RNA–Protein interactions for RNA: ENST00000587191.3

PTBP1-213, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5

Gene PTBP1, Length 357 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-213ENST00000587191 NISCHQ9Y2I1 1504 aa27.89■■■□□ 2.06
PTBP1-213ENST00000587191 CCDC180Q9P1Z9 1646 aa24.82■■□□□ 1.56
PTBP1-213ENST00000587191 ABCC9O60706 1549 aa24.51■■□□□ 1.51
PTBP1-213ENST00000587191 DCAF8L2P0C7V8 631 aa23.61■■□□□ 1.37
PTBP1-213ENST00000587191 RB1CC1Q8TDY2 1594 aa23.44■■□□□ 1.34
PTBP1-213ENST00000587191 NACADO15069 1562 aa23.33■■□□□ 1.33
PTBP1-213ENST00000587191 ZCCHC6Q5VYS8 1495 aaKnown RBP23.26■■□□□ 1.31
PTBP1-213ENST00000587191 MYO15BQ96JP2 1530 aa23.23■■□□□ 1.31
PTBP1-213ENST00000587191 DCAF1Q9Y4B6 1507 aa23.15■■□□□ 1.3
PTBP1-213ENST00000587191 PABPN1Q86U42 306 aaKnown RBP eCLIP22.95■■□□□ 1.26
PTBP1-213ENST00000587191 UNC13AQ9UPW8 1703 aa22.71■■□□□ 1.23
PTBP1-213ENST00000587191 DNAJC5BQ9UF47 199 aa22.7■■□□□ 1.22
PTBP1-213ENST00000587191 BICRAQ9NZM4 1560 aa22.59■■□□□ 1.21
PTBP1-213ENST00000587191 SCRIBQ14160 1630 aa22.55■■□□□ 1.2
PTBP1-213ENST00000587191 SHROOM4Q9ULL8 1493 aa22.42■■□□□ 1.18
PTBP1-213ENST00000587191 EIF4G1Q04637 1599 aaKnown RBP22.09■■□□□ 1.13
PTBP1-213ENST00000587191 CC2D2AQ9P2K1 1620 aa22.08■■□□□ 1.13
PTBP1-213ENST00000587191 CECR2Q9BXF3 1484 aa22.06■■□□□ 1.12
PTBP1-213ENST00000587191 BAZ1AQ9NRL2 1556 aaPredicted RBP21.65■■□□□ 1.06
PTBP1-213ENST00000587191 SMARCA4P51532 1647 aa21.62■■□□□ 1.05
PTBP1-213ENST00000587191 NCAPD3P42695 1498 aa21.55■■□□□ 1.04
PTBP1-213ENST00000587191 ATAD2BQ9ULI0 1458 aa21.51■■□□□ 1.03
PTBP1-213ENST00000587191 SMARCA2P51531 1590 aa21.5■■□□□ 1.03
PTBP1-213ENST00000587191 MROH2BQ7Z745 1585 aa21.45■■□□□ 1.02
PTBP1-213ENST00000587191 PEG3Q9GZU2 1588 aa21.44■■□□□ 1.02
PTBP1-213ENST00000587191 HMGXB3Q12766 1538 aa21.39■■□□□ 1.01
PTBP1-213ENST00000587191 BAZ1BQ9UIG0 1483 aaKnown RBP21.37■■□□□ 1.01
PTBP1-213ENST00000587191 RSF1Q96T23 1441 aaPredicted RBP21.27■■□□□ 1
PTBP1-213ENST00000587191 ERCC6Q03468 1493 aa21.24■□□□□ 0.99
PTBP1-213ENST00000587191 WIZO95785 1651 aa21.23■□□□□ 0.99
PTBP1-213ENST00000587191 NESP48681 1621 aa21.07■□□□□ 0.96
PTBP1-213ENST00000587191 TOP2AP11388 1531 aaKnown RBP21.07■□□□□ 0.96
PTBP1-213ENST00000587191 CUX2O14529 1486 aa21■□□□□ 0.95
PTBP1-213ENST00000587191 LAMC3Q9Y6N6 1575 aa20.99■□□□□ 0.95
PTBP1-213ENST00000587191 PDS5BQ9NTI5 1447 aa20.99■□□□□ 0.95
PTBP1-213ENST00000587191 CADPSQ9ULU8 1353 aa20.97■□□□□ 0.95
PTBP1-213ENST00000587191 CCDC88BA6NC98 1476 aa20.77■□□□□ 0.92
PTBP1-213ENST00000587191 SUPT5HO00267 1087 aaKnown RBP20.76■□□□□ 0.91
PTBP1-213ENST00000587191 DNAJC5Q9H3Z4 198 aa20.74■□□□□ 0.91
PTBP1-213ENST00000587191 CFTRP13569 1480 aa20.74■□□□□ 0.91
PTBP1-213ENST00000587191 KIF21AQ7Z4S6 1674 aa20.73■□□□□ 0.91
PTBP1-213ENST00000587191 THOC2Q8NI27 1593 aaKnown RBP20.7■□□□□ 0.9
PTBP1-213ENST00000587191 FANCD2Q9BXW9 1451 aa20.69■□□□□ 0.9
PTBP1-213ENST00000587191 MRC2Q9UBG0 1479 aa20.69■□□□□ 0.9
PTBP1-213ENST00000587191 CEP164Q9UPV0 1460 aa20.69■□□□□ 0.9
PTBP1-213ENST00000587191 PRDM2Q13029 1718 aa20.65■□□□□ 0.9
PTBP1-213ENST00000587191 WDR62O43379 1518 aa20.56■□□□□ 0.88
PTBP1-213ENST00000587191 URB2Q14146 1524 aaKnown RBP20.42■□□□□ 0.86
PTBP1-213ENST00000587191 ABCC8Q09428 1581 aa20.38■□□□□ 0.85
PTBP1-213ENST00000587191 TOPBP1Q92547 1522 aa20.29■□□□□ 0.84
PTBP1-213ENST00000587191 DNMBPQ6XZF7 1577 aa20.28■□□□□ 0.84
PTBP1-213ENST00000587191 IFT140Q96RY7 1462 aa20.27■□□□□ 0.84
PTBP1-213ENST00000587191 OSCARQ8IYS5 282 aa20.27■□□□□ 0.84
PTBP1-213ENST00000587191 ZNF608Q9ULD9 1512 aaPredicted RBP20.14■□□□□ 0.81
PTBP1-213ENST00000587191 CUX1P39880 1505 aa20.13■□□□□ 0.81
PTBP1-213ENST00000587191 SOGA1O94964 1423 aa20.13■□□□□ 0.81
PTBP1-213ENST00000587191 POLA1P09884 1462 aaPredicted RBP20.1■□□□□ 0.81
PTBP1-213ENST00000587191 FBLN2P98095 1184 aa20.09■□□□□ 0.81
PTBP1-213ENST00000587191 AQRO60306 1485 aaKnown RBP eCLIP20.07■□□□□ 0.83e-8■■■■■ 35.3
PTBP1-213ENST00000587191 WRNQ14191 1432 aaPredicted RBP eCLIP20.07■□□□□ 0.83e-6■■■■□ 19.3
PTBP1-213ENST00000587191 TRIM41Q8WV44 630 aa20.06■□□□□ 0.8
PTBP1-213ENST00000587191 FGD5Q6ZNL6 1462 aa20.05■□□□□ 0.8
PTBP1-213ENST00000587191 RAD54L2Q9Y4B4 1467 aa20.05■□□□□ 0.8
PTBP1-213ENST00000587191 TOP2BQ02880 1626 aa20.04■□□□□ 0.8
PTBP1-213ENST00000587191 BIVM-ERCC5R4GMW8 1640 aa20.04■□□□□ 0.8
PTBP1-213ENST00000587191 TDRD9Q8NDG6 1382 aaKnown RBP20.04■□□□□ 0.8
PTBP1-213ENST00000587191 TARBP1Q13395 1621 aaKnown RBP20.03■□□□□ 0.8
PTBP1-213ENST00000587191 EIF4G3O43432 1585 aaKnown RBP20■□□□□ 0.79
PTBP1-213ENST00000587191 WDR97A6NE52 1622 aa19.99■□□□□ 0.79
PTBP1-213ENST00000587191 SYNJ1O43426 1573 aa19.98■□□□□ 0.79
PTBP1-213ENST00000587191 CHMP7Q8WUX9 453 aaPredicted RBP19.96■□□□□ 0.79
PTBP1-213ENST00000587191 ABCA10Q8WWZ4 1543 aa19.91■□□□□ 0.78
PTBP1-213ENST00000587191 GRIN2BQ13224 1484 aa19.88■□□□□ 0.77
PTBP1-213ENST00000587191 GAPVD1Q14C86 1478 aa19.85■□□□□ 0.77
PTBP1-213ENST00000587191 SNAPC4Q5SXM2 1469 aa19.84■□□□□ 0.77
PTBP1-213ENST00000587191 MAGI1Q96QZ7 1491 aaPredicted RBP19.82■□□□□ 0.76
PTBP1-213ENST00000587191 ABCA5Q8WWZ7 1642 aa19.8■□□□□ 0.76
PTBP1-213ENST00000587191 CHD1O14646 1710 aa19.78■□□□□ 0.76
PTBP1-213ENST00000587191 CYB5RLQ6IPT4 315 aa19.77■□□□□ 0.76
PTBP1-213ENST00000587191 PBRM1Q86U86 1689 aa19.77■□□□□ 0.76
PTBP1-213ENST00000587191 SYNJ2O15056 1496 aa19.75■□□□□ 0.75
PTBP1-213ENST00000587191 ARHGEF11O15085 1522 aa19.73■□□□□ 0.75
PTBP1-213ENST00000587191 RIMBP3CA6NJZ7 1639 aa19.72■□□□□ 0.75
PTBP1-213ENST00000587191 RIMBP3BA6NNM3 1639 aa19.72■□□□□ 0.75
PTBP1-213ENST00000587191 RIMBP3Q9UFD9 1639 aa19.72■□□□□ 0.75
PTBP1-213ENST00000587191 ERICH3Q5RHP9 1530 aa19.69■□□□□ 0.74
PTBP1-213ENST00000587191 KIF27Q86VH2 1401 aa19.68■□□□□ 0.74
PTBP1-213ENST00000587191 FHAD1B1AJZ9 1412 aa19.61■□□□□ 0.73
PTBP1-213ENST00000587191 ADAMTS12P58397 1594 aa19.61■□□□□ 0.73
PTBP1-213ENST00000587191 GRIN2AQ12879 1464 aa19.58■□□□□ 0.72
PTBP1-213ENST00000587191 CLASP1Q7Z460 1538 aa19.56■□□□□ 0.72
PTBP1-213ENST00000587191 CUL7Q14999 1698 aa19.56■□□□□ 0.72
PTBP1-213ENST00000587191 TRHP20396 242 aaPredicted RBP19.55■□□□□ 0.72
PTBP1-213ENST00000587191 IGF1RP08069 1367 aa19.53■□□□□ 0.72
PTBP1-213ENST00000587191 ARAP1Q96P48 1450 aa19.53■□□□□ 0.72
PTBP1-213ENST00000587191 NUP160Q12769 1436 aa19.47■□□□□ 0.71
PTBP1-213ENST00000587191 CHIC1Q5VXU3 224 aa19.46■□□□□ 0.71
PTBP1-213ENST00000587191 JPH4Q96JJ6 628 aa19.45■□□□□ 0.7
PTBP1-213ENST00000587191 CARMIL1Q5VZK9 1371 aa19.44■□□□□ 0.7
PTBP1-213ENST00000587191 EEA1Q15075 1411 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms