQ7Z745 1585 aa17.22■□□□□ 0.35
EIF4A1-232ENST00000584712 SMARCA4P51532 1647 aa17.21■□□□□ 0.35
EIF4A1-232ENST00000584712 SUPT5HO00267 1087 aaKnown RBP17.13■□□□□ 0.33
EIF4A1-232ENST00000584712 EIF4G1Q04637 1599 aaKnown RBP17.13■□□□□ 0.33
EIF4A1-232ENST00000584712 PEG3Q9GZU2 1588 aa17.11■□□□□ 0.33
EIF4A1-232ENST00000584712 ATAD2BQ9ULI0 1458 aa17.03■□□□□ 0.32
EIF4A1-232ENST00000584712 SMARCA2P51531 1590 aa17.02■□□□□ 0.31
EIF4A1-232ENST00000584712 WIZO95785 1651 aa17.01■□□□□ 0.31
EIF4A1-232ENST00000584712 NCAPD3P42695 1498 aa16.99■□□□□ 0.31
EIF4A1-232ENST00000584712 TOP2AP11388 1531 aaKnown RBP16.91■□□□□ 0.3
EIF4A1-232ENST00000584712 HMGXB3Q12766 1538 aa16.9■□□□□ 0.3
EIF4A1-232ENST00000584712 CC2D2AQ9P2K1 1620 aa16.89■□□□□ 0.29
EIF4A1-232ENST00000584712 BAZ1BQ9UIG0 1483 aaKnown RBP16.87■□□□□ 0.29
EIF4A1-232ENST00000584712 CCDC88BA6NC98 1476 aa16.73■□□□□ 0.27
EIF4A1-232ENST00000584712 DNAJC5BQ9UF47 199 aa16.69■□□□□ 0.26
EIF4A1-232ENST00000584712 CFTRP13569 1480 aa16.51■□□□□ 0.23
EIF4A1-232ENST00000584712 CADPSQ9ULU8 1353 aa16.51■□□□□ 0.23
EIF4A1-232ENST00000584712 LAMC3Q9Y6N6 1575 aa16.4■□□□□ 0.22
EIF4A1-232ENST00000584712 CHIC1Q5VXU3 224 aa16.4■□□□□ 0.22
EIF4A1-232ENST00000584712 PRDM2Q13029 1718 aa16.3■□□□□ 0.2
EIF4A1-232ENST00000584712 PDS5BQ9NTI5 1447 aa16.29■□□□□ 0.2
EIF4A1-232ENST00000584712 NESP48681 1621 aa16.29■□□□□ 0.2
EIF4A1-232ENST00000584712 FANCD2Q9BXW9 1451 aa16.25■□□□□ 0.19
EIF4A1-232ENST00000584712 WRNQ14191 1432 aaPredicted RBP eCLIP16.24■□□□□ 0.193e-6■■■■□ 21.9
EIF4A1-232ENST00000584712 TRIM41Q8WV44 630 aa16.23■□□□□ 0.19
EIF4A1-232ENST00000584712 ABCC8Q09428 1581 aa16.2■□□□□ 0.18
EIF4A1-232ENST00000584712 CEP164Q9UPV0 1460 aa16.16■□□□□ 0.18
EIF4A1-232ENST00000584712 TOP2BQ02880 1626 aa16.14■□□□□ 0.17
EIF4A1-232ENST00000584712 SYNJ1O43426 1573 aa16.12■□□□□ 0.17
EIF4A1-232ENST00000584712 BIVM-ERCC5R4GMW8 1640 aa16.12■□□□□ 0.17
EIF4A1-232ENST00000584712 CUX1P39880 1505 aa16.11■□□□□ 0.17
EIF4A1-232ENST00000584712 DNMBPQ6XZF7 1577 aa16.07■□□□□ 0.16
EIF4A1-232ENST00000584712 KIF21AQ7Z4S6 1674 aa16.06■□□□□ 0.16
EIF4A1-232ENST00000584712 URB2Q14146 1524 aaKnown RBP16.04■□□□□ 0.16
EIF4A1-232ENST00000584712 TOPBP1Q92547 1522 aa16.04■□□□□ 0.16
EIF4A1-232ENST00000584712 MRC2Q9UBG0 1479 aa16.04■□□□□ 0.16
EIF4A1-232ENST00000584712 ERCC6Q03468 1493 aa16.01■□□□□ 0.15
EIF4A1-232ENST00000584712 WDR62O43379 1518 aa15.99■□□□□ 0.15
EIF4A1-232ENST00000584712 FGD5Q6ZNL6 1462 aa15.97■□□□□ 0.15
EIF4A1-232ENST00000584712 EEA1Q15075 1411 aa15.97■□□□□ 0.15
EIF4A1-232ENST00000584712 POLA1P09884 1462 aaPredicted RBP15.95■□□□□ 0.14
EIF4A1-232ENST00000584712 THOC2Q8NI27 1593 aaKnown RBP15.93■□□□□ 0.14
EIF4A1-232ENST00000584712 SOGA1O94964 1423 aa15.93■□□□□ 0.14
EIF4A1-232ENST00000584712 ABCA10Q8WWZ4 1543 aa15.89■□□□□ 0.13
EIF4A1-232ENST00000584712 KIF27Q86VH2 1401 aa15.88■□□□□ 0.13
EIF4A1-232ENST00000584712 CUX2O14529 1486 aa15.87■□□□□ 0.13
EIF4A1-232ENST00000584712 CSRNP3Q8WYN3 585 aa15.86■□□□□ 0.13
EIF4A1-232ENST00000584712 IFT140Q96RY7 1462 aa15.84■□□□□ 0.13
EIF4A1-232ENST00000584712 RAD54L2Q9Y4B4 1467 aa15.84■□□□□ 0.13
EIF4A1-232ENST00000584712 TARBP1Q13395 1621 aaKnown RBP15.84■□□□□ 0.13
EIF4A1-232ENST00000584712 RUSC2Q8N2Y8 1516 aa15.84■□□□□ 0.13
EIF4A1-232ENST00000584712 WDR97A6NE52 1622 aa15.79■□□□□ 0.12
EIF4A1-232ENST00000584712 IGF1RP08069 1367 aa15.78■□□□□ 0.12
EIF4A1-232ENST00000584712 FAM9AQ8IZU1 332 aaPredicted RBP15.78■□□□□ 0.12
EIF4A1-232ENST00000584712 TDRD9Q8NDG6 1382 aaKnown RBP15.74■□□□□ 0.11
EIF4A1-232ENST00000584712 GAPVD1Q14C86 1478 aa15.73■□□□□ 0.11
EIF4A1-232ENST00000584712 PRXQ9BXM0 1461 aa15.73■□□□□ 0.11
EIF4A1-232ENST00000584712 ABCA5Q8WWZ7 1642 aa15.73■□□□□ 0.11
EIF4A1-232ENST00000584712 ERICH3Q5RHP9 1530 aa15.72■□□□□ 0.11
EIF4A1-232ENST00000584712 KIF21BO75037 1637 aa15.69■□□□□ 0.1
EIF4A1-232ENST00000584712 AQRO60306 1485 aaKnown RBP eCLIP15.67■□□□□ 0.14e-7■■■□□ 18.3
EIF4A1-232ENST00000584712 CARMIL1Q5VZK9 1371 aa15.67■□□□□ 0.1
EIF4A1-232ENST00000584712 LOC105371045A0A1W2PR82 267 aa15.67■□□□□ 0.1
EIF4A1-232ENST00000584712 ZNF608Q9ULD9 1512 aaPredicted RBP15.67■□□□□ 0.1
EIF4A1-232ENST00000584712 GRIN2BQ13224 1484 aa15.66■□□□□ 0.1
EIF4A1-232ENST00000584712 GOLGA3Q08378 1498 aa15.64■□□□□ 0.09
EIF4A1-232ENST00000584712 CUL7Q14999 1698 aa15.63■□□□□ 0.09
EIF4A1-232ENST00000584712 RAPGEF2Q9Y4G8 1499 aa15.62■□□□□ 0.09
EIF4A1-232ENST00000584712 EIF4G3O43432 1585 aaKnown RBP15.61■□□□□ 0.09
EIF4A1-232ENST00000584712 TNIKQ9UKE5 1360 aa15.61■□□□□ 0.09
EIF4A1-232ENST00000584712 FHAD1B1AJZ9 1412 aa15.6■□□□□ 0.09
EIF4A1-232ENST00000584712 MAGI1Q96QZ7 1491 aaPredicted RBP15.58■□□□□ 0.08
EIF4A1-232ENST00000584712 PBRM1Q86U86 1689 aa15.57■□□□□ 0.08
EIF4A1-232ENST00000584712 UBTFP17480 764 aaKnown RBP15.53■□□□□ 0.08
EIF4A1-232ENST00000584712 ADAMTS12P58397 1594 aa15.53■□□□□ 0.08
EIF4A1-232ENST00000584712 SNAPC4Q5SXM2 1469 aa15.51■□□□□ 0.07
EIF4A1-232ENST00000584712 SYNJ2O15056 1496 aa15.5■□□□□ 0.07
EIF4A1-232ENST00000584712 GRIN2AQ12879 1464 aa15.46■□□□□ 0.06
EIF4A1-232ENST00000584712 CHMP7Q8WUX9 453 aaPredicted RBP15.44■□□□□ 0.06
EIF4A1-232ENST00000584712 EHMT2Q96KQ7 1210 aa15.44■□□□□ 0.06
EIF4A1-232ENST00000584712 CEP162Q5TB80 1403 aa15.42■□□□□ 0.06
EIF4A1-232ENST00000584712 NUP160Q12769 1436 aa15.4■□□□□ 0.06
EIF4A1-232ENST00000584712 KIAA0586Q9BVV6 1533 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms