RNA–Protein interactions for RNA: ENST00000582848.5

EIF4A1-226, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 3

Gene EIF4A1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-226ENST00000582848 NISCHQ9Y2I1 1504 aa29.13■■■□□ 2.25
EIF4A1-226ENST00000582848 ABCC9O60706 1549 aa26.66■■□□□ 1.86
EIF4A1-226ENST00000582848 CCDC180Q9P1Z9 1646 aa26.36■■□□□ 1.81
EIF4A1-226ENST00000582848 RB1CC1Q8TDY2 1594 aa25.29■■□□□ 1.64
EIF4A1-226ENST00000582848 DNAJC5BQ9UF47 199 aa25.25■■□□□ 1.63
EIF4A1-226ENST00000582848 NACADO15069 1562 aa25.03■■□□□ 1.6
EIF4A1-226ENST00000582848 PABPN1Q86U42 306 aaKnown RBP eCLIP24.71■■□□□ 1.55
EIF4A1-226ENST00000582848 DCAF8L2P0C7V8 631 aa24.68■■□□□ 1.54
EIF4A1-226ENST00000582848 MYO15BQ96JP2 1530 aa24.59■■□□□ 1.53
EIF4A1-226ENST00000582848 UNC13AQ9UPW8 1703 aa24.58■■□□□ 1.53
EIF4A1-226ENST00000582848 BICRAQ9NZM4 1560 aa24.47■■□□□ 1.51
EIF4A1-226ENST00000582848 SHROOM4Q9ULL8 1493 aa24.3■■□□□ 1.48
EIF4A1-226ENST00000582848 CECR2Q9BXF3 1484 aa24.11■■□□□ 1.45
EIF4A1-226ENST00000582848 DCAF1Q9Y4B6 1507 aa24.1■■□□□ 1.45
EIF4A1-226ENST00000582848 ZCCHC6Q5VYS8 1495 aaKnown RBP24.08■■□□□ 1.45
EIF4A1-226ENST00000582848 CC2D2AQ9P2K1 1620 aa24.08■■□□□ 1.45
EIF4A1-226ENST00000582848 EIF4G1Q04637 1599 aaKnown RBP23.96■■□□□ 1.43
EIF4A1-226ENST00000582848 SCRIBQ14160 1630 aa23.93■■□□□ 1.42
EIF4A1-226ENST00000582848 DNAJC5Q9H3Z4 198 aa23.59■■□□□ 1.37
EIF4A1-226ENST00000582848 CUX2O14529 1486 aa23.24■■□□□ 1.31
EIF4A1-226ENST00000582848 ERCC6Q03468 1493 aa23.13■■□□□ 1.29
EIF4A1-226ENST00000582848 NCAPD3P42695 1498 aa23.08■■□□□ 1.29
EIF4A1-226ENST00000582848 ATAD2BQ9ULI0 1458 aa22.93■■□□□ 1.26
EIF4A1-226ENST00000582848 HMGXB3Q12766 1538 aa22.91■■□□□ 1.26
EIF4A1-226ENST00000582848 SMARCA2P51531 1590 aa22.9■■□□□ 1.26
EIF4A1-226ENST00000582848 SMARCA4P51532 1647 aa22.81■■□□□ 1.24
EIF4A1-226ENST00000582848 NESP48681 1621 aa22.75■■□□□ 1.23
EIF4A1-226ENST00000582848 BAZ1BQ9UIG0 1483 aaKnown RBP22.73■■□□□ 1.23
EIF4A1-226ENST00000582848 BAZ1AQ9NRL2 1556 aaPredicted RBP22.68■■□□□ 1.22
EIF4A1-226ENST00000582848 THOC2Q8NI27 1593 aaKnown RBP22.67■■□□□ 1.22
EIF4A1-226ENST00000582848 LAMC3Q9Y6N6 1575 aa22.65■■□□□ 1.22
EIF4A1-226ENST00000582848 PEG3Q9GZU2 1588 aa22.63■■□□□ 1.21
EIF4A1-226ENST00000582848 PDS5BQ9NTI5 1447 aa22.55■■□□□ 1.2
EIF4A1-226ENST00000582848 KIF21AQ7Z4S6 1674 aa22.47■■□□□ 1.19
EIF4A1-226ENST00000582848 MROH2BQ7Z745 1585 aa22.39■■□□□ 1.18
EIF4A1-226ENST00000582848 TRIM41Q8WV44 630 aa22.36■■□□□ 1.17
EIF4A1-226ENST00000582848 MRC2Q9UBG0 1479 aa22.35■■□□□ 1.17
EIF4A1-226ENST00000582848 CADPSQ9ULU8 1353 aa22.35■■□□□ 1.17
EIF4A1-226ENST00000582848 WDR62O43379 1518 aa22.31■■□□□ 1.16
EIF4A1-226ENST00000582848 CEP164Q9UPV0 1460 aa22.19■■□□□ 1.14
EIF4A1-226ENST00000582848 FANCD2Q9BXW9 1451 aa22.1■■□□□ 1.13
EIF4A1-226ENST00000582848 WIZO95785 1651 aa22.08■■□□□ 1.13
EIF4A1-226ENST00000582848 OSCARQ8IYS5 282 aa22.06■■□□□ 1.12
EIF4A1-226ENST00000582848 CFTRP13569 1480 aa22.03■■□□□ 1.12
EIF4A1-226ENST00000582848 URB2Q14146 1524 aaKnown RBP21.9■■□□□ 1.1
EIF4A1-226ENST00000582848 TOP2AP11388 1531 aaKnown RBP21.87■■□□□ 1.09
EIF4A1-226ENST00000582848 RSF1Q96T23 1441 aaPredicted RBP21.8■■□□□ 1.08
EIF4A1-226ENST00000582848 RIMBP3CA6NJZ7 1639 aa21.79■■□□□ 1.08
EIF4A1-226ENST00000582848 RIMBP3BA6NNM3 1639 aa21.79■■□□□ 1.08
EIF4A1-226ENST00000582848 RIMBP3Q9UFD9 1639 aa21.79■■□□□ 1.08
EIF4A1-226ENST00000582848 IFT140Q96RY7 1462 aa21.77■■□□□ 1.07
EIF4A1-226ENST00000582848 PRDM2Q13029 1718 aa21.75■■□□□ 1.07
EIF4A1-226ENST00000582848 ARHGEF11O15085 1522 aa21.71■■□□□ 1.07
EIF4A1-226ENST00000582848 ZNF608Q9ULD9 1512 aaPredicted RBP21.68■■□□□ 1.06
EIF4A1-226ENST00000582848 ABCC8Q09428 1581 aa21.63■■□□□ 1.05
EIF4A1-226ENST00000582848 TOPBP1Q92547 1522 aa21.62■■□□□ 1.05
EIF4A1-226ENST00000582848 EIF4G3O43432 1585 aaKnown RBP21.6■■□□□ 1.05
EIF4A1-226ENST00000582848 CCDC88BA6NC98 1476 aa21.57■■□□□ 1.04
EIF4A1-226ENST00000582848 DNMBPQ6XZF7 1577 aa21.53■■□□□ 1.04
EIF4A1-226ENST00000582848 CYB5RLQ6IPT4 315 aa21.52■■□□□ 1.04
EIF4A1-226ENST00000582848 CHD1O14646 1710 aa21.46■■□□□ 1.03
EIF4A1-226ENST00000582848 ARAP1Q96P48 1450 aa21.45■■□□□ 1.03
EIF4A1-226ENST00000582848 TARBP1Q13395 1621 aaKnown RBP21.44■■□□□ 1.02
EIF4A1-226ENST00000582848 TRHP20396 242 aaPredicted RBP21.44■■□□□ 1.02
EIF4A1-226ENST00000582848 AQRO60306 1485 aaKnown RBP eCLIP21.43■■□□□ 1.023e-7■■■■□ 20.7
EIF4A1-226ENST00000582848 FBLN2P98095 1184 aa21.39■■□□□ 1.01
EIF4A1-226ENST00000582848 POLA1P09884 1462 aaPredicted RBP21.38■■□□□ 1.01
EIF4A1-226ENST00000582848 WDR97A6NE52 1622 aa21.33■■□□□ 1
EIF4A1-226ENST00000582848 SOGA1O94964 1423 aa21.27■■□□□ 1
EIF4A1-226ENST00000582848 SNAPC4Q5SXM2 1469 aa21.26■□□□□ 0.99
EIF4A1-226ENST00000582848 RAD54L2Q9Y4B4 1467 aa21.26■□□□□ 0.99
EIF4A1-226ENST00000582848 CLASP1Q7Z460 1538 aa21.25■□□□□ 0.99
EIF4A1-226ENST00000582848 SYNJ1O43426 1573 aa21.25■□□□□ 0.99
EIF4A1-226ENST00000582848 TDRD9Q8NDG6 1382 aaKnown RBP21.24■□□□□ 0.99
EIF4A1-226ENST00000582848 MAGI1Q96QZ7 1491 aaPredicted RBP21.24■□□□□ 0.99
EIF4A1-226ENST00000582848 CHMP7Q8WUX9 453 aaPredicted RBP21.2■□□□□ 0.98
EIF4A1-226ENST00000582848 FGD5Q6ZNL6 1462 aa21.19■□□□□ 0.98
EIF4A1-226ENST00000582848 GRIN2BQ13224 1484 aa21.17■□□□□ 0.98
EIF4A1-226ENST00000582848 SYNJ2O15056 1496 aa21.15■□□□□ 0.98
EIF4A1-226ENST00000582848 AEBP2Q6ZN18 517 aaPredicted RBP21.15■□□□□ 0.98
EIF4A1-226ENST00000582848 CUX1P39880 1505 aa21.08■□□□□ 0.96
EIF4A1-226ENST00000582848 GAPVD1Q14C86 1478 aa21.06■□□□□ 0.96
EIF4A1-226ENST00000582848 PBRM1Q86U86 1689 aa21.01■□□□□ 0.95
EIF4A1-226ENST00000582848 ABCA10Q8WWZ4 1543 aa20.95■□□□□ 0.94
EIF4A1-226ENST00000582848 ABCA5Q8WWZ7 1642 aa20.94■□□□□ 0.94
EIF4A1-226ENST00000582848 GRIN2AQ12879 1464 aa20.89■□□□□ 0.94
EIF4A1-226ENST00000582848 NUP160Q12769 1436 aa20.84■□□□□ 0.93
EIF4A1-226ENST00000582848 ADAMTS12P58397 1594 aa20.83■□□□□ 0.92
EIF4A1-226ENST00000582848 CEP170Q5SW79 1584 aa20.81■□□□□ 0.92
EIF4A1-226ENST00000582848 ERCC6L2Q5T890 1561 aa20.81■□□□□ 0.92
EIF4A1-226ENST00000582848 WRNQ14191 1432 aaPredicted RBP eCLIP20.81■□□□□ 0.923e-6■■■■□ 21.9
EIF4A1-226ENST00000582848 SHROOM2Q13796 1616 aa20.77■□□□□ 0.92
EIF4A1-226ENST00000582848 FHAD1B1AJZ9 1412 aa20.77■□□□□ 0.91
EIF4A1-226ENST00000582848 ERICH3Q5RHP9 1530 aa20.7■□□□□ 0.9
EIF4A1-226ENST00000582848 TOP2BQ02880 1626 aa20.67■□□□□ 0.9
EIF4A1-226ENST00000582848 BIVM-ERCC5R4GMW8 1640 aa20.67■□□□□ 0.9
EIF4A1-226ENST00000582848 KIF13AQ9H1H9 1805 aa20.65■□□□□ 0.9
EIF4A1-226ENST00000582848 PRG4Q92954 1404 aaPredicted RBP20.64■□□□□ 0.89
EIF4A1-226ENST00000582848 ABCC10Q5T3U5 1492 aa20.58■□□□□ 0.89
EIF4A1-226ENST00000582848 JPH4Q96JJ6 628 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms