RNA–Protein interactions for RNA: ENST00000356208.9

RBM38-203, Transcript of RNA binding motif protein 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM38, Length 2,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-203ENST00000356208 NISCHQ9Y2I1 1504 aa48.58■■■■■ 5.37
RBM38-203ENST00000356208 CCDC180Q9P1Z9 1646 aa42.19■■■■■ 4.34
RBM38-203ENST00000356208 ZCCHC6Q5VYS8 1495 aaKnown RBP40.86■■■■■ 4.13
RBM38-203ENST00000356208 DCAF8L2P0C7V8 631 aa40.18■■■■■ 4.02
RBM38-203ENST00000356208 DCAF1Q9Y4B6 1507 aa40.08■■■■■ 4.01
RBM38-203ENST00000356208 SHROOM4Q9ULL8 1493 aa39.97■■■■□ 3.99
RBM38-203ENST00000356208 ABCC9O60706 1549 aa39.83■■■■□ 3.97
RBM38-203ENST00000356208 MYO15BQ96JP2 1530 aa39.48■■■■□ 3.91
RBM38-203ENST00000356208 NACADO15069 1562 aa39.23■■■■□ 3.87
RBM38-203ENST00000356208 SCRIBQ14160 1630 aa38.98■■■■□ 3.83
RBM38-203ENST00000356208 RB1CC1Q8TDY2 1594 aa38.87■■■■□ 3.81
RBM38-203ENST00000356208 SUPT5HO00267 1087 aaKnown RBP38.55■■■■□ 3.76
RBM38-203ENST00000356208 UNC13AQ9UPW8 1703 aa38.22■■■■□ 3.71
RBM38-203ENST00000356208 RSF1Q96T23 1441 aaPredicted RBP37.81■■■■□ 3.64
RBM38-203ENST00000356208 CECR2Q9BXF3 1484 aa37.81■■■■□ 3.64
RBM38-203ENST00000356208 BICRAQ9NZM4 1560 aa37.77■■■■□ 3.64
RBM38-203ENST00000356208 PABPN1Q86U42 306 aaKnown RBP eCLIP37.63■■■■□ 3.61
RBM38-203ENST00000356208 MROH2BQ7Z745 1585 aa37.6■■■■□ 3.61
RBM38-203ENST00000356208 BAZ1AQ9NRL2 1556 aaPredicted RBP37.47■■■■□ 3.59
RBM38-203ENST00000356208 WIZO95785 1651 aa37.34■■■■□ 3.57
RBM38-203ENST00000356208 SMARCA4P51532 1647 aa37.31■■■■□ 3.56
RBM38-203ENST00000356208 CHIC1Q5VXU3 224 aa36.97■■■■□ 3.51
RBM38-203ENST00000356208 TOP2AP11388 1531 aaKnown RBP36.86■■■■□ 3.49
RBM38-203ENST00000356208 PEG3Q9GZU2 1588 aa36.79■■■■□ 3.48
RBM38-203ENST00000356208 ATAD2BQ9ULI0 1458 aa36.62■■■■□ 3.45
RBM38-203ENST00000356208 EIF4G1Q04637 1599 aaKnown RBP36.59■■■■□ 3.45
RBM38-203ENST00000356208 SMARCA2P51531 1590 aa36.57■■■■□ 3.44
RBM38-203ENST00000356208 CCDC88BA6NC98 1476 aa36.53■■■■□ 3.44
RBM38-203ENST00000356208 BAZ1BQ9UIG0 1483 aaKnown RBP36.44■■■■□ 3.42
RBM38-203ENST00000356208 NCAPD3P42695 1498 aa36.22■■■■□ 3.39
RBM38-203ENST00000356208 HMGXB3Q12766 1538 aa36.2■■■■□ 3.39
RBM38-203ENST00000356208 TRIM41Q8WV44 630 aa36.15■■■■□ 3.38
RBM38-203ENST00000356208 CC2D2AQ9P2K1 1620 aa36.01■■■■□ 3.36
RBM38-203ENST00000356208 ABCC8Q09428 1581 aa35.92■■■■□ 3.34
RBM38-203ENST00000356208 LOC105371045A0A1W2PR82 267 aa35.64■■■■□ 3.3
RBM38-203ENST00000356208 FAM9AQ8IZU1 332 aaPredicted RBP35.6■■■■□ 3.29
RBM38-203ENST00000356208 WRNQ14191 1432 aaPredicted RBP eCLIP35.57■■■■□ 3.29
RBM38-203ENST00000356208 CFTRP13569 1480 aa35.52■■■■□ 3.28
RBM38-203ENST00000356208 SYNJ1O43426 1573 aa35.47■■■■□ 3.27
RBM38-203ENST00000356208 PRDM2Q13029 1718 aa35.36■■■■□ 3.25
RBM38-203ENST00000356208 CADPSQ9ULU8 1353 aa35.34■■■■□ 3.25
RBM38-203ENST00000356208 SOGA1O94964 1423 aa35.27■■■■□ 3.24
RBM38-203ENST00000356208 TOP2BQ02880 1626 aa35.25■■■■□ 3.23
RBM38-203ENST00000356208 BIVM-ERCC5R4GMW8 1640 aa35.2■■■■□ 3.23
RBM38-203ENST00000356208 EHMT2Q96KQ7 1210 aa35.17■■■■□ 3.22
RBM38-203ENST00000356208 RUSC2Q8N2Y8 1516 aa35.15■■■■□ 3.22
RBM38-203ENST00000356208 DNAJC5BQ9UF47 199 aa35.15■■■■□ 3.22
RBM38-203ENST00000356208 CUX1P39880 1505 aa35.13■■■■□ 3.21
RBM38-203ENST00000356208 EEA1Q15075 1411 aa35.1■■■■□ 3.21
RBM38-203ENST00000356208 NESP48681 1621 aa35.07■■■■□ 3.2
RBM38-203ENST00000356208 FANCD2Q9BXW9 1451 aa34.98■■■■□ 3.19
RBM38-203ENST00000356208 CSRNP3Q8WYN3 585 aa34.97■■■■□ 3.19
RBM38-203ENST00000356208 LAMC3Q9Y6N6 1575 aa34.97■■■■□ 3.19
RBM38-203ENST00000356208 CEP164Q9UPV0 1460 aa34.72■■■■□ 3.15
RBM38-203ENST00000356208 GOLGA3Q08378 1498 aa34.7■■■■□ 3.15
RBM38-203ENST00000356208 FGD5Q6ZNL6 1462 aa34.7■■■■□ 3.15
RBM38-203ENST00000356208 KIF21BO75037 1637 aa34.7■■■■□ 3.14
RBM38-203ENST00000356208 DNMBPQ6XZF7 1577 aa34.69■■■■□ 3.14
RBM38-203ENST00000356208 PDS5BQ9NTI5 1447 aa34.68■■■■□ 3.14
RBM38-203ENST00000356208 TOPBP1Q92547 1522 aa34.64■■■■□ 3.14
RBM38-203ENST00000356208 KIF21AQ7Z4S6 1674 aa34.62■■■■□ 3.13
RBM38-203ENST00000356208 KIF27Q86VH2 1401 aa34.62■■■■□ 3.13
RBM38-203ENST00000356208 TNIKQ9UKE5 1360 aa34.62■■■■□ 3.13
RBM38-203ENST00000356208 UBTFP17480 764 aaKnown RBP34.59■■■■□ 3.13
RBM38-203ENST00000356208 URB2Q14146 1524 aaKnown RBP34.56■■■■□ 3.12
RBM38-203ENST00000356208 RAPGEF2Q9Y4G8 1499 aa34.53■■■■□ 3.12
RBM38-203ENST00000356208 CUX2O14529 1486 aa34.53■■■■□ 3.12
RBM38-203ENST00000356208 CEP162Q5TB80 1403 aa34.52■■■■□ 3.12
RBM38-203ENST00000356208 POLA1P09884 1462 aaPredicted RBP34.5■■■■□ 3.11
RBM38-203ENST00000356208 PRXQ9BXM0 1461 aa34.47■■■■□ 3.11
RBM38-203ENST00000356208 RAD54L2Q9Y4B4 1467 aa34.43■■■■□ 3.1
RBM38-203ENST00000356208 ERICH3Q5RHP9 1530 aa34.4■■■■□ 3.1
RBM38-203ENST00000356208 ABCA10Q8WWZ4 1543 aa34.35■■■■□ 3.09
RBM38-203ENST00000356208 IGF1RP08069 1367 aa34.31■■■■□ 3.08
RBM38-203ENST00000356208 WDR97A6NE52 1622 aa34.26■■■■□ 3.07
RBM38-203ENST00000356208 PCGF6Q9BYE7 350 aa34.25■■■■□ 3.07
RBM38-203ENST00000356208 MRC2Q9UBG0 1479 aa34.24■■■■□ 3.07
RBM38-203ENST00000356208 CLIP1P30622 1438 aa34.18■■■■□ 3.06
RBM38-203ENST00000356208 CARMIL1Q5VZK9 1371 aa34.14■■■■□ 3.06
RBM38-203ENST00000356208 TARBP1Q13395 1621 aaKnown RBP34.1■■■■□ 3.05
RBM38-203ENST00000356208 TRIM26Q12899 539 aaPredicted RBP34.09■■■■□ 3.05
RBM38-203ENST00000356208 ABCA5Q8WWZ7 1642 aa34.08■■■■□ 3.05
RBM38-203ENST00000356208 ERCC6Q03468 1493 aa34.08■■■■□ 3.05
RBM38-203ENST00000356208 RANGAP1P46060 587 aaPredicted RBP34.07■■■■□ 3.05
RBM38-203ENST00000356208 TDRD9Q8NDG6 1382 aaKnown RBP34.07■■■■□ 3.04
RBM38-203ENST00000356208 WDR62O43379 1518 aa34.06■■■■□ 3.04
RBM38-203ENST00000356208 PPARGC1BQ86YN6 1023 aaKnown RBP34.01■■■■□ 3.03
RBM38-203ENST00000356208 GAPVD1Q14C86 1478 aa34■■■■□ 3.03
RBM38-203ENST00000356208 CUL7Q14999 1698 aa34■■■■□ 3.03
RBM38-203ENST00000356208 THOC2Q8NI27 1593 aaKnown RBP33.94■■■■□ 3.02
RBM38-203ENST00000356208 VPS8Q8N3P4 1428 aa33.9■■■■□ 3.02
RBM38-203ENST00000356208 IFT140Q96RY7 1462 aa33.84■■■■□ 3.01
RBM38-203ENST00000356208 ARAP1Q96P48 1450 aa33.83■■■■□ 3.01
RBM38-203ENST00000356208 PBRM1Q86U86 1689 aa33.82■■■■□ 3
RBM38-203ENST00000356208 AQRO60306 1485 aaKnown RBP eCLIP33.81■■■■□ 32e-9■■■■■ 29.3
RBM38-203ENST00000356208 ARHGAP35Q9NRY4 1499 aa33.78■■■■□ 3
RBM38-203ENST00000356208 ZNF608Q9ULD9 1512 aaPredicted RBP33.76■■■□□ 2.99
RBM38-203ENST00000356208 CTTNBP2Q8WZ74 1663 aa33.71■■■□□ 2.99
RBM38-203ENST00000356208 TTBK1Q5TCY1 1321 aaPredicted RBP33.71■■■□□ 2.99
RBM38-203ENST00000356208 GRIN2BQ13224 1484 aa33.67■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms