Protein–RNA interactions for Protein: Q8IWS0

PHF6, PHD finger protein 6, humanhuman

Known RBP eCLIP

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF6Q8IWS0 EIF4A1-211ENST00000578754 547 ntTSL 45.9□□□□□ -1.465e-7■■■□□ 18.4
PHF6Q8IWS0 SNORD91B-201ENST00000391250 95 nt5.13□□□□□ -1.591e-323■■■□□ 18.4
PHF6Q8IWS0 SNORD91B-202ENST00000608459 222 ntBASIC4.6□□□□□ -1.671e-323■■■□□ 18.4
PHF6Q8IWS0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.36e-7■■■□□ 18.3
PHF6Q8IWS0 NUP210-202ENST00000420141 3134 ntTSL 1 (best)21.8■■□□□ 1.083e-6■■■□□ 18.3
PHF6Q8IWS0 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.213e-6■■■□□ 18.3
PHF6Q8IWS0 RREB1-205ENST00000467782 243 ntTSL 518.34■□□□□ 0.535e-7■■■□□ 18.2
PHF6Q8IWS0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.455e-7■■■□□ 18.2
PHF6Q8IWS0 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.43□□□□□ -0.265e-7■■■□□ 18.2
PHF6Q8IWS0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.934e-7■■■□□ 18.2
PHF6Q8IWS0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.774e-7■■■□□ 18.2
PHF6Q8IWS0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.372e-6■■■□□ 18
PHF6Q8IWS0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.38■□□□□ 0.531e-7■■■□□ 18
PHF6Q8IWS0 PTBP1-210ENST00000586944 4661 ntTSL 216.61■□□□□ 0.251e-7■■■□□ 18
PHF6Q8IWS0 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.011e-7■■■□□ 18
PHF6Q8IWS0 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.99□□□□□ -0.011e-7■■■□□ 18
PHF6Q8IWS0 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.081e-7■■■□□ 18
PHF6Q8IWS0 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.78□□□□□ -0.21e-7■■■□□ 18
PHF6Q8IWS0 PTBP1-213ENST00000587191 357 ntTSL 512.96□□□□□ -0.331e-7■■■□□ 18
PHF6Q8IWS0 TMC6-219ENST00000591594 614 ntTSL 318.86■□□□□ 0.611e-6■■■□□ 17.9
PHF6Q8IWS0 RPLP2-202ENST00000524867 598 ntTSL 228.46■■■□□ 2.151e-323■■■□□ 17.9
PHF6Q8IWS0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.631e-323■■■□□ 17.9
PHF6Q8IWS0 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.411e-323■■■□□ 17.9
PHF6Q8IWS0 RPLP2-208ENST00000532004 353 ntTSL 316.89■□□□□ 0.291e-323■■■□□ 17.9
PHF6Q8IWS0 SNORA52-201ENST00000362915 134 ntBASIC13.13□□□□□ -0.311e-323■■■□□ 17.9
PHF6Q8IWS0 RPLP2-203ENST00000525722 489 ntTSL 212.88□□□□□ -0.351e-323■■■□□ 17.9
PHF6Q8IWS0 RPLP2-204ENST00000526222 350 ntTSL 212.88□□□□□ -0.351e-323■■■□□ 17.9
PHF6Q8IWS0 RPLP2-206ENST00000530398 313 ntTSL 312.88□□□□□ -0.351e-323■■■□□ 17.9
PHF6Q8IWS0 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC15.5■□□□□ 0.072e-8■■■□□ 17.9
PHF6Q8IWS0 DUXAP9-205ENST00000619938 642 ntTSL 1 (best)13.03□□□□□ -0.322e-8■■■□□ 17.9
PHF6Q8IWS0 DUXAP9-203ENST00000610585 903 ntTSL 312.34□□□□□ -0.432e-8■■■□□ 17.9
PHF6Q8IWS0 DUXAP9-207ENST00000621361 2397 ntTSL 1 (best)7.19□□□□□ -1.262e-8■■■□□ 17.9
PHF6Q8IWS0 DYRK1A-207ENST00000462274 1189 ntTSL 1 (best)29.39■■■□□ 2.32e-8■■■□□ 17.8
PHF6Q8IWS0 DYRK1A-209ENST00000608928 483 ntTSL 525.11■■□□□ 1.612e-8■■■□□ 17.8
PHF6Q8IWS0 VEGFA-211ENST00000476772 1683 ntTSL 1 (best)27.9■■■□□ 2.067e-15■■■□□ 17.8
PHF6Q8IWS0 VEGFA-217ENST00000518538 535 ntTSL 223.86■■□□□ 1.417e-15■■■□□ 17.8
PHF6Q8IWS0 VEGFA-216ENST00000512683 475 ntTSL 1 (best)14.94□□□□□ -0.027e-15■■■□□ 17.8
PHF6Q8IWS0 SNORD11B-201ENST00000607707 90 ntBASIC3.66□□□□□ -1.821e-71■■■□□ 17.7
PHF6Q8IWS0 OAZ1-205ENST00000589361 679 ntTSL 1 (best)17.78■□□□□ 0.443e-32■■■□□ 17.6
PHF6Q8IWS0 ANKRD11-210ENST00000566858 580 ntTSL 418.78■□□□□ 0.61e-6■■■□□ 17.6
PHF6Q8IWS0 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.47■□□□□ 0.231e-6■■■□□ 17.6
PHF6Q8IWS0 ANKRD11-216ENST00000568924 587 ntTSL 414.52□□□□□ -0.091e-6■■■□□ 17.6
PHF6Q8IWS0 ANKRD11-213ENST00000567736 2750 ntTSL 214.42□□□□□ -0.11e-6■■■□□ 17.6
PHF6Q8IWS0 SEPT5-211ENST00000455843 4113 ntTSL 1 (best)13.87□□□□□ -0.191e-6■■■□□ 17.6
PHF6Q8IWS0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.23■□□□□ 0.833e-6■■■□□ 17.5
PHF6Q8IWS0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.41■□□□□ 0.73e-6■■■□□ 17.5
PHF6Q8IWS0 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.49■□□□□ 0.553e-6■■■□□ 17.5
PHF6Q8IWS0 MED16-209ENST00000592943 1628 ntTSL 1 (best)17.32■□□□□ 0.363e-6■■■□□ 17.5
PHF6Q8IWS0 MED16-205ENST00000586017 1403 ntTSL 1 (best)16.21■□□□□ 0.193e-6■■■□□ 17.5
PHF6Q8IWS0 MED16-211ENST00000606828 599 ntTSL 1 (best)15.31■□□□□ 0.043e-6■■■□□ 17.5
PHF6Q8IWS0 MED16-212ENST00000607471 2004 ntTSL 1 (best)15.2■□□□□ 0.023e-6■■■□□ 17.5
PHF6Q8IWS0 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.043e-6■■■□□ 17.5
PHF6Q8IWS0 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.093e-6■■■□□ 17.5
PHF6Q8IWS0 MED16-210ENST00000606248 3181 ntTSL 1 (best)13.32□□□□□ -0.283e-6■■■□□ 17.5
PHF6Q8IWS0 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.343e-6■■■□□ 17.5
PHF6Q8IWS0 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.43e-6■■■□□ 17.5
PHF6Q8IWS0 SH2B1-212ENST00000567536 484 ntTSL 324.52■■□□□ 1.522e-7■■■□□ 17.5
PHF6Q8IWS0 PIEZO1-209ENST00000490756 446 ntTSL 323.89■■□□□ 1.412e-7■■■□□ 17.5
PHF6Q8IWS0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.532e-7■■■□□ 17.5
PHF6Q8IWS0 HSPG2-214ENST00000635682 921 ntTSL 517.1■□□□□ 0.332e-7■■■□□ 17.5
PHF6Q8IWS0 PFKL-211ENST00000498841 3122 ntTSL 1 (best)15.83■□□□□ 0.122e-7■■■□□ 17.5
PHF6Q8IWS0 SH2B1-210ENST00000566176 546 ntTSL 410.83□□□□□ -0.682e-7■■■□□ 17.5
PHF6Q8IWS0 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.151e-6■■■□□ 17.5
PHF6Q8IWS0 AGRN-202ENST00000419249 861 ntTSL 320.04■□□□□ 0.82e-6■■■□□ 17.4
PHF6Q8IWS0 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.221e-28■■■□□ 17.4
PHF6Q8IWS0 CTBP2-206ENST00000460976 603 ntTSL 530.29■■■□□ 2.445e-6■■■□□ 17.4
PHF6Q8IWS0 CTBP2-207ENST00000467395 410 ntTSL 326.43■■□□□ 1.825e-6■■■□□ 17.4
PHF6Q8IWS0 CTBP2-208ENST00000476817 705 ntTSL 323.85■■□□□ 1.415e-6■■■□□ 17.4
PHF6Q8IWS0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.285e-6■■■□□ 17.4
PHF6Q8IWS0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.585e-6■■■□□ 17.4
PHF6Q8IWS0 CTBP2-212ENST00000530884 578 ntTSL 313.58□□□□□ -0.245e-6■■■□□ 17.4
PHF6Q8IWS0 CTBP2-203ENST00000337195 6939 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.745e-6■■■□□ 17.4
PHF6Q8IWS0 RPL4-216ENST00000569438 565 ntTSL 516.69■□□□□ 0.265e-35■■■□□ 17.3
PHF6Q8IWS0 RPL4-212ENST00000566622 817 ntTSL 216.11■□□□□ 0.175e-35■■■□□ 17.3
PHF6Q8IWS0 RPL4-205ENST00000564439 582 ntTSL 311.68□□□□□ -0.545e-35■■■□□ 17.3
PHF6Q8IWS0 SMG1P3-202ENST00000437413 589 ntTSL 423.4■■□□□ 1.341e-6■■■□□ 17.3
PHF6Q8IWS0 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.6■□□□□ 0.091e-6■■■□□ 17.3
PHF6Q8IWS0 PRSS21-209ENST00000575739 378 ntTSL 310.95□□□□□ -0.663e-9■■■□□ 17.2
PHF6Q8IWS0 CPNE7-203ENST00000525982 576 ntTSL 524.77■■□□□ 1.561e-6■■■□□ 17.1
PHF6Q8IWS0 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.46■□□□□ 0.072e-6■■■□□ 17.1
PHF6Q8IWS0 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.072e-6■■■□□ 17.1
PHF6Q8IWS0 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.7□□□□□ -0.222e-6■■■□□ 17.1
PHF6Q8IWS0 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.32e-6■■■□□ 17.1
PHF6Q8IWS0 LSS-210ENST00000491729 2143 ntTSL 212.56□□□□□ -0.42e-6■■■□□ 17.1
PHF6Q8IWS0 LSS-203ENST00000419093 517 ntTSL 311.08□□□□□ -0.642e-6■■■□□ 17.1
PHF6Q8IWS0 LSS-208ENST00000474319 3601 ntTSL 210.22□□□□□ -0.772e-6■■■□□ 17.1
PHF6Q8IWS0 TMC6-222ENST00000592076 693 ntTSL 318.16■□□□□ 0.52e-6■■■□□ 17.1
PHF6Q8IWS0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.363e-6■■■□□ 17.1
PHF6Q8IWS0 GATA1-201ENST00000376665 1140 ntTSL 5 BASIC13.29□□□□□ -0.283e-6■■■□□ 17.1
PHF6Q8IWS0 KMT5A-209ENST00000537270 352 ntTSL 520.42■□□□□ 0.861e-7■■■□□ 17.1
PHF6Q8IWS0 FASN-207ENST00000635197 627 ntTSL 318.45■□□□□ 0.548e-8■■■□□ 17
PHF6Q8IWS0 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC32.51■■■□□ 2.792e-6■■■□□ 17
PHF6Q8IWS0 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.032e-6■■■□□ 17
PHF6Q8IWS0 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.02■■□□□ 1.762e-6■■■□□ 17
PHF6Q8IWS0 SIRT7-210ENST00000572902 909 ntTSL 323.73■■□□□ 1.392e-6■■■□□ 17
PHF6Q8IWS0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.142e-6■■■□□ 17
PHF6Q8IWS0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.57■■□□□ 1.042e-6■■■□□ 17
PHF6Q8IWS0 LINC01089-210ENST00000543167 1059 ntTSL 221.01■□□□□ 0.952e-6■■■□□ 17
PHF6Q8IWS0 LINC01089-201ENST00000428029 1024 ntTSL 220.96■□□□□ 0.952e-6■■■□□ 17
PHF6Q8IWS0 GPI-212ENST00000589985 1516 ntTSL 320.74■□□□□ 0.914e-31■■■□□ 17
Retrieved 100 of 4,170 protein–RNA pairs in 133.2 ms