RNA–Protein interactions for RNA: ENST00000570954.1

RPH3AL-206, Transcript of rabphilin 3A like (without C2 domains), humanhuman

TSL 4

Gene RPH3AL, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-206ENST00000570954 NISCHQ9Y2I1 1504 aa28.93■■■□□ 2.22
RPH3AL-206ENST00000570954 CCDC180Q9P1Z9 1646 aa25.55■■□□□ 1.68
RPH3AL-206ENST00000570954 ABCC9O60706 1549 aa24.61■■□□□ 1.53
RPH3AL-206ENST00000570954 ZCCHC6Q5VYS8 1495 aaKnown RBP24.16■■□□□ 1.46
RPH3AL-206ENST00000570954 DCAF8L2P0C7V8 631 aa24.07■■□□□ 1.44
RPH3AL-206ENST00000570954 MYO15BQ96JP2 1530 aa24.01■■□□□ 1.43
RPH3AL-206ENST00000570954 DCAF1Q9Y4B6 1507 aa24.01■■□□□ 1.43
RPH3AL-206ENST00000570954 NACADO15069 1562 aa23.99■■□□□ 1.43
RPH3AL-206ENST00000570954 RB1CC1Q8TDY2 1594 aa23.92■■□□□ 1.42
RPH3AL-206ENST00000570954 SCRIBQ14160 1630 aa23.27■■□□□ 1.32
RPH3AL-206ENST00000570954 UNC13AQ9UPW8 1703 aa23.19■■□□□ 1.3
RPH3AL-206ENST00000570954 PABPN1Q86U42 306 aaKnown RBP eCLIP23.07■■□□□ 1.28
RPH3AL-206ENST00000570954 BICRAQ9NZM4 1560 aa23.06■■□□□ 1.28
RPH3AL-206ENST00000570954 SHROOM4Q9ULL8 1493 aa23.05■■□□□ 1.28
RPH3AL-206ENST00000570954 EIF4G1Q04637 1599 aaKnown RBP22.48■■□□□ 1.19
RPH3AL-206ENST00000570954 BAZ1AQ9NRL2 1556 aaPredicted RBP22.43■■□□□ 1.18
RPH3AL-206ENST00000570954 CECR2Q9BXF3 1484 aa22.42■■□□□ 1.18
RPH3AL-206ENST00000570954 SMARCA4P51532 1647 aa22.33■■□□□ 1.17
RPH3AL-206ENST00000570954 CC2D2AQ9P2K1 1620 aa22.28■■□□□ 1.16
RPH3AL-206ENST00000570954 MROH2BQ7Z745 1585 aa22.24■■□□□ 1.15
RPH3AL-206ENST00000570954 DNAJC5BQ9UF47 199 aa22.21■■□□□ 1.15
RPH3AL-206ENST00000570954 SMARCA2P51531 1590 aa22.21■■□□□ 1.15
RPH3AL-206ENST00000570954 ATAD2BQ9ULI0 1458 aa22.16■■□□□ 1.14
RPH3AL-206ENST00000570954 RSF1Q96T23 1441 aaPredicted RBP22.16■■□□□ 1.14
RPH3AL-206ENST00000570954 PEG3Q9GZU2 1588 aa22.16■■□□□ 1.14
RPH3AL-206ENST00000570954 NCAPD3P42695 1498 aa22.14■■□□□ 1.13
RPH3AL-206ENST00000570954 HMGXB3Q12766 1538 aa22.05■■□□□ 1.12
RPH3AL-206ENST00000570954 BAZ1BQ9UIG0 1483 aaKnown RBP22.03■■□□□ 1.12
RPH3AL-206ENST00000570954 WIZO95785 1651 aa21.98■■□□□ 1.11
RPH3AL-206ENST00000570954 SUPT5HO00267 1087 aaKnown RBP21.9■■□□□ 1.1
RPH3AL-206ENST00000570954 TOP2AP11388 1531 aaKnown RBP21.86■■□□□ 1.09
RPH3AL-206ENST00000570954 CCDC88BA6NC98 1476 aa21.58■■□□□ 1.05
RPH3AL-206ENST00000570954 CADPSQ9ULU8 1353 aa21.52■■□□□ 1.04
RPH3AL-206ENST00000570954 LAMC3Q9Y6N6 1575 aa21.48■■□□□ 1.03
RPH3AL-206ENST00000570954 CFTRP13569 1480 aa21.44■■□□□ 1.02
RPH3AL-206ENST00000570954 PDS5BQ9NTI5 1447 aa21.38■■□□□ 1.01
RPH3AL-206ENST00000570954 NESP48681 1621 aa21.36■■□□□ 1.01
RPH3AL-206ENST00000570954 ERCC6Q03468 1493 aa21.28■■□□□ 1
RPH3AL-206ENST00000570954 FANCD2Q9BXW9 1451 aa21.24■□□□□ 0.99
RPH3AL-206ENST00000570954 PRDM2Q13029 1718 aa21.23■□□□□ 0.99
RPH3AL-206ENST00000570954 CEP164Q9UPV0 1460 aa21.2■□□□□ 0.98
RPH3AL-206ENST00000570954 KIF21AQ7Z4S6 1674 aa21.1■□□□□ 0.97
RPH3AL-206ENST00000570954 MRC2Q9UBG0 1479 aa21.08■□□□□ 0.97
RPH3AL-206ENST00000570954 ABCC8Q09428 1581 aa21.06■□□□□ 0.96
RPH3AL-206ENST00000570954 THOC2Q8NI27 1593 aaKnown RBP20.97■□□□□ 0.95
RPH3AL-206ENST00000570954 WDR62O43379 1518 aa20.97■□□□□ 0.95
RPH3AL-206ENST00000570954 CUX2O14529 1486 aa20.94■□□□□ 0.94
RPH3AL-206ENST00000570954 WRNQ14191 1432 aaPredicted RBP eCLIP20.94■□□□□ 0.94
RPH3AL-206ENST00000570954 URB2Q14146 1524 aaKnown RBP20.94■□□□□ 0.94
RPH3AL-206ENST00000570954 DNMBPQ6XZF7 1577 aa20.93■□□□□ 0.94
RPH3AL-206ENST00000570954 TOPBP1Q92547 1522 aa20.92■□□□□ 0.94
RPH3AL-206ENST00000570954 CUX1P39880 1505 aa20.84■□□□□ 0.93
RPH3AL-206ENST00000570954 TOP2BQ02880 1626 aa20.81■□□□□ 0.92
RPH3AL-206ENST00000570954 BIVM-ERCC5R4GMW8 1640 aa20.78■□□□□ 0.92
RPH3AL-206ENST00000570954 IFT140Q96RY7 1462 aa20.76■□□□□ 0.91
RPH3AL-206ENST00000570954 POLA1P09884 1462 aaPredicted RBP20.75■□□□□ 0.91
RPH3AL-206ENST00000570954 FGD5Q6ZNL6 1462 aa20.75■□□□□ 0.91
RPH3AL-206ENST00000570954 SYNJ1O43426 1573 aa20.75■□□□□ 0.91
RPH3AL-206ENST00000570954 TRIM41Q8WV44 630 aa20.74■□□□□ 0.91
RPH3AL-206ENST00000570954 SOGA1O94964 1423 aa20.73■□□□□ 0.91
RPH3AL-206ENST00000570954 CHIC1Q5VXU3 224 aa20.65■□□□□ 0.9
RPH3AL-206ENST00000570954 RAD54L2Q9Y4B4 1467 aa20.62■□□□□ 0.89
RPH3AL-206ENST00000570954 ABCA10Q8WWZ4 1543 aa20.62■□□□□ 0.89
RPH3AL-206ENST00000570954 TARBP1Q13395 1621 aaKnown RBP20.61■□□□□ 0.89
RPH3AL-206ENST00000570954 WDR97A6NE52 1622 aa20.6■□□□□ 0.89
RPH3AL-206ENST00000570954 TDRD9Q8NDG6 1382 aaKnown RBP20.52■□□□□ 0.88
RPH3AL-206ENST00000570954 ZNF608Q9ULD9 1512 aaPredicted RBP20.51■□□□□ 0.87
RPH3AL-206ENST00000570954 KIF27Q86VH2 1401 aa20.51■□□□□ 0.87
RPH3AL-206ENST00000570954 AQRO60306 1485 aaKnown RBP eCLIP20.49■□□□□ 0.87
RPH3AL-206ENST00000570954 GAPVD1Q14C86 1478 aa20.49■□□□□ 0.87
RPH3AL-206ENST00000570954 EIF4G3O43432 1585 aaKnown RBP20.46■□□□□ 0.87
RPH3AL-206ENST00000570954 GRIN2BQ13224 1484 aa20.45■□□□□ 0.86
RPH3AL-206ENST00000570954 ABCA5Q8WWZ7 1642 aa20.43■□□□□ 0.86
RPH3AL-206ENST00000570954 EEA1Q15075 1411 aa20.41■□□□□ 0.86
RPH3AL-206ENST00000570954 ERICH3Q5RHP9 1530 aa20.39■□□□□ 0.85
RPH3AL-206ENST00000570954 MAGI1Q96QZ7 1491 aaPredicted RBP20.37■□□□□ 0.85
RPH3AL-206ENST00000570954 IGF1RP08069 1367 aa20.34■□□□□ 0.85
RPH3AL-206ENST00000570954 PBRM1Q86U86 1689 aa20.32■□□□□ 0.84
RPH3AL-206ENST00000570954 SNAPC4Q5SXM2 1469 aa20.31■□□□□ 0.84
RPH3AL-206ENST00000570954 FHAD1B1AJZ9 1412 aa20.29■□□□□ 0.84
RPH3AL-206ENST00000570954 CHMP7Q8WUX9 453 aaPredicted RBP20.29■□□□□ 0.84
RPH3AL-206ENST00000570954 CSRNP3Q8WYN3 585 aa20.28■□□□□ 0.84
RPH3AL-206ENST00000570954 SYNJ2O15056 1496 aa20.27■□□□□ 0.84
RPH3AL-206ENST00000570954 RUSC2Q8N2Y8 1516 aa20.26■□□□□ 0.83
RPH3AL-206ENST00000570954 CUL7Q14999 1698 aa20.26■□□□□ 0.83
RPH3AL-206ENST00000570954 CARMIL1Q5VZK9 1371 aa20.25■□□□□ 0.83
RPH3AL-206ENST00000570954 FBLN2P98095 1184 aa20.24■□□□□ 0.83
RPH3AL-206ENST00000570954 ADAMTS12P58397 1594 aa20.21■□□□□ 0.83
RPH3AL-206ENST00000570954 FAM9AQ8IZU1 332 aaPredicted RBP20.19■□□□□ 0.82
RPH3AL-206ENST00000570954 OSCARQ8IYS5 282 aa20.18■□□□□ 0.82
RPH3AL-206ENST00000570954 RAPGEF2Q9Y4G8 1499 aa20.17■□□□□ 0.82
RPH3AL-206ENST00000570954 GRIN2AQ12879 1464 aa20.16■□□□□ 0.82
RPH3AL-206ENST00000570954 PRXQ9BXM0 1461 aa20.15■□□□□ 0.82
RPH3AL-206ENST00000570954 CHD1O14646 1710 aa20.09■□□□□ 0.81
RPH3AL-206ENST00000570954 NUP160Q12769 1436 aa20.06■□□□□ 0.8
RPH3AL-206ENST00000570954 KIF21BO75037 1637 aa20.05■□□□□ 0.8
RPH3AL-206ENST00000570954 GOLGA3Q08378 1498 aa20■□□□□ 0.79
RPH3AL-206ENST00000570954 KIAA0586Q9BVV6 1533 aa19.99■□□□□ 0.79
RPH3AL-206ENST00000570954 CEP170Q5SW79 1584 aa19.97■□□□□ 0.79
RPH3AL-206ENST00000570954 UBTFP17480 764 aaKnown RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms