RNA–Protein interactions for RNA: ENST00000371219.2

RBM38-204, Transcript of RNA binding motif protein 38, humanhuman

TSL 2 BASIC

Gene RBM38, Length 760 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-204ENST00000371219 NISCHQ9Y2I1 1504 aa35.52■■■■□ 3.28
RBM38-204ENST00000371219 CCDC180Q9P1Z9 1646 aa31.64■■■□□ 2.66
RBM38-204ENST00000371219 ABCC9O60706 1549 aa30.34■■■□□ 2.45
RBM38-204ENST00000371219 ZCCHC6Q5VYS8 1495 aaKnown RBP29.69■■■□□ 2.34
RBM38-204ENST00000371219 MYO15BQ96JP2 1530 aa29.6■■■□□ 2.33
RBM38-204ENST00000371219 NACADO15069 1562 aa29.6■■■□□ 2.33
RBM38-204ENST00000371219 DCAF1Q9Y4B6 1507 aa29.55■■■□□ 2.32
RBM38-204ENST00000371219 RB1CC1Q8TDY2 1594 aa29.53■■■□□ 2.32
RBM38-204ENST00000371219 DCAF8L2P0C7V8 631 aa29.2■■■□□ 2.26
RBM38-204ENST00000371219 UNC13AQ9UPW8 1703 aa28.91■■■□□ 2.22
RBM38-204ENST00000371219 SCRIBQ14160 1630 aa28.67■■■□□ 2.18
RBM38-204ENST00000371219 BICRAQ9NZM4 1560 aa28.56■■■□□ 2.16
RBM38-204ENST00000371219 SHROOM4Q9ULL8 1493 aa28.51■■■□□ 2.15
RBM38-204ENST00000371219 PABPN1Q86U42 306 aaKnown RBP eCLIP28.26■■■□□ 2.11
RBM38-204ENST00000371219 EIF4G1Q04637 1599 aaKnown RBP27.8■■■□□ 2.04
RBM38-204ENST00000371219 CC2D2AQ9P2K1 1620 aa27.59■■■□□ 2.01
RBM38-204ENST00000371219 BAZ1AQ9NRL2 1556 aaPredicted RBP27.57■■■□□ 2
RBM38-204ENST00000371219 SMARCA4P51532 1647 aa27.54■■■□□ 2
RBM38-204ENST00000371219 CECR2Q9BXF3 1484 aa27.5■■□□□ 1.99
RBM38-204ENST00000371219 DNAJC5BQ9UF47 199 aa27.42■■□□□ 1.98
RBM38-204ENST00000371219 PEG3Q9GZU2 1588 aa27.35■■□□□ 1.97
RBM38-204ENST00000371219 SMARCA2P51531 1590 aa27.34■■□□□ 1.97
RBM38-204ENST00000371219 MROH2BQ7Z745 1585 aa27.31■■□□□ 1.96
RBM38-204ENST00000371219 ATAD2BQ9ULI0 1458 aa27.24■■□□□ 1.95
RBM38-204ENST00000371219 HMGXB3Q12766 1538 aa27.22■■□□□ 1.95
RBM38-204ENST00000371219 NCAPD3P42695 1498 aa27.22■■□□□ 1.95
RBM38-204ENST00000371219 RSF1Q96T23 1441 aaPredicted RBP27.09■■□□□ 1.93
RBM38-204ENST00000371219 BAZ1BQ9UIG0 1483 aaKnown RBP27.06■■□□□ 1.92
RBM38-204ENST00000371219 WIZO95785 1651 aa27.05■■□□□ 1.92
RBM38-204ENST00000371219 TOP2AP11388 1531 aaKnown RBP26.87■■□□□ 1.89
RBM38-204ENST00000371219 LAMC3Q9Y6N6 1575 aa26.54■■□□□ 1.84
RBM38-204ENST00000371219 CCDC88BA6NC98 1476 aa26.42■■□□□ 1.82
RBM38-204ENST00000371219 PRDM2Q13029 1718 aa26.4■■□□□ 1.82
RBM38-204ENST00000371219 SUPT5HO00267 1087 aaKnown RBP26.4■■□□□ 1.82
RBM38-204ENST00000371219 CADPSQ9ULU8 1353 aa26.38■■□□□ 1.81
RBM38-204ENST00000371219 CFTRP13569 1480 aa26.35■■□□□ 1.81
RBM38-204ENST00000371219 NESP48681 1621 aa26.34■■□□□ 1.81
RBM38-204ENST00000371219 PDS5BQ9NTI5 1447 aa26.26■■□□□ 1.79
RBM38-204ENST00000371219 KIF21AQ7Z4S6 1674 aa26.21■■□□□ 1.79
RBM38-204ENST00000371219 ERCC6Q03468 1493 aa26.2■■□□□ 1.78
RBM38-204ENST00000371219 FANCD2Q9BXW9 1451 aa26.1■■□□□ 1.77
RBM38-204ENST00000371219 CEP164Q9UPV0 1460 aa26.08■■□□□ 1.77
RBM38-204ENST00000371219 THOC2Q8NI27 1593 aaKnown RBP26.07■■□□□ 1.76
RBM38-204ENST00000371219 MRC2Q9UBG0 1479 aa25.98■■□□□ 1.75
RBM38-204ENST00000371219 WDR62O43379 1518 aa25.93■■□□□ 1.74
RBM38-204ENST00000371219 CUX2O14529 1486 aa25.93■■□□□ 1.74
RBM38-204ENST00000371219 ABCC8Q09428 1581 aa25.85■■□□□ 1.73
RBM38-204ENST00000371219 URB2Q14146 1524 aaKnown RBP25.8■■□□□ 1.72
RBM38-204ENST00000371219 DNMBPQ6XZF7 1577 aa25.8■■□□□ 1.72
RBM38-204ENST00000371219 TOPBP1Q92547 1522 aa25.73■■□□□ 1.71
RBM38-204ENST00000371219 CUX1P39880 1505 aa25.63■■□□□ 1.69
RBM38-204ENST00000371219 BIVM-ERCC5R4GMW8 1640 aa25.61■■□□□ 1.69
RBM38-204ENST00000371219 TOP2BQ02880 1626 aa25.58■■□□□ 1.69
RBM38-204ENST00000371219 WRNQ14191 1432 aaPredicted RBP eCLIP25.56■■□□□ 1.68
RBM38-204ENST00000371219 POLA1P09884 1462 aaPredicted RBP25.53■■□□□ 1.68
RBM38-204ENST00000371219 IFT140Q96RY7 1462 aa25.53■■□□□ 1.68
RBM38-204ENST00000371219 SYNJ1O43426 1573 aa25.51■■□□□ 1.67
RBM38-204ENST00000371219 FGD5Q6ZNL6 1462 aa25.49■■□□□ 1.67
RBM38-204ENST00000371219 TARBP1Q13395 1621 aaKnown RBP25.48■■□□□ 1.67
RBM38-204ENST00000371219 WDR97A6NE52 1622 aa25.47■■□□□ 1.67
RBM38-204ENST00000371219 SOGA1O94964 1423 aa25.36■■□□□ 1.65
RBM38-204ENST00000371219 EIF4G3O43432 1585 aaKnown RBP25.34■■□□□ 1.65
RBM38-204ENST00000371219 ABCA10Q8WWZ4 1543 aa25.32■■□□□ 1.64
RBM38-204ENST00000371219 RAD54L2Q9Y4B4 1467 aa25.3■■□□□ 1.64
RBM38-204ENST00000371219 ZNF608Q9ULD9 1512 aaPredicted RBP25.27■■□□□ 1.64
RBM38-204ENST00000371219 ABCA5Q8WWZ7 1642 aa25.25■■□□□ 1.63
RBM38-204ENST00000371219 PBRM1Q86U86 1689 aa25.18■■□□□ 1.62
RBM38-204ENST00000371219 AQRO60306 1485 aaKnown RBP eCLIP25.13■■□□□ 1.612e-9■■■■■ 29.3
RBM38-204ENST00000371219 GAPVD1Q14C86 1478 aa25.13■■□□□ 1.61
RBM38-204ENST00000371219 GRIN2BQ13224 1484 aa25.11■■□□□ 1.61
RBM38-204ENST00000371219 TDRD9Q8NDG6 1382 aaKnown RBP25.1■■□□□ 1.61
RBM38-204ENST00000371219 MAGI1Q96QZ7 1491 aaPredicted RBP25.08■■□□□ 1.6
RBM38-204ENST00000371219 ERICH3Q5RHP9 1530 aa25.07■■□□□ 1.6
RBM38-204ENST00000371219 TRIM41Q8WV44 630 aa25.03■■□□□ 1.6
RBM38-204ENST00000371219 KIF27Q86VH2 1401 aa25.03■■□□□ 1.6
RBM38-204ENST00000371219 SNAPC4Q5SXM2 1469 aa25■■□□□ 1.59
RBM38-204ENST00000371219 CHD1O14646 1710 aa24.97■■□□□ 1.59
RBM38-204ENST00000371219 ADAMTS12P58397 1594 aa24.97■■□□□ 1.59
RBM38-204ENST00000371219 CUL7Q14999 1698 aa24.95■■□□□ 1.58
RBM38-204ENST00000371219 SYNJ2O15056 1496 aa24.93■■□□□ 1.58
RBM38-204ENST00000371219 CHIC1Q5VXU3 224 aa24.88■■□□□ 1.57
RBM38-204ENST00000371219 FHAD1B1AJZ9 1412 aa24.86■■□□□ 1.57
RBM38-204ENST00000371219 EEA1Q15075 1411 aa24.84■■□□□ 1.57
RBM38-204ENST00000371219 IGF1RP08069 1367 aa24.8■■□□□ 1.56
RBM38-204ENST00000371219 GRIN2AQ12879 1464 aa24.79■■□□□ 1.56
RBM38-204ENST00000371219 CHMP7Q8WUX9 453 aaPredicted RBP24.74■■□□□ 1.55
RBM38-204ENST00000371219 RUSC2Q8N2Y8 1516 aa24.73■■□□□ 1.55
RBM38-204ENST00000371219 OSCARQ8IYS5 282 aa24.72■■□□□ 1.55
RBM38-204ENST00000371219 CLASP1Q7Z460 1538 aa24.69■■□□□ 1.54
RBM38-204ENST00000371219 NUP160Q12769 1436 aa24.69■■□□□ 1.54
RBM38-204ENST00000371219 CARMIL1Q5VZK9 1371 aa24.68■■□□□ 1.54
RBM38-204ENST00000371219 FBLN2P98095 1184 aa24.67■■□□□ 1.54
RBM38-204ENST00000371219 CEP170Q5SW79 1584 aa24.65■■□□□ 1.54
RBM38-204ENST00000371219 PRXQ9BXM0 1461 aa24.64■■□□□ 1.53
RBM38-204ENST00000371219 RAPGEF2Q9Y4G8 1499 aa24.64■■□□□ 1.53
RBM38-204ENST00000371219 DNAJC5Q9H3Z4 198 aa24.59■■□□□ 1.53
RBM38-204ENST00000371219 KIF21BO75037 1637 aa24.57■■□□□ 1.52
RBM38-204ENST00000371219 SHROOM2Q13796 1616 aa24.54■■□□□ 1.52
RBM38-204ENST00000371219 CSRNP3Q8WYN3 585 aa24.54■■□□□ 1.52
RBM38-204ENST00000371219 CTTNBP2Q8WZ74 1663 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms