RNA–Protein interactions for RNA: ENST00000344785.10

RBM38-202, Transcript of RNA binding motif protein 38, humanhuman

TSL 5

Gene RBM38, Length 2,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-202ENST00000344785 NISCHQ9Y2I1 1504 aa40.42■■■■■ 4.06
RBM38-202ENST00000344785 CCDC180Q9P1Z9 1646 aa34.69■■■■□ 3.14
RBM38-202ENST00000344785 ZCCHC6Q5VYS8 1495 aaKnown RBP34.06■■■■□ 3.04
RBM38-202ENST00000344785 SHROOM4Q9ULL8 1493 aa33.81■■■■□ 3
RBM38-202ENST00000344785 DCAF8L2P0C7V8 631 aa33.51■■■□□ 2.96
RBM38-202ENST00000344785 DCAF1Q9Y4B6 1507 aa33.22■■■□□ 2.91
RBM38-202ENST00000344785 SUPT5HO00267 1087 aaKnown RBP32.82■■■□□ 2.84
RBM38-202ENST00000344785 ABCC9O60706 1549 aa32.65■■■□□ 2.82
RBM38-202ENST00000344785 MYO15BQ96JP2 1530 aa32.53■■■□□ 2.8
RBM38-202ENST00000344785 SCRIBQ14160 1630 aa32.33■■■□□ 2.77
RBM38-202ENST00000344785 NACADO15069 1562 aa32.23■■■□□ 2.75
RBM38-202ENST00000344785 RB1CC1Q8TDY2 1594 aa31.82■■■□□ 2.68
RBM38-202ENST00000344785 RSF1Q96T23 1441 aaPredicted RBP31.72■■■□□ 2.67
RBM38-202ENST00000344785 CHIC1Q5VXU3 224 aa31.68■■■□□ 2.66
RBM38-202ENST00000344785 CECR2Q9BXF3 1484 aa31.57■■■□□ 2.64
RBM38-202ENST00000344785 MROH2BQ7Z745 1585 aa31.39■■■□□ 2.62
RBM38-202ENST00000344785 UNC13AQ9UPW8 1703 aa31.37■■■□□ 2.61
RBM38-202ENST00000344785 WIZO95785 1651 aa31.15■■■□□ 2.58
RBM38-202ENST00000344785 PABPN1Q86U42 306 aaKnown RBP eCLIP31.08■■■□□ 2.57
RBM38-202ENST00000344785 BAZ1AQ9NRL2 1556 aaPredicted RBP31.06■■■□□ 2.56
RBM38-202ENST00000344785 BICRAQ9NZM4 1560 aa31.06■■■□□ 2.56
RBM38-202ENST00000344785 SMARCA4P51532 1647 aa30.91■■■□□ 2.54
RBM38-202ENST00000344785 LOC105371045A0A1W2PR82 267 aa30.68■■■□□ 2.5
RBM38-202ENST00000344785 TOP2AP11388 1531 aaKnown RBP30.67■■■□□ 2.5
RBM38-202ENST00000344785 TRIM41Q8WV44 630 aa30.64■■■□□ 2.5
RBM38-202ENST00000344785 CCDC88BA6NC98 1476 aa30.54■■■□□ 2.48
RBM38-202ENST00000344785 EIF4G1Q04637 1599 aaKnown RBP30.5■■■□□ 2.47
RBM38-202ENST00000344785 SMARCA2P51531 1590 aa30.49■■■□□ 2.47
RBM38-202ENST00000344785 PEG3Q9GZU2 1588 aa30.41■■■□□ 2.46
RBM38-202ENST00000344785 FAM9AQ8IZU1 332 aaPredicted RBP30.33■■■□□ 2.45
RBM38-202ENST00000344785 ATAD2BQ9ULI0 1458 aa30.3■■■□□ 2.44
RBM38-202ENST00000344785 ABCC8Q09428 1581 aa30.19■■■□□ 2.42
RBM38-202ENST00000344785 BAZ1BQ9UIG0 1483 aaKnown RBP30.12■■■□□ 2.41
RBM38-202ENST00000344785 EHMT2Q96KQ7 1210 aa30.04■■■□□ 2.4
RBM38-202ENST00000344785 PCGF6Q9BYE7 350 aa29.87■■■□□ 2.37
RBM38-202ENST00000344785 NCAPD3P42695 1498 aa29.86■■■□□ 2.37
RBM38-202ENST00000344785 SOGA1O94964 1423 aa29.79■■■□□ 2.36
RBM38-202ENST00000344785 HMGXB3Q12766 1538 aa29.77■■■□□ 2.36
RBM38-202ENST00000344785 WRNQ14191 1432 aaPredicted RBP eCLIP29.77■■■□□ 2.36
RBM38-202ENST00000344785 RUSC2Q8N2Y8 1516 aa29.7■■■□□ 2.35
RBM38-202ENST00000344785 SYNJ1O43426 1573 aa29.68■■■□□ 2.34
RBM38-202ENST00000344785 CSRNP3Q8WYN3 585 aa29.53■■■□□ 2.32
RBM38-202ENST00000344785 TRIM26Q12899 539 aaPredicted RBP29.49■■■□□ 2.31
RBM38-202ENST00000344785 EEA1Q15075 1411 aa29.48■■■□□ 2.31
RBM38-202ENST00000344785 CC2D2AQ9P2K1 1620 aa29.44■■■□□ 2.3
RBM38-202ENST00000344785 HRCP23327 699 aa29.42■■■□□ 2.3
RBM38-202ENST00000344785 CFTRP13569 1480 aa29.41■■■□□ 2.3
RBM38-202ENST00000344785 TOP2BQ02880 1626 aa29.38■■■□□ 2.29
RBM38-202ENST00000344785 TNIKQ9UKE5 1360 aa29.31■■■□□ 2.28
RBM38-202ENST00000344785 BIVM-ERCC5R4GMW8 1640 aa29.28■■■□□ 2.28
RBM38-202ENST00000344785 CEP162Q5TB80 1403 aa29.28■■■□□ 2.28
RBM38-202ENST00000344785 PPARGC1BQ86YN6 1023 aaKnown RBP29.27■■■□□ 2.28
RBM38-202ENST00000344785 CUX1P39880 1505 aa29.26■■■□□ 2.28
RBM38-202ENST00000344785 UBTFP17480 764 aaKnown RBP29.26■■■□□ 2.28
RBM38-202ENST00000344785 GOLGA3Q08378 1498 aa29.24■■■□□ 2.27
RBM38-202ENST00000344785 CADPSQ9ULU8 1353 aa29.2■■■□□ 2.27
RBM38-202ENST00000344785 CEP164Q9UPV0 1460 aa29.16■■■□□ 2.26
RBM38-202ENST00000344785 KIF21BO75037 1637 aa29.14■■■□□ 2.26
RBM38-202ENST00000344785 PRDM2Q13029 1718 aa29.09■■■□□ 2.25
RBM38-202ENST00000344785 RAPGEF2Q9Y4G8 1499 aa29.09■■■□□ 2.25
RBM38-202ENST00000344785 DNAJC5BQ9UF47 199 aa28.96■■■□□ 2.23
RBM38-202ENST00000344785 NESP48681 1621 aa28.93■■■□□ 2.22
RBM38-202ENST00000344785 PRXQ9BXM0 1461 aa28.92■■■□□ 2.22
RBM38-202ENST00000344785 KIF27Q86VH2 1401 aa28.89■■■□□ 2.22
RBM38-202ENST00000344785 FANCD2Q9BXW9 1451 aa28.89■■■□□ 2.22
RBM38-202ENST00000344785 CLIP1P30622 1438 aa28.88■■■□□ 2.21
RBM38-202ENST00000344785 TTBK1Q5TCY1 1321 aaPredicted RBP28.88■■■□□ 2.21
RBM38-202ENST00000344785 RANGAP1P46060 587 aaPredicted RBP28.82■■■□□ 2.2
RBM38-202ENST00000344785 FGD5Q6ZNL6 1462 aa28.82■■■□□ 2.2
RBM38-202ENST00000344785 ERICH3Q5RHP9 1530 aa28.8■■■□□ 2.2
RBM38-202ENST00000344785 CUX2O14529 1486 aa28.77■■■□□ 2.2
RBM38-202ENST00000344785 IGF1RP08069 1367 aa28.72■■■□□ 2.19
RBM38-202ENST00000344785 VPS8Q8N3P4 1428 aa28.67■■■□□ 2.18
RBM38-202ENST00000344785 TOPBP1Q92547 1522 aa28.65■■■□□ 2.18
RBM38-202ENST00000344785 DNMBPQ6XZF7 1577 aa28.64■■■□□ 2.18
RBM38-202ENST00000344785 LAMC3Q9Y6N6 1575 aa28.64■■■□□ 2.18
RBM38-202ENST00000344785 RAD54L2Q9Y4B4 1467 aa28.62■■■□□ 2.17
RBM38-202ENST00000344785 POLA1P09884 1462 aaPredicted RBP28.59■■■□□ 2.17
RBM38-202ENST00000344785 ARAP1Q96P48 1450 aa28.55■■■□□ 2.16
RBM38-202ENST00000344785 URB2Q14146 1524 aaKnown RBP28.55■■■□□ 2.16
RBM38-202ENST00000344785 CARMIL1Q5VZK9 1371 aa28.53■■■□□ 2.16
RBM38-202ENST00000344785 ABCA10Q8WWZ4 1543 aa28.49■■■□□ 2.15
RBM38-202ENST00000344785 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.47■■■□□ 2.15
RBM38-202ENST00000344785 ZEB1P37275 1124 aaPredicted RBP28.47■■■□□ 2.15
RBM38-202ENST00000344785 PDS5BQ9NTI5 1447 aa28.46■■■□□ 2.15
RBM38-202ENST00000344785 ARHGAP35Q9NRY4 1499 aa28.43■■■□□ 2.14
RBM38-202ENST00000344785 KIF21AQ7Z4S6 1674 aa28.4■■■□□ 2.14
RBM38-202ENST00000344785 APLP2Q06481 763 aa28.37■■■□□ 2.13
RBM38-202ENST00000344785 TDRD9Q8NDG6 1382 aaKnown RBP28.31■■■□□ 2.12
RBM38-202ENST00000344785 KANK4Q5T7N3 995 aaPredicted RBP28.3■■■□□ 2.12
RBM38-202ENST00000344785 WDR97A6NE52 1622 aa28.3■■■□□ 2.12
RBM38-202ENST00000344785 CCER1Q8TC90 406 aaPredicted RBP28.28■■■□□ 2.12
RBM38-202ENST00000344785 HNRNPUL2Q1KMD3 747 aaKnown RBP28.2■■■□□ 2.1
RBM38-202ENST00000344785 ABCA5Q8WWZ7 1642 aa28.19■■■□□ 2.1
RBM38-202ENST00000344785 CUL7Q14999 1698 aa28.17■■■□□ 2.1
RBM38-202ENST00000344785 GAPVD1Q14C86 1478 aa28.16■■■□□ 2.1
RBM38-202ENST00000344785 TARBP1Q13395 1621 aaKnown RBP28.14■■■□□ 2.1
RBM38-202ENST00000344785 P3H3Q8IVL6 736 aa28.13■■■□□ 2.09
RBM38-202ENST00000344785 MRC2Q9UBG0 1479 aa28.08■■■□□ 2.09
RBM38-202ENST00000344785 FHOD3Q2V2M9 1422 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms