RNA–Protein interactions for RNA: ENST00000580461.5

EIF4A1-214, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 909 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-214ENST00000580461 NISCHQ9Y2I1 1504 aa30.6■■■□□ 2.49
EIF4A1-214ENST00000580461 ABCC9O60706 1549 aa28.69■■■□□ 2.18
EIF4A1-214ENST00000580461 CCDC180Q9P1Z9 1646 aa27.92■■■□□ 2.06
EIF4A1-214ENST00000580461 DNAJC5BQ9UF47 199 aa27.71■■■□□ 2.03
EIF4A1-214ENST00000580461 RB1CC1Q8TDY2 1594 aa26.9■■□□□ 1.9
EIF4A1-214ENST00000580461 UNC13AQ9UPW8 1703 aa26.55■■□□□ 1.84
EIF4A1-214ENST00000580461 NACADO15069 1562 aa26.5■■□□□ 1.83
EIF4A1-214ENST00000580461 PABPN1Q86U42 306 aaKnown RBP eCLIP26.48■■□□□ 1.83
EIF4A1-214ENST00000580461 BICRAQ9NZM4 1560 aa26.3■■□□□ 1.8
EIF4A1-214ENST00000580461 DNAJC5Q9H3Z4 198 aa25.98■■□□□ 1.75
EIF4A1-214ENST00000580461 DCAF8L2P0C7V8 631 aa25.95■■□□□ 1.74
EIF4A1-214ENST00000580461 CC2D2AQ9P2K1 1620 aa25.93■■□□□ 1.74
EIF4A1-214ENST00000580461 CECR2Q9BXF3 1484 aa25.91■■□□□ 1.74
EIF4A1-214ENST00000580461 MYO15BQ96JP2 1530 aa25.85■■□□□ 1.73
EIF4A1-214ENST00000580461 SHROOM4Q9ULL8 1493 aa25.69■■□□□ 1.7
EIF4A1-214ENST00000580461 EIF4G1Q04637 1599 aaKnown RBP25.65■■□□□ 1.7
EIF4A1-214ENST00000580461 SCRIBQ14160 1630 aa25.37■■□□□ 1.65
EIF4A1-214ENST00000580461 ZCCHC6Q5VYS8 1495 aaKnown RBP25.3■■□□□ 1.64
EIF4A1-214ENST00000580461 DCAF1Q9Y4B6 1507 aa25.21■■□□□ 1.63
EIF4A1-214ENST00000580461 CUX2O14529 1486 aa25.05■■□□□ 1.6
EIF4A1-214ENST00000580461 ERCC6Q03468 1493 aa24.74■■□□□ 1.55
EIF4A1-214ENST00000580461 THOC2Q8NI27 1593 aaKnown RBP24.46■■□□□ 1.51
EIF4A1-214ENST00000580461 NCAPD3P42695 1498 aa24.45■■□□□ 1.51
EIF4A1-214ENST00000580461 NESP48681 1621 aa24.45■■□□□ 1.5
EIF4A1-214ENST00000580461 TRIM41Q8WV44 630 aa24.43■■□□□ 1.5
EIF4A1-214ENST00000580461 ATAD2BQ9ULI0 1458 aa24.29■■□□□ 1.48
EIF4A1-214ENST00000580461 HMGXB3Q12766 1538 aa24.25■■□□□ 1.47
EIF4A1-214ENST00000580461 KIF21AQ7Z4S6 1674 aa24.19■■□□□ 1.46
EIF4A1-214ENST00000580461 SMARCA2P51531 1590 aa24.16■■□□□ 1.46
EIF4A1-214ENST00000580461 SMARCA4P51532 1647 aa24.11■■□□□ 1.45
EIF4A1-214ENST00000580461 LAMC3Q9Y6N6 1575 aa24.08■■□□□ 1.45
EIF4A1-214ENST00000580461 BAZ1BQ9UIG0 1483 aaKnown RBP23.97■■□□□ 1.43
EIF4A1-214ENST00000580461 BAZ1AQ9NRL2 1556 aaPredicted RBP23.93■■□□□ 1.42
EIF4A1-214ENST00000580461 PEG3Q9GZU2 1588 aa23.88■■□□□ 1.41
EIF4A1-214ENST00000580461 PDS5BQ9NTI5 1447 aa23.85■■□□□ 1.41
EIF4A1-214ENST00000580461 WDR62O43379 1518 aa23.84■■□□□ 1.41
EIF4A1-214ENST00000580461 MRC2Q9UBG0 1479 aa23.8■■□□□ 1.4
EIF4A1-214ENST00000580461 RIMBP3CA6NJZ7 1639 aa23.66■■□□□ 1.38
EIF4A1-214ENST00000580461 RIMBP3BA6NNM3 1639 aa23.66■■□□□ 1.38
EIF4A1-214ENST00000580461 RIMBP3Q9UFD9 1639 aa23.66■■□□□ 1.38
EIF4A1-214ENST00000580461 CADPSQ9ULU8 1353 aa23.62■■□□□ 1.37
EIF4A1-214ENST00000580461 OSCARQ8IYS5 282 aa23.61■■□□□ 1.37
EIF4A1-214ENST00000580461 MROH2BQ7Z745 1585 aa23.61■■□□□ 1.37
EIF4A1-214ENST00000580461 CEP164Q9UPV0 1460 aa23.51■■□□□ 1.35
EIF4A1-214ENST00000580461 ARHGEF11O15085 1522 aa23.43■■□□□ 1.34
EIF4A1-214ENST00000580461 FANCD2Q9BXW9 1451 aa23.41■■□□□ 1.34
EIF4A1-214ENST00000580461 URB2Q14146 1524 aaKnown RBP23.35■■□□□ 1.33
EIF4A1-214ENST00000580461 WIZO95785 1651 aa23.32■■□□□ 1.32
EIF4A1-214ENST00000580461 RSF1Q96T23 1441 aaPredicted RBP23.24■■□□□ 1.31
EIF4A1-214ENST00000580461 CFTRP13569 1480 aa23.24■■□□□ 1.31
EIF4A1-214ENST00000580461 ZNF608Q9ULD9 1512 aaPredicted RBP23.2■■□□□ 1.3
EIF4A1-214ENST00000580461 ARAP1Q96P48 1450 aa23.17■■□□□ 1.3
EIF4A1-214ENST00000580461 CYB5RLQ6IPT4 315 aa23.16■■□□□ 1.3
EIF4A1-214ENST00000580461 TRHP20396 242 aaPredicted RBP23.12■■□□□ 1.29
EIF4A1-214ENST00000580461 CHD1O14646 1710 aa23.11■■□□□ 1.29
EIF4A1-214ENST00000580461 PRDM2Q13029 1718 aa23.11■■□□□ 1.29
EIF4A1-214ENST00000580461 EIF4G3O43432 1585 aaKnown RBP23.07■■□□□ 1.28
EIF4A1-214ENST00000580461 IFT140Q96RY7 1462 aa23.05■■□□□ 1.28
EIF4A1-214ENST00000580461 AEBP2Q6ZN18 517 aaPredicted RBP23.04■■□□□ 1.28
EIF4A1-214ENST00000580461 SUPT5HO00267 1087 aaKnown RBP22.94■■□□□ 1.26
EIF4A1-214ENST00000580461 TOP2AP11388 1531 aaKnown RBP22.92■■□□□ 1.26
EIF4A1-214ENST00000580461 TOPBP1Q92547 1522 aa22.91■■□□□ 1.26
EIF4A1-214ENST00000580461 TARBP1Q13395 1621 aaKnown RBP22.86■■□□□ 1.25
EIF4A1-214ENST00000580461 AQRO60306 1485 aaKnown RBP eCLIP22.81■■□□□ 1.244e-7■■■□□ 18.3
EIF4A1-214ENST00000580461 CLASP1Q7Z460 1538 aa22.77■■□□□ 1.24
EIF4A1-214ENST00000580461 DNMBPQ6XZF7 1577 aa22.76■■□□□ 1.23
EIF4A1-214ENST00000580461 FBLN2P98095 1184 aa22.68■■□□□ 1.22
EIF4A1-214ENST00000580461 ABCC8Q09428 1581 aa22.67■■□□□ 1.22
EIF4A1-214ENST00000580461 CCDC88BA6NC98 1476 aa22.67■■□□□ 1.22
EIF4A1-214ENST00000580461 POLA1P09884 1462 aaPredicted RBP22.62■■□□□ 1.21
EIF4A1-214ENST00000580461 SNAPC4Q5SXM2 1469 aa22.58■■□□□ 1.2
EIF4A1-214ENST00000580461 SYNJ1O43426 1573 aa22.58■■□□□ 1.2
EIF4A1-214ENST00000580461 RAD54L2Q9Y4B4 1467 aa22.54■■□□□ 1.2
EIF4A1-214ENST00000580461 TDRD9Q8NDG6 1382 aaKnown RBP22.5■■□□□ 1.19
EIF4A1-214ENST00000580461 GAPVD1Q14C86 1478 aa22.49■■□□□ 1.19
EIF4A1-214ENST00000580461 WDR97A6NE52 1622 aa22.47■■□□□ 1.19
EIF4A1-214ENST00000580461 MAGI1Q96QZ7 1491 aaPredicted RBP22.44■■□□□ 1.18
EIF4A1-214ENST00000580461 KIF13AQ9H1H9 1805 aa22.43■■□□□ 1.18
EIF4A1-214ENST00000580461 ERCC6L2Q5T890 1561 aa22.4■■□□□ 1.18
EIF4A1-214ENST00000580461 SOGA1O94964 1423 aa22.4■■□□□ 1.18
EIF4A1-214ENST00000580461 SYNJ2O15056 1496 aa22.39■■□□□ 1.17
EIF4A1-214ENST00000580461 CHMP7Q8WUX9 453 aaPredicted RBP22.37■■□□□ 1.17
EIF4A1-214ENST00000580461 PBRM1Q86U86 1689 aa22.36■■□□□ 1.17
EIF4A1-214ENST00000580461 FGD5Q6ZNL6 1462 aa22.34■■□□□ 1.17
EIF4A1-214ENST00000580461 GRIN2BQ13224 1484 aa22.34■■□□□ 1.17
EIF4A1-214ENST00000580461 ILDR1Q86SU0 546 aaPredicted RBP22.33■■□□□ 1.17
EIF4A1-214ENST00000580461 CUX1P39880 1505 aa22.23■■□□□ 1.15
EIF4A1-214ENST00000580461 CEP170Q5SW79 1584 aa22.2■■□□□ 1.14
EIF4A1-214ENST00000580461 ABCA5Q8WWZ7 1642 aa22.18■■□□□ 1.14
EIF4A1-214ENST00000580461 SHROOM2Q13796 1616 aa22.16■■□□□ 1.14
EIF4A1-214ENST00000580461 KDM4FA0A1W2PPD8 638 aa22.14■■□□□ 1.13
EIF4A1-214ENST00000580461 GRIN2AQ12879 1464 aa22.09■■□□□ 1.13
EIF4A1-214ENST00000580461 NUP160Q12769 1436 aa22.06■■□□□ 1.12
EIF4A1-214ENST00000580461 ADAMTS12P58397 1594 aa22.05■■□□□ 1.12
EIF4A1-214ENST00000580461 ABCA10Q8WWZ4 1543 aa22.03■■□□□ 1.12
EIF4A1-214ENST00000580461 DIP2BQ9P265 1576 aa22.03■■□□□ 1.12
EIF4A1-214ENST00000580461 KDM6BO15054 1643 aa22.01■■□□□ 1.11
EIF4A1-214ENST00000580461 ABCC10Q5T3U5 1492 aa22.01■■□□□ 1.11
EIF4A1-214ENST00000580461 WRNQ14191 1432 aaPredicted RBP eCLIP21.97■■□□□ 1.113e-6■■■■□ 21.9
EIF4A1-214ENST00000580461 MAPKBP1O60336 1514 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms