RNA–Protein interactions for RNA: ENST00000581544.5

EIF4A1-218, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 1,444 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-218ENST00000581544 NISCHQ9Y2I1 1504 aa26.25■■□□□ 1.79
EIF4A1-218ENST00000581544 CCDC180Q9P1Z9 1646 aa22.96■■□□□ 1.27
EIF4A1-218ENST00000581544 ZCCHC6Q5VYS8 1495 aaKnown RBP22.08■■□□□ 1.13
EIF4A1-218ENST00000581544 DCAF1Q9Y4B6 1507 aa21.79■■□□□ 1.08
EIF4A1-218ENST00000581544 MYO15BQ96JP2 1530 aa21.55■■□□□ 1.04
EIF4A1-218ENST00000581544 ABCC9O60706 1549 aa21.52■■□□□ 1.04
EIF4A1-218ENST00000581544 NACADO15069 1562 aa21.33■■□□□ 1.01
EIF4A1-218ENST00000581544 DCAF8L2P0C7V8 631 aa21.3■■□□□ 1
EIF4A1-218ENST00000581544 SHROOM4Q9ULL8 1493 aa21.16■□□□□ 0.98
EIF4A1-218ENST00000581544 RB1CC1Q8TDY2 1594 aa21.1■□□□□ 0.97
EIF4A1-218ENST00000581544 SCRIBQ14160 1630 aa20.97■□□□□ 0.95
EIF4A1-218ENST00000581544 UNC13AQ9UPW8 1703 aa20.83■□□□□ 0.93
EIF4A1-218ENST00000581544 BICRAQ9NZM4 1560 aa20.59■□□□□ 0.89
EIF4A1-218ENST00000581544 CECR2Q9BXF3 1484 aa20.37■□□□□ 0.85
EIF4A1-218ENST00000581544 RSF1Q96T23 1441 aaPredicted RBP20.34■□□□□ 0.85
EIF4A1-218ENST00000581544 SUPT5HO00267 1087 aaKnown RBP20.3■□□□□ 0.84
EIF4A1-218ENST00000581544 MROH2BQ7Z745 1585 aa20.27■□□□□ 0.84
EIF4A1-218ENST00000581544 BAZ1AQ9NRL2 1556 aaPredicted RBP20.24■□□□□ 0.83
EIF4A1-218ENST00000581544 PABPN1Q86U42 306 aaKnown RBP eCLIP20.23■□□□□ 0.83
EIF4A1-218ENST00000581544 SMARCA4P51532 1647 aa20.19■□□□□ 0.82
EIF4A1-218ENST00000581544 WIZO95785 1651 aa20.1■□□□□ 0.81
EIF4A1-218ENST00000581544 PEG3Q9GZU2 1588 aa20.03■□□□□ 0.8
EIF4A1-218ENST00000581544 TOP2AP11388 1531 aaKnown RBP19.9■□□□□ 0.78
EIF4A1-218ENST00000581544 EIF4G1Q04637 1599 aaKnown RBP19.88■□□□□ 0.77
EIF4A1-218ENST00000581544 ATAD2BQ9ULI0 1458 aa19.84■□□□□ 0.77
EIF4A1-218ENST00000581544 SMARCA2P51531 1590 aa19.8■□□□□ 0.76
EIF4A1-218ENST00000581544 NCAPD3P42695 1498 aa19.69■□□□□ 0.74
EIF4A1-218ENST00000581544 HMGXB3Q12766 1538 aa19.68■□□□□ 0.74
EIF4A1-218ENST00000581544 CCDC88BA6NC98 1476 aa19.66■□□□□ 0.74
EIF4A1-218ENST00000581544 BAZ1BQ9UIG0 1483 aaKnown RBP19.64■□□□□ 0.74
EIF4A1-218ENST00000581544 CHIC1Q5VXU3 224 aa19.59■□□□□ 0.73
EIF4A1-218ENST00000581544 CC2D2AQ9P2K1 1620 aa19.58■□□□□ 0.72
EIF4A1-218ENST00000581544 CFTRP13569 1480 aa19.24■□□□□ 0.67
EIF4A1-218ENST00000581544 PRDM2Q13029 1718 aa19.23■□□□□ 0.67
EIF4A1-218ENST00000581544 ABCC8Q09428 1581 aa19.22■□□□□ 0.67
EIF4A1-218ENST00000581544 TRIM41Q8WV44 630 aa19.12■□□□□ 0.65
EIF4A1-218ENST00000581544 CADPSQ9ULU8 1353 aa19.12■□□□□ 0.65
EIF4A1-218ENST00000581544 SYNJ1O43426 1573 aa19.08■□□□□ 0.64
EIF4A1-218ENST00000581544 WRNQ14191 1432 aaPredicted RBP eCLIP19.08■□□□□ 0.643e-6■■■■□ 21.9
EIF4A1-218ENST00000581544 DNAJC5BQ9UF47 199 aa19.08■□□□□ 0.64
EIF4A1-218ENST00000581544 BIVM-ERCC5R4GMW8 1640 aa19.04■□□□□ 0.64
EIF4A1-218ENST00000581544 TOP2BQ02880 1626 aa19.02■□□□□ 0.63
EIF4A1-218ENST00000581544 LAMC3Q9Y6N6 1575 aa19.01■□□□□ 0.63
EIF4A1-218ENST00000581544 CUX1P39880 1505 aa18.96■□□□□ 0.63
EIF4A1-218ENST00000581544 NESP48681 1621 aa18.95■□□□□ 0.62
EIF4A1-218ENST00000581544 FANCD2Q9BXW9 1451 aa18.89■□□□□ 0.62
EIF4A1-218ENST00000581544 SOGA1O94964 1423 aa18.85■□□□□ 0.61
EIF4A1-218ENST00000581544 EEA1Q15075 1411 aa18.81■□□□□ 0.6
EIF4A1-218ENST00000581544 RUSC2Q8N2Y8 1516 aa18.81■□□□□ 0.6
EIF4A1-218ENST00000581544 KIF21AQ7Z4S6 1674 aa18.79■□□□□ 0.6
EIF4A1-218ENST00000581544 DNMBPQ6XZF7 1577 aa18.78■□□□□ 0.6
EIF4A1-218ENST00000581544 LOC105371045A0A1W2PR82 267 aa18.76■□□□□ 0.59
EIF4A1-218ENST00000581544 PDS5BQ9NTI5 1447 aa18.76■□□□□ 0.59
EIF4A1-218ENST00000581544 CEP164Q9UPV0 1460 aa18.76■□□□□ 0.59
EIF4A1-218ENST00000581544 TOPBP1Q92547 1522 aa18.73■□□□□ 0.59
EIF4A1-218ENST00000581544 URB2Q14146 1524 aaKnown RBP18.72■□□□□ 0.59
EIF4A1-218ENST00000581544 FAM9AQ8IZU1 332 aaPredicted RBP18.71■□□□□ 0.59
EIF4A1-218ENST00000581544 FGD5Q6ZNL6 1462 aa18.69■□□□□ 0.58
EIF4A1-218ENST00000581544 KIF21BO75037 1637 aa18.65■□□□□ 0.58
EIF4A1-218ENST00000581544 CSRNP3Q8WYN3 585 aa18.64■□□□□ 0.57
EIF4A1-218ENST00000581544 POLA1P09884 1462 aaPredicted RBP18.63■□□□□ 0.57
EIF4A1-218ENST00000581544 WDR97A6NE52 1622 aa18.62■□□□□ 0.57
EIF4A1-218ENST00000581544 ABCA10Q8WWZ4 1543 aa18.58■□□□□ 0.57
EIF4A1-218ENST00000581544 MRC2Q9UBG0 1479 aa18.57■□□□□ 0.56
EIF4A1-218ENST00000581544 KIF27Q86VH2 1401 aa18.56■□□□□ 0.56
EIF4A1-218ENST00000581544 PRXQ9BXM0 1461 aa18.55■□□□□ 0.56
EIF4A1-218ENST00000581544 WDR62O43379 1518 aa18.54■□□□□ 0.56
EIF4A1-218ENST00000581544 RAD54L2Q9Y4B4 1467 aa18.53■□□□□ 0.56
EIF4A1-218ENST00000581544 TARBP1Q13395 1621 aaKnown RBP18.53■□□□□ 0.56
EIF4A1-218ENST00000581544 CUX2O14529 1486 aa18.52■□□□□ 0.56
EIF4A1-218ENST00000581544 GOLGA3Q08378 1498 aa18.52■□□□□ 0.56
EIF4A1-218ENST00000581544 THOC2Q8NI27 1593 aaKnown RBP18.52■□□□□ 0.56
EIF4A1-218ENST00000581544 ERICH3Q5RHP9 1530 aa18.51■□□□□ 0.55
EIF4A1-218ENST00000581544 TNIKQ9UKE5 1360 aa18.49■□□□□ 0.55
EIF4A1-218ENST00000581544 ABCA5Q8WWZ7 1642 aa18.48■□□□□ 0.55
EIF4A1-218ENST00000581544 RAPGEF2Q9Y4G8 1499 aa18.48■□□□□ 0.55
EIF4A1-218ENST00000581544 IGF1RP08069 1367 aa18.47■□□□□ 0.55
EIF4A1-218ENST00000581544 ERCC6Q03468 1493 aa18.38■□□□□ 0.53
EIF4A1-218ENST00000581544 CEP162Q5TB80 1403 aa18.36■□□□□ 0.53
EIF4A1-218ENST00000581544 CUL7Q14999 1698 aa18.36■□□□□ 0.53
EIF4A1-218ENST00000581544 EHMT2Q96KQ7 1210 aa18.35■□□□□ 0.53
EIF4A1-218ENST00000581544 IFT140Q96RY7 1462 aa18.34■□□□□ 0.53
EIF4A1-218ENST00000581544 GAPVD1Q14C86 1478 aa18.33■□□□□ 0.52
EIF4A1-218ENST00000581544 CARMIL1Q5VZK9 1371 aa18.32■□□□□ 0.52
EIF4A1-218ENST00000581544 PBRM1Q86U86 1689 aa18.31■□□□□ 0.52
EIF4A1-218ENST00000581544 TDRD9Q8NDG6 1382 aaKnown RBP18.3■□□□□ 0.52
EIF4A1-218ENST00000581544 UBTFP17480 764 aaKnown RBP18.27■□□□□ 0.52
EIF4A1-218ENST00000581544 ZNF608Q9ULD9 1512 aaPredicted RBP18.25■□□□□ 0.51
EIF4A1-218ENST00000581544 EIF4G3O43432 1585 aaKnown RBP18.22■□□□□ 0.51
EIF4A1-218ENST00000581544 AQRO60306 1485 aaKnown RBP eCLIP18.21■□□□□ 0.512e-7■■■■□ 20.2
EIF4A1-218ENST00000581544 CLIP1P30622 1438 aa18.2■□□□□ 0.5
EIF4A1-218ENST00000581544 ADAMTS12P58397 1594 aa18.2■□□□□ 0.5
EIF4A1-218ENST00000581544 GRIN2BQ13224 1484 aa18.19■□□□□ 0.5
EIF4A1-218ENST00000581544 CTTNBP2Q8WZ74 1663 aa18.17■□□□□ 0.5
EIF4A1-218ENST00000581544 FHAD1B1AJZ9 1412 aa18.14■□□□□ 0.49
EIF4A1-218ENST00000581544 ARAP1Q96P48 1450 aa18.12■□□□□ 0.49
EIF4A1-218ENST00000581544 ARHGAP35Q9NRY4 1499 aa18.11■□□□□ 0.49
EIF4A1-218ENST00000581544 VPS8Q8N3P4 1428 aa18.08■□□□□ 0.49
EIF4A1-218ENST00000581544 MAGI1Q96QZ7 1491 aaPredicted RBP18.07■□□□□ 0.48
EIF4A1-218ENST00000581544 SNAPC4Q5SXM2 1469 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms