RNA–Protein interactions for RNA: ENST00000498201.1

RNF2-204, Transcript of ring finger protein 2, humanhuman

TSL 2

Gene RNF2, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2-204ENST00000498201 NISCHQ9Y2I1 1504 aa41.96■■■■■ 4.31
RNF2-204ENST00000498201 ABCC9O60706 1549 aa37.72■■■■□ 3.63
RNF2-204ENST00000498201 CCDC180Q9P1Z9 1646 aa37.53■■■■□ 3.6
RNF2-204ENST00000498201 RB1CC1Q8TDY2 1594 aa35.84■■■■□ 3.33
RNF2-204ENST00000498201 DCAF8L2P0C7V8 631 aa35.77■■■■□ 3.32
RNF2-204ENST00000498201 NACADO15069 1562 aa35.59■■■■□ 3.29
RNF2-204ENST00000498201 DNAJC5BQ9UF47 199 aa35.49■■■■□ 3.27
RNF2-204ENST00000498201 PABPN1Q86U42 306 aaKnown RBP eCLIP35.25■■■■□ 3.23
RNF2-204ENST00000498201 MYO15BQ96JP2 1530 aa35.06■■■■□ 3.2
RNF2-204ENST00000498201 UNC13AQ9UPW8 1703 aa34.91■■■■□ 3.18
RNF2-204ENST00000498201 BICRAQ9NZM4 1560 aa34.73■■■■□ 3.15
RNF2-204ENST00000498201 ZCCHC6Q5VYS8 1495 aaKnown RBP34.7■■■■□ 3.15
RNF2-204ENST00000498201 DCAF1Q9Y4B6 1507 aa34.6■■■■□ 3.13
RNF2-204ENST00000498201 SCRIBQ14160 1630 aa34.28■■■■□ 3.08
RNF2-204ENST00000498201 SHROOM4Q9ULL8 1493 aa34.25■■■■□ 3.07
RNF2-204ENST00000498201 CC2D2AQ9P2K1 1620 aa34.01■■■■□ 3.03
RNF2-204ENST00000498201 CECR2Q9BXF3 1484 aa33.98■■■■□ 3.03
RNF2-204ENST00000498201 EIF4G1Q04637 1599 aaKnown RBP33.91■■■■□ 3.02
RNF2-204ENST00000498201 NCAPD3P42695 1498 aa32.9■■■□□ 2.86
RNF2-204ENST00000498201 ATAD2BQ9ULI0 1458 aa32.79■■■□□ 2.84
RNF2-204ENST00000498201 SMARCA2P51531 1590 aa32.67■■■□□ 2.82
RNF2-204ENST00000498201 SMARCA4P51532 1647 aa32.67■■■□□ 2.82
RNF2-204ENST00000498201 DNAJC5Q9H3Z4 198 aa32.64■■■□□ 2.82
RNF2-204ENST00000498201 ERCC6Q03468 1493 aa32.61■■■□□ 2.81
RNF2-204ENST00000498201 BAZ1AQ9NRL2 1556 aaPredicted RBP32.56■■■□□ 2.8
RNF2-204ENST00000498201 HMGXB3Q12766 1538 aa32.55■■■□□ 2.8
RNF2-204ENST00000498201 BAZ1BQ9UIG0 1483 aaKnown RBP32.48■■■□□ 2.79
RNF2-204ENST00000498201 CUX2O14529 1486 aa32.46■■■□□ 2.79
RNF2-204ENST00000498201 NESP48681 1621 aa32.37■■■□□ 2.77
RNF2-204ENST00000498201 MROH2BQ7Z745 1585 aa32.33■■■□□ 2.77
RNF2-204ENST00000498201 PEG3Q9GZU2 1588 aa32.32■■■□□ 2.77
RNF2-204ENST00000498201 LAMC3Q9Y6N6 1575 aa32.11■■■□□ 2.73
RNF2-204ENST00000498201 PDS5BQ9NTI5 1447 aa32.04■■■□□ 2.72
RNF2-204ENST00000498201 CADPSQ9ULU8 1353 aa31.96■■■□□ 2.71
RNF2-204ENST00000498201 WIZO95785 1651 aa31.92■■■□□ 2.7
RNF2-204ENST00000498201 THOC2Q8NI27 1593 aaKnown RBP31.9■■■□□ 2.7
RNF2-204ENST00000498201 KIF21AQ7Z4S6 1674 aa31.86■■■□□ 2.69
RNF2-204ENST00000498201 RSF1Q96T23 1441 aaPredicted RBP31.71■■■□□ 2.67
RNF2-204ENST00000498201 MRC2Q9UBG0 1479 aa31.67■■■□□ 2.66
RNF2-204ENST00000498201 CEP164Q9UPV0 1460 aa31.56■■■□□ 2.64
RNF2-204ENST00000498201 FANCD2Q9BXW9 1451 aa31.54■■■□□ 2.64
RNF2-204ENST00000498201 WDR62O43379 1518 aa31.53■■■□□ 2.64
RNF2-204ENST00000498201 CFTRP13569 1480 aa31.52■■■□□ 2.64
RNF2-204ENST00000498201 TOP2AP11388 1531 aaKnown RBP31.49■■■□□ 2.63
RNF2-204ENST00000498201 TRIM41Q8WV44 630 aa31.25■■■□□ 2.59
RNF2-204ENST00000498201 CCDC88BA6NC98 1476 aa31.24■■■□□ 2.59
RNF2-204ENST00000498201 URB2Q14146 1524 aaKnown RBP31.24■■■□□ 2.59
RNF2-204ENST00000498201 OSCARQ8IYS5 282 aa31.21■■■□□ 2.59
RNF2-204ENST00000498201 PRDM2Q13029 1718 aa31.04■■■□□ 2.56
RNF2-204ENST00000498201 IFT140Q96RY7 1462 aa30.95■■■□□ 2.54
RNF2-204ENST00000498201 TOPBP1Q92547 1522 aa30.92■■■□□ 2.54
RNF2-204ENST00000498201 ABCC8Q09428 1581 aa30.92■■■□□ 2.54
RNF2-204ENST00000498201 ZNF608Q9ULD9 1512 aaPredicted RBP30.88■■■□□ 2.53
RNF2-204ENST00000498201 DNMBPQ6XZF7 1577 aa30.76■■■□□ 2.52
RNF2-204ENST00000498201 AQRO60306 1485 aaKnown RBP eCLIP30.67■■■□□ 2.5
RNF2-204ENST00000498201 FBLN2P98095 1184 aa30.64■■■□□ 2.5
RNF2-204ENST00000498201 EIF4G3O43432 1585 aaKnown RBP30.62■■■□□ 2.49
RNF2-204ENST00000498201 POLA1P09884 1462 aaPredicted RBP30.59■■■□□ 2.49
RNF2-204ENST00000498201 TARBP1Q13395 1621 aaKnown RBP30.58■■■□□ 2.49
RNF2-204ENST00000498201 SOGA1O94964 1423 aa30.57■■■□□ 2.48
RNF2-204ENST00000498201 RIMBP3CA6NJZ7 1639 aa30.55■■■□□ 2.48
RNF2-204ENST00000498201 RIMBP3BA6NNM3 1639 aa30.55■■■□□ 2.48
RNF2-204ENST00000498201 RIMBP3Q9UFD9 1639 aa30.55■■■□□ 2.48
RNF2-204ENST00000498201 RAD54L2Q9Y4B4 1467 aa30.54■■■□□ 2.48
RNF2-204ENST00000498201 TDRD9Q8NDG6 1382 aaKnown RBP30.53■■■□□ 2.48
RNF2-204ENST00000498201 SUPT5HO00267 1087 aaKnown RBP30.52■■■□□ 2.48
RNF2-204ENST00000498201 CYB5RLQ6IPT4 315 aa30.49■■■□□ 2.47
RNF2-204ENST00000498201 ARHGEF11O15085 1522 aa30.47■■■□□ 2.47
RNF2-204ENST00000498201 FGD5Q6ZNL6 1462 aa30.41■■■□□ 2.46
RNF2-204ENST00000498201 CHD1O14646 1710 aa30.4■■■□□ 2.46
RNF2-204ENST00000498201 CHMP7Q8WUX9 453 aaPredicted RBP30.38■■■□□ 2.45
RNF2-204ENST00000498201 CUX1P39880 1505 aa30.36■■■□□ 2.45
RNF2-204ENST00000498201 SNAPC4Q5SXM2 1469 aa30.28■■■□□ 2.44
RNF2-204ENST00000498201 WDR97A6NE52 1622 aa30.24■■■□□ 2.43
RNF2-204ENST00000498201 GRIN2BQ13224 1484 aa30.24■■■□□ 2.43
RNF2-204ENST00000498201 MAGI1Q96QZ7 1491 aaPredicted RBP30.2■■■□□ 2.43
RNF2-204ENST00000498201 TRHP20396 242 aaPredicted RBP30.19■■■□□ 2.42
RNF2-204ENST00000498201 ARAP1Q96P48 1450 aa30.17■■■□□ 2.42
RNF2-204ENST00000498201 GAPVD1Q14C86 1478 aa30.15■■■□□ 2.42
RNF2-204ENST00000498201 SYNJ2O15056 1496 aa30.12■■■□□ 2.41
RNF2-204ENST00000498201 SYNJ1O43426 1573 aa30.1■■■□□ 2.41
RNF2-204ENST00000498201 ABCA10Q8WWZ4 1543 aa30.06■■■□□ 2.4
RNF2-204ENST00000498201 CLASP1Q7Z460 1538 aa30.05■■■□□ 2.4
RNF2-204ENST00000498201 WRNQ14191 1432 aaPredicted RBP eCLIP30.03■■■□□ 2.4
RNF2-204ENST00000498201 PBRM1Q86U86 1689 aa29.98■■■□□ 2.39
RNF2-204ENST00000498201 ABCA5Q8WWZ7 1642 aa29.92■■■□□ 2.38
RNF2-204ENST00000498201 TOP2BQ02880 1626 aa29.85■■■□□ 2.37
RNF2-204ENST00000498201 GRIN2AQ12879 1464 aa29.81■■■□□ 2.36
RNF2-204ENST00000498201 BIVM-ERCC5R4GMW8 1640 aa29.81■■■□□ 2.36
RNF2-204ENST00000498201 FHAD1B1AJZ9 1412 aa29.77■■■□□ 2.36
RNF2-204ENST00000498201 ADAMTS12P58397 1594 aa29.7■■■□□ 2.35
RNF2-204ENST00000498201 NUP160Q12769 1436 aa29.7■■■□□ 2.34
RNF2-204ENST00000498201 ERICH3Q5RHP9 1530 aa29.67■■■□□ 2.34
RNF2-204ENST00000498201 CEP170Q5SW79 1584 aa29.64■■■□□ 2.34
RNF2-204ENST00000498201 ERCC6L2Q5T890 1561 aa29.62■■■□□ 2.33
RNF2-204ENST00000498201 JPH4Q96JJ6 628 aa29.61■■■□□ 2.33
RNF2-204ENST00000498201 PRG4Q92954 1404 aaPredicted RBP29.51■■■□□ 2.31
RNF2-204ENST00000498201 SHROOM2Q13796 1616 aa29.49■■■□□ 2.31
RNF2-204ENST00000498201 IGF1RP08069 1367 aa29.42■■■□□ 2.3
RNF2-204ENST00000498201 KIF27Q86VH2 1401 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms