RNA–Protein interactions for RNA: ENST00000396527.7

EIF4A1-202, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 1,169 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-202ENST00000396527 AEBP2Q6ZN18 517 aaPredicted RBP18.04■□□□□ 0.48
EIF4A1-202ENST00000396527 NISCHQ9Y2I1 1504 aa16.91■□□□□ 0.3
EIF4A1-202ENST00000396527 CHIC1Q5VXU3 224 aa16.86■□□□□ 0.29
EIF4A1-202ENST00000396527 SENP3Q9H4L4 574 aaPredicted RBP15.45■□□□□ 0.06
EIF4A1-202ENST00000396527 PHF23Q9BUL5 403 aaPredicted RBP15.2■□□□□ 0.02
EIF4A1-202ENST00000396527 CCDC180Q9P1Z9 1646 aa15.1■□□□□ 0.01
EIF4A1-202ENST00000396527 ABCC9O60706 1549 aa15.05■□□□□ -0
EIF4A1-202ENST00000396527 FOXD1Q16676 465 aa14.44□□□□□ -0.1
EIF4A1-202ENST00000396527 RB1CC1Q8TDY2 1594 aa14.37□□□□□ -0.11
EIF4A1-202ENST00000396527 DCAF8L2P0C7V8 631 aa14.35□□□□□ -0.11
EIF4A1-202ENST00000396527 NACADO15069 1562 aa14.29□□□□□ -0.12
EIF4A1-202ENST00000396527 MYO15BQ96JP2 1530 aa14.11□□□□□ -0.15
EIF4A1-202ENST00000396527 ZCCHC6Q5VYS8 1495 aaKnown RBP14.11□□□□□ -0.15
EIF4A1-202ENST00000396527 PABPN1Q86U42 306 aaKnown RBP eCLIP14.07□□□□□ -0.16
EIF4A1-202ENST00000396527 DNAJC5BQ9UF47 199 aa14.01□□□□□ -0.17
EIF4A1-202ENST00000396527 DCAF1Q9Y4B6 1507 aa13.97□□□□□ -0.17
EIF4A1-202ENST00000396527 UNC13AQ9UPW8 1703 aa13.95□□□□□ -0.18
EIF4A1-202ENST00000396527 POTEDQ86YR6 584 aa13.94□□□□□ -0.18
EIF4A1-202ENST00000396527 BICRAQ9NZM4 1560 aa13.88□□□□□ -0.19
EIF4A1-202ENST00000396527 SHROOM4Q9ULL8 1493 aa13.85□□□□□ -0.19
EIF4A1-202ENST00000396527 SCRIBQ14160 1630 aa13.79□□□□□ -0.2
EIF4A1-202ENST00000396527 MSH5O43196 834 aa13.64□□□□□ -0.23
EIF4A1-202ENST00000396527 CC2D2AQ9P2K1 1620 aa13.57□□□□□ -0.24
EIF4A1-202ENST00000396527 EIF4G1Q04637 1599 aaKnown RBP13.57□□□□□ -0.24
EIF4A1-202ENST00000396527 CECR2Q9BXF3 1484 aa13.55□□□□□ -0.24
EIF4A1-202ENST00000396527 SUPT5HO00267 1087 aaKnown RBP13.53□□□□□ -0.24
EIF4A1-202ENST00000396527 PIAS4Q8N2W9 510 aaPredicted RBP13.43□□□□□ -0.26
EIF4A1-202ENST00000396527 PLPPR3Q6T4P5 718 aa13.25□□□□□ -0.29
EIF4A1-202ENST00000396527 PPP6R1Q9UPN7 881 aa13.23□□□□□ -0.29
EIF4A1-202ENST00000396527 NCAPD3P42695 1498 aa13.19□□□□□ -0.3
EIF4A1-202ENST00000396527 ADRA2BP18089 450 aa13.18□□□□□ -0.3
EIF4A1-202ENST00000396527 ATAD2BQ9ULI0 1458 aa13.16□□□□□ -0.3
EIF4A1-202ENST00000396527 SMARCA4P51532 1647 aa13.15□□□□□ -0.3
EIF4A1-202ENST00000396527 SMARCA2P51531 1590 aa13.15□□□□□ -0.3
EIF4A1-202ENST00000396527 RSF1Q96T23 1441 aaPredicted RBP13.14□□□□□ -0.31
EIF4A1-202ENST00000396527 BAZ1AQ9NRL2 1556 aaPredicted RBP13.14□□□□□ -0.31
EIF4A1-202ENST00000396527 HMGXB3Q12766 1538 aa13.08□□□□□ -0.31
EIF4A1-202ENST00000396527 BAZ1BQ9UIG0 1483 aaKnown RBP13.06□□□□□ -0.32
EIF4A1-202ENST00000396527 ERCC6Q03468 1493 aa13.03□□□□□ -0.32
EIF4A1-202ENST00000396527 MROH2BQ7Z745 1585 aa13.03□□□□□ -0.32
EIF4A1-202ENST00000396527 PEG3Q9GZU2 1588 aa13.01□□□□□ -0.33
EIF4A1-202ENST00000396527 CUX2O14529 1486 aa12.93□□□□□ -0.34
EIF4A1-202ENST00000396527 NESP48681 1621 aa12.93□□□□□ -0.34
EIF4A1-202ENST00000396527 LAMC3Q9Y6N6 1575 aa12.87□□□□□ -0.35
EIF4A1-202ENST00000396527 WIZO95785 1651 aa12.86□□□□□ -0.35
EIF4A1-202ENST00000396527 PDS5BQ9NTI5 1447 aa12.85□□□□□ -0.35
EIF4A1-202ENST00000396527 DNAJC5Q9H3Z4 198 aa12.84□□□□□ -0.35
EIF4A1-202ENST00000396527 CADPSQ9ULU8 1353 aa12.82□□□□□ -0.36
EIF4A1-202ENST00000396527 THOC2Q8NI27 1593 aaKnown RBP12.74□□□□□ -0.37
EIF4A1-202ENST00000396527 KIF21AQ7Z4S6 1674 aa12.73□□□□□ -0.37
EIF4A1-202ENST00000396527 TRIM41Q8WV44 630 aa12.73□□□□□ -0.37
EIF4A1-202ENST00000396527 TOP2AP11388 1531 aaKnown RBP12.72□□□□□ -0.37
EIF4A1-202ENST00000396527 MRC2Q9UBG0 1479 aa12.69□□□□□ -0.38
EIF4A1-202ENST00000396527 CFTRP13569 1480 aa12.67□□□□□ -0.38
EIF4A1-202ENST00000396527 CEP164Q9UPV0 1460 aa12.67□□□□□ -0.38
EIF4A1-202ENST00000396527 LOC105371045A0A1W2PR82 267 aa12.67□□□□□ -0.38
EIF4A1-202ENST00000396527 FANCD2Q9BXW9 1451 aa12.66□□□□□ -0.38
EIF4A1-202ENST00000396527 CCDC88BA6NC98 1476 aa12.63□□□□□ -0.39
EIF4A1-202ENST00000396527 WDR62O43379 1518 aa12.62□□□□□ -0.39
EIF4A1-202ENST00000396527 URB2Q14146 1524 aaKnown RBP12.52□□□□□ -0.4
EIF4A1-202ENST00000396527 PRDM2Q13029 1718 aa12.48□□□□□ -0.41
EIF4A1-202ENST00000396527 FAM9AQ8IZU1 332 aaPredicted RBP12.47□□□□□ -0.41
EIF4A1-202ENST00000396527 ABCC8Q09428 1581 aa12.44□□□□□ -0.42
EIF4A1-202ENST00000396527 TOPBP1Q92547 1522 aa12.42□□□□□ -0.42
EIF4A1-202ENST00000396527 IFT140Q96RY7 1462 aa12.42□□□□□ -0.42
EIF4A1-202ENST00000396527 OSCARQ8IYS5 282 aa12.42□□□□□ -0.42
EIF4A1-202ENST00000396527 PCGF6Q9BYE7 350 aa12.38□□□□□ -0.43
EIF4A1-202ENST00000396527 DNMBPQ6XZF7 1577 aa12.38□□□□□ -0.43
EIF4A1-202ENST00000396527 ZNF608Q9ULD9 1512 aaPredicted RBP12.36□□□□□ -0.43
EIF4A1-202ENST00000396527 EEA1Q15075 1411 aa12.36□□□□□ -0.43
EIF4A1-202ENST00000396527 TRIM26Q12899 539 aaPredicted RBP12.35□□□□□ -0.43
EIF4A1-202ENST00000396527 WRNQ14191 1432 aaPredicted RBP eCLIP12.34□□□□□ -0.433e-6■■■■□ 21.9
EIF4A1-202ENST00000396527 CSRNP3Q8WYN3 585 aa12.31□□□□□ -0.44
EIF4A1-202ENST00000396527 POLA1P09884 1462 aaPredicted RBP12.3□□□□□ -0.44
EIF4A1-202ENST00000396527 HRCP23327 699 aa12.3□□□□□ -0.44
EIF4A1-202ENST00000396527 SOGA1O94964 1423 aa12.28□□□□□ -0.44
EIF4A1-202ENST00000396527 AQRO60306 1485 aaKnown RBP eCLIP12.28□□□□□ -0.442e-7■■■■□ 20.2
EIF4A1-202ENST00000396527 EIF4G3O43432 1585 aaKnown RBP12.28□□□□□ -0.44
EIF4A1-202ENST00000396527 TARBP1Q13395 1621 aaKnown RBP12.26□□□□□ -0.45
EIF4A1-202ENST00000396527 FBLN2P98095 1184 aa12.26□□□□□ -0.45
EIF4A1-202ENST00000396527 RAD54L2Q9Y4B4 1467 aa12.26□□□□□ -0.45
EIF4A1-202ENST00000396527 FGD5Q6ZNL6 1462 aa12.24□□□□□ -0.45
EIF4A1-202ENST00000396527 TDRD9Q8NDG6 1382 aaKnown RBP12.24□□□□□ -0.45
EIF4A1-202ENST00000396527 TNIKQ9UKE5 1360 aa12.24□□□□□ -0.45
EIF4A1-202ENST00000396527 CUX1P39880 1505 aa12.23□□□□□ -0.45
EIF4A1-202ENST00000396527 EHMT2Q96KQ7 1210 aa12.23□□□□□ -0.45
EIF4A1-202ENST00000396527 MAPK8IP2Q13387 824 aaPredicted RBP12.22□□□□□ -0.45
EIF4A1-202ENST00000396527 RUSC2Q8N2Y8 1516 aa12.21□□□□□ -0.45
EIF4A1-202ENST00000396527 SYNJ1O43426 1573 aa12.21□□□□□ -0.46
EIF4A1-202ENST00000396527 CHMP7Q8WUX9 453 aaPredicted RBP12.18□□□□□ -0.46
EIF4A1-202ENST00000396527 DMRT2Q9Y5R5 561 aa12.18□□□□□ -0.46
EIF4A1-202ENST00000396527 WDR97A6NE52 1622 aa12.18□□□□□ -0.46
EIF4A1-202ENST00000396527 RIMBP3CA6NJZ7 1639 aa12.15□□□□□ -0.46
EIF4A1-202ENST00000396527 RIMBP3BA6NNM3 1639 aa12.15□□□□□ -0.46
EIF4A1-202ENST00000396527 TOP2BQ02880 1626 aa12.15□□□□□ -0.46
EIF4A1-202ENST00000396527 RIMBP3Q9UFD9 1639 aa12.15□□□□□ -0.46
EIF4A1-202ENST00000396527 GRIN2BQ13224 1484 aa12.15□□□□□ -0.46
EIF4A1-202ENST00000396527 SNAPC4Q5SXM2 1469 aa12.15□□□□□ -0.46
EIF4A1-202ENST00000396527 CHD1O14646 1710 aa12.15□□□□□ -0.46
EIF4A1-202ENST00000396527 ARHGEF11O15085 1522 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms