Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC15.1■□□□□ 0.011e-20■■■■■ 1008.8
DDX52Q9Y2R4 SMC4-221ENST00000489573 1553 ntTSL 1 (best)25.52■■□□□ 1.682e-144■■■■■ 553.7
DDX52Q9Y2R4 SMC4-209ENST00000468653 1756 ntTSL 222.26■■□□□ 1.152e-144■■■■■ 553.7
DDX52Q9Y2R4 SMC4-211ENST00000469858 1971 ntTSL 221.26■□□□□ 0.992e-144■■■■■ 553.7
DDX52Q9Y2R4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.562e-144■■■■■ 553.7
DDX52Q9Y2R4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.38■□□□□ 0.212e-144■■■■■ 553.7
DDX52Q9Y2R4 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.332e-144■■■■■ 553.7
DDX52Q9Y2R4 SMC4-210ENST00000469762 3998 ntTSL 2 BASIC11.58□□□□□ -0.562e-144■■■■■ 553.7
DDX52Q9Y2R4 SMC4-213ENST00000472282 667 ntTSL 310.78□□□□□ -0.682e-144■■■■■ 553.7
DDX52Q9Y2R4 SMC4-214ENST00000472991 582 ntTSL 510.78□□□□□ -0.682e-144■■■■■ 553.7
DDX52Q9Y2R4 SMC4-212ENST00000470240 724 ntTSL 39.08□□□□□ -0.962e-144■■■■■ 553.7
DDX52Q9Y2R4 SMC4-208ENST00000467468 566 ntTSL 44.37□□□□□ -1.712e-144■■■■■ 553.7
DDX52Q9Y2R4 SMC4-219ENST00000487747 637 ntTSL 54.05□□□□□ -1.762e-144■■■■■ 553.7
DDX52Q9Y2R4 SMC4-227ENST00000497984 563 ntTSL 53.64□□□□□ -1.832e-144■■■■■ 553.7
DDX52Q9Y2R4 MIR15B-201ENST00000385045 98 ntBASIC1.37□□□□□ -2.192e-144■■■■■ 553.7
DDX52Q9Y2R4 THEM7P-201ENST00000419556 672 ntBASIC7.68□□□□□ -1.185e-65■■■■■ 246.6
DDX52Q9Y2R4 TNKS-201ENST00000310430 9620 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.78e-9■■■■■ 174.8
DDX52Q9Y2R4 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.21□□□□□ -1.268e-9■■■■■ 174.8
DDX52Q9Y2R4 TNKS-203ENST00000517770 574 ntTSL 46.54□□□□□ -1.368e-9■■■■■ 174.8
DDX52Q9Y2R4 SGPL1-204ENST00000486993 537 ntTSL 1 (best)24.46■■□□□ 1.518e-29■■■■■ 170.2
DDX52Q9Y2R4 SGPL1-202ENST00000373202 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.58e-29■■■■■ 170.2
DDX52Q9Y2R4 SNORD3B-1-201ENST00000577988 758 ntBASIC16.49■□□□□ 0.232e-34■■■■■ 157.7
DDX52Q9Y2R4 SNORD3B-1-203ENST00000631292 217 nt13.32□□□□□ -0.282e-34■■■■■ 157.7
DDX52Q9Y2R4 SNORD3B-1-202ENST00000617128 218 nt12.99□□□□□ -0.332e-34■■■■■ 157.7
DDX52Q9Y2R4 MT-TY-201ENST00000387409 66 ntBASIC0□□□□□ -2.411e-323■■■■■ 148.9
DDX52Q9Y2R4 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC12.58□□□□□ -0.46e-8■■■■■ 133.9
DDX52Q9Y2R4 HOXC10-205ENST00000515593 526 ntTSL 49.29□□□□□ -0.921e-11■■■■■ 106.3
DDX52Q9Y2R4 RILPL1-201ENST00000340724 2389 ntTSL 516.36■□□□□ 0.218e-8■■■■■ 105.4
DDX52Q9Y2R4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.99■■□□□ 1.751e-7■■■■■ 103.4
DDX52Q9Y2R4 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.171e-7■■■■■ 103.4
DDX52Q9Y2R4 MT-TG-201ENST00000387429 68 ntBASIC1.33□□□□□ -2.21e-323■■■■■ 91.6
DDX52Q9Y2R4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.077e-7■■■■■ 85
DDX52Q9Y2R4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.94■□□□□ 0.947e-7■■■■■ 85
DDX52Q9Y2R4 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC16.28■□□□□ 0.27e-7■■■■■ 85
DDX52Q9Y2R4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.481e-7■■■■■ 84.2
DDX52Q9Y2R4 ANKRD30BL-204ENST00000470729 1425 ntTSL 1 (best)20.36■□□□□ 0.852e-24■■■■■ 73.9
DDX52Q9Y2R4 RNA5SP444-201ENST00000516844 106 ntBASIC12.27□□□□□ -0.451e-23■■■■■ 70.9
DDX52Q9Y2R4 CEP72-203ENST00000512038 656 ntTSL 220.03■□□□□ 0.86e-7■■■■■ 65.1
DDX52Q9Y2R4 FZR1-207ENST00000591290 1331 ntTSL 523.46■■□□□ 1.355e-9■■■■■ 64.9
DDX52Q9Y2R4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.995e-9■■■■■ 64.9
DDX52Q9Y2R4 FZR1-208ENST00000592214 598 ntTSL 318.9■□□□□ 0.625e-9■■■■■ 64.9
DDX52Q9Y2R4 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.62■□□□□ 0.415e-9■■■■■ 64.9
DDX52Q9Y2R4 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC15.1■□□□□ 0.013e-34■■■■■ 64.7
DDX52Q9Y2R4 NFE2L2-205ENST00000430047 451 ntTSL 327.87■■■□□ 2.052e-7■■■■■ 63.7
DDX52Q9Y2R4 NFE2L2-210ENST00000462023 521 ntTSL 218.55■□□□□ 0.562e-7■■■■■ 63.7
DDX52Q9Y2R4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.4■□□□□ 0.222e-7■■■■■ 63.7
DDX52Q9Y2R4 NFE2L2-211ENST00000464747 2749 ntTSL 2 BASIC12.82□□□□□ -0.362e-7■■■■■ 63.7
DDX52Q9Y2R4 NFE2L2-214ENST00000588123 814 ntTSL 511.21□□□□□ -0.612e-7■■■■■ 63.7
DDX52Q9Y2R4 NFE2L2-213ENST00000586532 942 ntTSL 54.56□□□□□ -1.682e-7■■■■■ 63.7
DDX52Q9Y2R4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.627e-7■■■■■ 62
DDX52Q9Y2R4 PNPLA7-203ENST00000434090 2419 ntTSL 515.35■□□□□ 0.054e-7■■■■■ 61.5
DDX52Q9Y2R4 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.264e-7■■■■■ 61.5
DDX52Q9Y2R4 PNPLA7-201ENST00000277531 4581 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.334e-7■■■■■ 61.5
DDX52Q9Y2R4 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC13.59□□□□□ -0.231e-6■■■■■ 57.8
DDX52Q9Y2R4 AL669831.3-207ENST00000635509 941 ntTSL 510.51□□□□□ -0.731e-6■■■■■ 57.8
DDX52Q9Y2R4 SRP14-AS1-201ENST00000504245 2317 ntTSL 2 BASIC12.87□□□□□ -0.352e-6■■■■■ 57.6
DDX52Q9Y2R4 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC8.02□□□□□ -1.132e-6■■■■■ 57.6
DDX52Q9Y2R4 MGAT4B-212ENST00000520134 592 ntTSL 326.23■■□□□ 1.791e-9■■■■■ 55.9
DDX52Q9Y2R4 MGAT4B-221ENST00000523108 1080 ntTSL 526.23■■□□□ 1.791e-9■■■■■ 55.9
DDX52Q9Y2R4 MGAT4B-211ENST00000520019 831 ntTSL 326.23■■□□□ 1.791e-9■■■■■ 55.9
DDX52Q9Y2R4 MGAT4B-208ENST00000519616 522 ntTSL 525.34■■□□□ 1.651e-9■■■■■ 55.9
DDX52Q9Y2R4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.381e-9■■■■■ 55.9
DDX52Q9Y2R4 INSIG2-203ENST00000467223 627 ntTSL 522.89■■□□□ 1.251e-9■■■■■ 55.9
DDX52Q9Y2R4 MGAT4B-203ENST00000518168 1013 ntTSL 222.48■■□□□ 1.191e-9■■■■■ 55.9
DDX52Q9Y2R4 MGAT4B-222ENST00000523329 543 ntTSL 320.24■□□□□ 0.831e-9■■■■■ 55.9
DDX52Q9Y2R4 INSIG2-202ENST00000411929 574 ntTSL 218.52■□□□□ 0.561e-9■■■■■ 55.9
DDX52Q9Y2R4 MGAT4B-210ENST00000519965 524 ntTSL 315.38■□□□□ 0.051e-9■■■■■ 55.9
DDX52Q9Y2R4 INSIG2-206ENST00000485520 3185 ntTSL 512.82□□□□□ -0.361e-9■■■■■ 55.9
DDX52Q9Y2R4 INSIG2-204ENST00000471186 2100 ntTSL 510.01□□□□□ -0.811e-9■■■■■ 55.9
DDX52Q9Y2R4 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.851e-9■■■■■ 55.9
DDX52Q9Y2R4 TSPEAR-AS2-203ENST00000465978 345 ntTSL 514.59□□□□□ -0.072e-6■■■■■ 55.3
DDX52Q9Y2R4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.288e-7■■■■■ 54.3
DDX52Q9Y2R4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC29.11■■■□□ 2.258e-7■■■■■ 54.3
DDX52Q9Y2R4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.01■□□□□ 0.958e-7■■■■■ 54.3
DDX52Q9Y2R4 PXMP2-202ENST00000428960 762 ntTSL 319.81■□□□□ 0.768e-7■■■■■ 54.3
DDX52Q9Y2R4 PXMP2-204ENST00000539093 516 ntTSL 318.36■□□□□ 0.538e-7■■■■■ 54.3
DDX52Q9Y2R4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.581e-8■■■■■ 53.3
DDX52Q9Y2R4 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.68□□□□□ -1.661e-323■■■■■ 52.4
DDX52Q9Y2R4 ZYX-207ENST00000457235 703 ntTSL 430.38■■■□□ 2.452e-8■■■■■ 49.3
DDX52Q9Y2R4 ZYX-208ENST00000468083 1146 ntTSL 525.93■■□□□ 1.742e-8■■■■■ 49.3
DDX52Q9Y2R4 ZYX-206ENST00000449630 533 ntTSL 421.97■■□□□ 1.112e-8■■■■■ 49.3
DDX52Q9Y2R4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24.62■■□□□ 1.533e-6■■■■■ 49
DDX52Q9Y2R4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC23.57■■□□□ 1.363e-6■■■■■ 49
DDX52Q9Y2R4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC22.97■■□□□ 1.273e-6■■■■■ 49
DDX52Q9Y2R4 ST3GAL3-225ENST00000489897 998 ntTSL 522.87■■□□□ 1.253e-6■■■■■ 49
DDX52Q9Y2R4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC22.68■■□□□ 1.223e-6■■■■■ 49
DDX52Q9Y2R4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC22.34■■□□□ 1.173e-6■■■■■ 49
DDX52Q9Y2R4 ST3GAL3-230ENST00000530154 1670 ntTSL 221.7■■□□□ 1.063e-6■■■■■ 49
DDX52Q9Y2R4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.18■□□□□ 0.983e-6■■■■■ 49
DDX52Q9Y2R4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.82■□□□□ 0.923e-6■■■■■ 49
DDX52Q9Y2R4 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.47■□□□□ 0.393e-6■■■■■ 49
DDX52Q9Y2R4 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.33e-6■■■■■ 49
DDX52Q9Y2R4 ST3GAL3-202ENST00000330208 1479 ntTSL 5 BASIC15.4■□□□□ 0.063e-6■■■■■ 49
DDX52Q9Y2R4 ST3GAL3-210ENST00000361746 1335 ntTSL 1 (best) BASIC12.64□□□□□ -0.393e-6■■■■■ 49
DDX52Q9Y2R4 ST3GAL3-217ENST00000372369 1038 ntTSL 1 (best) BASIC12.49□□□□□ -0.413e-6■■■■■ 49
DDX52Q9Y2R4 ST3GAL3-229ENST00000528371 599 ntTSL 1 (best) BASIC12.13□□□□□ -0.473e-6■■■■■ 49
DDX52Q9Y2R4 ST3GAL3-215ENST00000372367 644 ntTSL 1 (best) BASIC12.13□□□□□ -0.473e-6■■■■■ 49
DDX52Q9Y2R4 ST3GAL3-231ENST00000530581 893 ntTSL 1 (best)11.67□□□□□ -0.543e-6■■■■■ 49
DDX52Q9Y2R4 ST3GAL3-203ENST00000332628 1035 ntTSL 1 (best) BASIC11.62□□□□□ -0.553e-6■■■■■ 49
DDX52Q9Y2R4 ST3GAL3-216ENST00000372368 1290 ntTSL 1 (best) BASIC11.43□□□□□ -0.583e-6■■■■■ 49
Retrieved 100 of 4,483 protein–RNA pairs in 37.9 ms