RNA–Protein interactions for RNA: ENST00000579139.1

EIF4A1-213, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 4

Gene EIF4A1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-213ENST00000579139 NISCHQ9Y2I1 1504 aa28.34■■■□□ 2.13
EIF4A1-213ENST00000579139 CCDC180Q9P1Z9 1646 aa25.02■■□□□ 1.6
EIF4A1-213ENST00000579139 ABCC9O60706 1549 aa24.51■■□□□ 1.51
EIF4A1-213ENST00000579139 ZCCHC6Q5VYS8 1495 aaKnown RBP23.7■■□□□ 1.38
EIF4A1-213ENST00000579139 DNAJC5BQ9UF47 199 aa23.65■■□□□ 1.38
EIF4A1-213ENST00000579139 DCAF8L2P0C7V8 631 aa23.42■■□□□ 1.34
EIF4A1-213ENST00000579139 DCAF1Q9Y4B6 1507 aa23.42■■□□□ 1.34
EIF4A1-213ENST00000579139 NACADO15069 1562 aa23.35■■□□□ 1.33
EIF4A1-213ENST00000579139 MYO15BQ96JP2 1530 aa23.33■■□□□ 1.33
EIF4A1-213ENST00000579139 RB1CC1Q8TDY2 1594 aa23.28■■□□□ 1.32
EIF4A1-213ENST00000579139 UNC13AQ9UPW8 1703 aa23.01■■□□□ 1.27
EIF4A1-213ENST00000579139 SCRIBQ14160 1630 aa22.91■■□□□ 1.26
EIF4A1-213ENST00000579139 PABPN1Q86U42 306 aaKnown RBP eCLIP22.88■■□□□ 1.25
EIF4A1-213ENST00000579139 BICRAQ9NZM4 1560 aa22.72■■□□□ 1.23
EIF4A1-213ENST00000579139 SHROOM4Q9ULL8 1493 aa22.67■■□□□ 1.22
EIF4A1-213ENST00000579139 DNAJC5Q9H3Z4 198 aa22.11■■□□□ 1.13
EIF4A1-213ENST00000579139 CECR2Q9BXF3 1484 aa22.1■■□□□ 1.13
EIF4A1-213ENST00000579139 EIF4G1Q04637 1599 aaKnown RBP21.99■■□□□ 1.11
EIF4A1-213ENST00000579139 CC2D2AQ9P2K1 1620 aa21.98■■□□□ 1.11
EIF4A1-213ENST00000579139 SMARCA4P51532 1647 aa21.94■■□□□ 1.1
EIF4A1-213ENST00000579139 MROH2BQ7Z745 1585 aa21.91■■□□□ 1.1
EIF4A1-213ENST00000579139 BAZ1AQ9NRL2 1556 aaPredicted RBP21.88■■□□□ 1.09
EIF4A1-213ENST00000579139 RSF1Q96T23 1441 aaPredicted RBP21.75■■□□□ 1.07
EIF4A1-213ENST00000579139 WIZO95785 1651 aa21.74■■□□□ 1.07
EIF4A1-213ENST00000579139 PEG3Q9GZU2 1588 aa21.68■■□□□ 1.06
EIF4A1-213ENST00000579139 ATAD2BQ9ULI0 1458 aa21.66■■□□□ 1.06
EIF4A1-213ENST00000579139 SMARCA2P51531 1590 aa21.61■■□□□ 1.05
EIF4A1-213ENST00000579139 NCAPD3P42695 1498 aa21.55■■□□□ 1.04
EIF4A1-213ENST00000579139 HMGXB3Q12766 1538 aa21.5■■□□□ 1.03
EIF4A1-213ENST00000579139 SUPT5HO00267 1087 aaKnown RBP21.48■■□□□ 1.03
EIF4A1-213ENST00000579139 BAZ1BQ9UIG0 1483 aaKnown RBP21.46■■□□□ 1.03
EIF4A1-213ENST00000579139 TOP2AP11388 1531 aaKnown RBP21.42■■□□□ 1.02
EIF4A1-213ENST00000579139 CUX2O14529 1486 aa21.22■□□□□ 0.99
EIF4A1-213ENST00000579139 ERCC6Q03468 1493 aa21.2■□□□□ 0.98
EIF4A1-213ENST00000579139 CCDC88BA6NC98 1476 aa21.2■□□□□ 0.98
EIF4A1-213ENST00000579139 TRIM41Q8WV44 630 aa21.03■□□□□ 0.96
EIF4A1-213ENST00000579139 NESP48681 1621 aa21.02■□□□□ 0.96
EIF4A1-213ENST00000579139 PRDM2Q13029 1718 aa20.93■□□□□ 0.94
EIF4A1-213ENST00000579139 CADPSQ9ULU8 1353 aa20.93■□□□□ 0.94
EIF4A1-213ENST00000579139 LAMC3Q9Y6N6 1575 aa20.93■□□□□ 0.94
EIF4A1-213ENST00000579139 CFTRP13569 1480 aa20.92■□□□□ 0.94
EIF4A1-213ENST00000579139 KIF21AQ7Z4S6 1674 aa20.83■□□□□ 0.93
EIF4A1-213ENST00000579139 FANCD2Q9BXW9 1451 aa20.71■□□□□ 0.91
EIF4A1-213ENST00000579139 PDS5BQ9NTI5 1447 aa20.7■□□□□ 0.9
EIF4A1-213ENST00000579139 CEP164Q9UPV0 1460 aa20.62■□□□□ 0.89
EIF4A1-213ENST00000579139 ABCC8Q09428 1581 aa20.61■□□□□ 0.89
EIF4A1-213ENST00000579139 THOC2Q8NI27 1593 aaKnown RBP20.6■□□□□ 0.89
EIF4A1-213ENST00000579139 URB2Q14146 1524 aaKnown RBP20.55■□□□□ 0.88
EIF4A1-213ENST00000579139 MRC2Q9UBG0 1479 aa20.51■□□□□ 0.87
EIF4A1-213ENST00000579139 CUX1P39880 1505 aa20.51■□□□□ 0.87
EIF4A1-213ENST00000579139 SYNJ1O43426 1573 aa20.5■□□□□ 0.87
EIF4A1-213ENST00000579139 WDR62O43379 1518 aa20.48■□□□□ 0.87
EIF4A1-213ENST00000579139 DNMBPQ6XZF7 1577 aa20.47■□□□□ 0.87
EIF4A1-213ENST00000579139 TOPBP1Q92547 1522 aa20.47■□□□□ 0.87
EIF4A1-213ENST00000579139 BIVM-ERCC5R4GMW8 1640 aa20.45■□□□□ 0.87
EIF4A1-213ENST00000579139 WRNQ14191 1432 aaPredicted RBP eCLIP20.44■□□□□ 0.863e-6■■■■□ 21.9
EIF4A1-213ENST00000579139 TOP2BQ02880 1626 aa20.42■□□□□ 0.86
EIF4A1-213ENST00000579139 OSCARQ8IYS5 282 aa20.37■□□□□ 0.85
EIF4A1-213ENST00000579139 FGD5Q6ZNL6 1462 aa20.33■□□□□ 0.85
EIF4A1-213ENST00000579139 CHIC1Q5VXU3 224 aa20.33■□□□□ 0.85
EIF4A1-213ENST00000579139 POLA1P09884 1462 aaPredicted RBP20.32■□□□□ 0.84
EIF4A1-213ENST00000579139 TARBP1Q13395 1621 aaKnown RBP20.27■□□□□ 0.84
EIF4A1-213ENST00000579139 RAD54L2Q9Y4B4 1467 aa20.26■□□□□ 0.83
EIF4A1-213ENST00000579139 WDR97A6NE52 1622 aa20.25■□□□□ 0.83
EIF4A1-213ENST00000579139 SOGA1O94964 1423 aa20.19■□□□□ 0.82
EIF4A1-213ENST00000579139 IFT140Q96RY7 1462 aa20.16■□□□□ 0.82
EIF4A1-213ENST00000579139 ZNF608Q9ULD9 1512 aaPredicted RBP20.15■□□□□ 0.82
EIF4A1-213ENST00000579139 ABCA10Q8WWZ4 1543 aa20.13■□□□□ 0.81
EIF4A1-213ENST00000579139 ABCA5Q8WWZ7 1642 aa20.09■□□□□ 0.81
EIF4A1-213ENST00000579139 EIF4G3O43432 1585 aaKnown RBP20.08■□□□□ 0.81
EIF4A1-213ENST00000579139 RUSC2Q8N2Y8 1516 aa20.08■□□□□ 0.81
EIF4A1-213ENST00000579139 TDRD9Q8NDG6 1382 aaKnown RBP20.06■□□□□ 0.8
EIF4A1-213ENST00000579139 AQRO60306 1485 aaKnown RBP eCLIP20.05■□□□□ 0.84e-7■■■□□ 18.3
EIF4A1-213ENST00000579139 PBRM1Q86U86 1689 aa20.03■□□□□ 0.8
EIF4A1-213ENST00000579139 TRHP20396 242 aaPredicted RBP20.03■□□□□ 0.8
EIF4A1-213ENST00000579139 CYB5RLQ6IPT4 315 aa20.01■□□□□ 0.79
EIF4A1-213ENST00000579139 RIMBP3CA6NJZ7 1639 aa19.98■□□□□ 0.79
EIF4A1-213ENST00000579139 RIMBP3BA6NNM3 1639 aa19.98■□□□□ 0.79
EIF4A1-213ENST00000579139 RIMBP3Q9UFD9 1639 aa19.98■□□□□ 0.79
EIF4A1-213ENST00000579139 GAPVD1Q14C86 1478 aa19.98■□□□□ 0.79
EIF4A1-213ENST00000579139 KIF27Q86VH2 1401 aa19.93■□□□□ 0.78
EIF4A1-213ENST00000579139 GRIN2BQ13224 1484 aa19.9■□□□□ 0.78
EIF4A1-213ENST00000579139 ARHGEF11O15085 1522 aa19.89■□□□□ 0.77
EIF4A1-213ENST00000579139 ERICH3Q5RHP9 1530 aa19.88■□□□□ 0.77
EIF4A1-213ENST00000579139 IGF1RP08069 1367 aa19.88■□□□□ 0.77
EIF4A1-213ENST00000579139 AEBP2Q6ZN18 517 aaPredicted RBP19.88■□□□□ 0.77
EIF4A1-213ENST00000579139 FAM9AQ8IZU1 332 aaPredicted RBP19.86■□□□□ 0.77
EIF4A1-213ENST00000579139 SNAPC4Q5SXM2 1469 aa19.86■□□□□ 0.77
EIF4A1-213ENST00000579139 ADAMTS12P58397 1594 aa19.83■□□□□ 0.77
EIF4A1-213ENST00000579139 CHD1O14646 1710 aa19.82■□□□□ 0.76
EIF4A1-213ENST00000579139 CUL7Q14999 1698 aa19.81■□□□□ 0.76
EIF4A1-213ENST00000579139 EEA1Q15075 1411 aa19.81■□□□□ 0.76
EIF4A1-213ENST00000579139 MAGI1Q96QZ7 1491 aaPredicted RBP19.79■□□□□ 0.76
EIF4A1-213ENST00000579139 FBLN2P98095 1184 aa19.77■□□□□ 0.76
EIF4A1-213ENST00000579139 CSRNP3Q8WYN3 585 aa19.77■□□□□ 0.76
EIF4A1-213ENST00000579139 PRXQ9BXM0 1461 aa19.74■□□□□ 0.75
EIF4A1-213ENST00000579139 CARMIL1Q5VZK9 1371 aa19.73■□□□□ 0.75
EIF4A1-213ENST00000579139 FHAD1B1AJZ9 1412 aa19.73■□□□□ 0.75
EIF4A1-213ENST00000579139 SYNJ2O15056 1496 aa19.73■□□□□ 0.75
EIF4A1-213ENST00000579139 KIF21BO75037 1637 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms