RNA–Protein interactions for RNA: ENST00000617672.1

MED16-214, Transcript of mediator complex subunit 16, humanhuman

TSL 5 BASIC

Gene MED16, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED16-214ENST00000617672 NISCHQ9Y2I1 1504 aa40.93■■■■■ 4.14
MED16-214ENST00000617672 CCDC180Q9P1Z9 1646 aa36.45■■■■□ 3.42
MED16-214ENST00000617672 ABCC9O60706 1549 aa35.64■■■■□ 3.3
MED16-214ENST00000617672 RB1CC1Q8TDY2 1594 aa34.31■■■■□ 3.08
MED16-214ENST00000617672 NACADO15069 1562 aa34.25■■■■□ 3.07
MED16-214ENST00000617672 DCAF8L2P0C7V8 631 aa34.2■■■■□ 3.07
MED16-214ENST00000617672 ZCCHC6Q5VYS8 1495 aaKnown RBP34.07■■■■□ 3.04
MED16-214ENST00000617672 MYO15BQ96JP2 1530 aa34.03■■■■□ 3.04
MED16-214ENST00000617672 DCAF1Q9Y4B6 1507 aa33.87■■■■□ 3.01
MED16-214ENST00000617672 UNC13AQ9UPW8 1703 aa33.57■■■□□ 2.96
MED16-214ENST00000617672 PABPN1Q86U42 306 aaKnown RBP eCLIP33.28■■■□□ 2.92
MED16-214ENST00000617672 BICRAQ9NZM4 1560 aa33.24■■■□□ 2.91
MED16-214ENST00000617672 SCRIBQ14160 1630 aa33.22■■■□□ 2.91
MED16-214ENST00000617672 SHROOM4Q9ULL8 1493 aa32.91■■■□□ 2.86
MED16-214ENST00000617672 DNAJC5BQ9UF47 199 aa32.7■■■□□ 2.83
MED16-214ENST00000617672 EIF4G1Q04637 1599 aaKnown RBP32.37■■■□□ 2.77
MED16-214ENST00000617672 CC2D2AQ9P2K1 1620 aa32.26■■■□□ 2.76
MED16-214ENST00000617672 CECR2Q9BXF3 1484 aa32.03■■■□□ 2.72
MED16-214ENST00000617672 SMARCA4P51532 1647 aa31.78■■■□□ 2.68
MED16-214ENST00000617672 BAZ1AQ9NRL2 1556 aaPredicted RBP31.73■■■□□ 2.67
MED16-214ENST00000617672 SMARCA2P51531 1590 aa31.59■■■□□ 2.65
MED16-214ENST00000617672 ATAD2BQ9ULI0 1458 aa31.59■■■□□ 2.65
MED16-214ENST00000617672 NCAPD3P42695 1498 aa31.58■■■□□ 2.65
MED16-214ENST00000617672 MROH2BQ7Z745 1585 aa31.53■■■□□ 2.64
MED16-214ENST00000617672 PEG3Q9GZU2 1588 aa31.46■■■□□ 2.63
MED16-214ENST00000617672 HMGXB3Q12766 1538 aa31.44■■■□□ 2.62
MED16-214ENST00000617672 BAZ1BQ9UIG0 1483 aaKnown RBP31.34■■■□□ 2.61
MED16-214ENST00000617672 WIZO95785 1651 aa31.22■■■□□ 2.59
MED16-214ENST00000617672 RSF1Q96T23 1441 aaPredicted RBP31.15■■■□□ 2.58
MED16-214ENST00000617672 TOP2AP11388 1531 aaKnown RBP30.88■■■□□ 2.53
MED16-214ENST00000617672 NESP48681 1621 aa30.82■■■□□ 2.52
MED16-214ENST00000617672 LAMC3Q9Y6N6 1575 aa30.79■■■□□ 2.52
MED16-214ENST00000617672 ERCC6Q03468 1493 aa30.75■■■□□ 2.51
MED16-214ENST00000617672 CADPSQ9ULU8 1353 aa30.66■■■□□ 2.5
MED16-214ENST00000617672 PDS5BQ9NTI5 1447 aa30.56■■■□□ 2.48
MED16-214ENST00000617672 KIF21AQ7Z4S6 1674 aa30.52■■■□□ 2.48
MED16-214ENST00000617672 CCDC88BA6NC98 1476 aa30.5■■■□□ 2.47
MED16-214ENST00000617672 CFTRP13569 1480 aa30.47■■■□□ 2.47
MED16-214ENST00000617672 CUX2O14529 1486 aa30.43■■■□□ 2.46
MED16-214ENST00000617672 THOC2Q8NI27 1593 aaKnown RBP30.39■■■□□ 2.46
MED16-214ENST00000617672 SUPT5HO00267 1087 aaKnown RBP30.35■■■□□ 2.45
MED16-214ENST00000617672 PRDM2Q13029 1718 aa30.33■■■□□ 2.45
MED16-214ENST00000617672 FANCD2Q9BXW9 1451 aa30.31■■■□□ 2.44
MED16-214ENST00000617672 CEP164Q9UPV0 1460 aa30.29■■■□□ 2.44
MED16-214ENST00000617672 MRC2Q9UBG0 1479 aa30.25■■■□□ 2.43
MED16-214ENST00000617672 WDR62O43379 1518 aa30.15■■■□□ 2.42
MED16-214ENST00000617672 URB2Q14146 1524 aaKnown RBP30.01■■■□□ 2.39
MED16-214ENST00000617672 ABCC8Q09428 1581 aa29.85■■■□□ 2.37
MED16-214ENST00000617672 TOPBP1Q92547 1522 aa29.83■■■□□ 2.37
MED16-214ENST00000617672 DNMBPQ6XZF7 1577 aa29.81■■■□□ 2.36
MED16-214ENST00000617672 IFT140Q96RY7 1462 aa29.65■■■□□ 2.34
MED16-214ENST00000617672 CUX1P39880 1505 aa29.59■■■□□ 2.33
MED16-214ENST00000617672 POLA1P09884 1462 aaPredicted RBP29.56■■■□□ 2.32
MED16-214ENST00000617672 TARBP1Q13395 1621 aaKnown RBP29.52■■■□□ 2.32
MED16-214ENST00000617672 DNAJC5Q9H3Z4 198 aa29.51■■■□□ 2.31
MED16-214ENST00000617672 ZNF608Q9ULD9 1512 aaPredicted RBP29.5■■■□□ 2.31
MED16-214ENST00000617672 FGD5Q6ZNL6 1462 aa29.49■■■□□ 2.31
MED16-214ENST00000617672 SOGA1O94964 1423 aa29.45■■■□□ 2.31
MED16-214ENST00000617672 RAD54L2Q9Y4B4 1467 aa29.43■■■□□ 2.3
MED16-214ENST00000617672 EIF4G3O43432 1585 aaKnown RBP29.41■■■□□ 2.3
MED16-214ENST00000617672 WRNQ14191 1432 aaPredicted RBP eCLIP29.38■■■□□ 2.29
MED16-214ENST00000617672 BIVM-ERCC5R4GMW8 1640 aa29.35■■■□□ 2.29
MED16-214ENST00000617672 TOP2BQ02880 1626 aa29.34■■■□□ 2.29
MED16-214ENST00000617672 AQRO60306 1485 aaKnown RBP eCLIP29.33■■■□□ 2.291e-6■■■■□ 25.8
MED16-214ENST00000617672 SYNJ1O43426 1573 aa29.31■■■□□ 2.28
MED16-214ENST00000617672 WDR97A6NE52 1622 aa29.31■■■□□ 2.28
MED16-214ENST00000617672 TDRD9Q8NDG6 1382 aaKnown RBP29.27■■■□□ 2.28
MED16-214ENST00000617672 ABCA10Q8WWZ4 1543 aa29.21■■■□□ 2.27
MED16-214ENST00000617672 OSCARQ8IYS5 282 aa29.16■■■□□ 2.26
MED16-214ENST00000617672 GRIN2BQ13224 1484 aa29.12■■■□□ 2.25
MED16-214ENST00000617672 GAPVD1Q14C86 1478 aa29.11■■■□□ 2.25
MED16-214ENST00000617672 ABCA5Q8WWZ7 1642 aa29.11■■■□□ 2.25
MED16-214ENST00000617672 PBRM1Q86U86 1689 aa29.1■■■□□ 2.25
MED16-214ENST00000617672 CHD1O14646 1710 aa29.08■■■□□ 2.25
MED16-214ENST00000617672 SNAPC4Q5SXM2 1469 aa29.07■■■□□ 2.24
MED16-214ENST00000617672 MAGI1Q96QZ7 1491 aaPredicted RBP29.05■■■□□ 2.24
MED16-214ENST00000617672 FBLN2P98095 1184 aa29.01■■■□□ 2.23
MED16-214ENST00000617672 SYNJ2O15056 1496 aa28.93■■■□□ 2.22
MED16-214ENST00000617672 CHMP7Q8WUX9 453 aaPredicted RBP28.93■■■□□ 2.22
MED16-214ENST00000617672 ERICH3Q5RHP9 1530 aa28.87■■■□□ 2.21
MED16-214ENST00000617672 ADAMTS12P58397 1594 aa28.83■■■□□ 2.21
MED16-214ENST00000617672 KIF27Q86VH2 1401 aa28.78■■■□□ 2.2
MED16-214ENST00000617672 FHAD1B1AJZ9 1412 aa28.77■■■□□ 2.2
MED16-214ENST00000617672 GRIN2AQ12879 1464 aa28.73■■■□□ 2.19
MED16-214ENST00000617672 CLASP1Q7Z460 1538 aa28.72■■■□□ 2.19
MED16-214ENST00000617672 RIMBP3CA6NJZ7 1639 aa28.71■■■□□ 2.19
MED16-214ENST00000617672 RIMBP3BA6NNM3 1639 aa28.71■■■□□ 2.19
MED16-214ENST00000617672 RIMBP3Q9UFD9 1639 aa28.71■■■□□ 2.19
MED16-214ENST00000617672 TRIM41Q8WV44 630 aa28.68■■■□□ 2.18
MED16-214ENST00000617672 ARHGEF11O15085 1522 aa28.68■■■□□ 2.18
MED16-214ENST00000617672 IGF1RP08069 1367 aa28.65■■■□□ 2.18
MED16-214ENST00000617672 CUL7Q14999 1698 aa28.63■■■□□ 2.17
MED16-214ENST00000617672 CEP170Q5SW79 1584 aa28.6■■■□□ 2.17
MED16-214ENST00000617672 NUP160Q12769 1436 aa28.6■■■□□ 2.17
MED16-214ENST00000617672 CARMIL1Q5VZK9 1371 aa28.5■■■□□ 2.15
MED16-214ENST00000617672 RUSC2Q8N2Y8 1516 aa28.48■■■□□ 2.15
MED16-214ENST00000617672 ARAP1Q96P48 1450 aa28.44■■■□□ 2.14
MED16-214ENST00000617672 SHROOM2Q13796 1616 aa28.42■■■□□ 2.14
MED16-214ENST00000617672 CYB5RLQ6IPT4 315 aa28.41■■■□□ 2.14
MED16-214ENST00000617672 RAPGEF2Q9Y4G8 1499 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms