RNA–Protein interactions for RNA: ENST00000569438.2

RPL4-216, Transcript of ribosomal protein L4, humanhuman

TSL 5

Gene RPL4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-216ENST00000569438 NISCHQ9Y2I1 1504 aa35.59■■■■□ 3.29
RPL4-216ENST00000569438 CCDC180Q9P1Z9 1646 aa31.87■■■□□ 2.69
RPL4-216ENST00000569438 ABCC9O60706 1549 aa31.72■■■□□ 2.67
RPL4-216ENST00000569438 RB1CC1Q8TDY2 1594 aa30.3■■■□□ 2.44
RPL4-216ENST00000569438 NACADO15069 1562 aa30.13■■■□□ 2.41
RPL4-216ENST00000569438 DCAF8L2P0C7V8 631 aa30.05■■■□□ 2.4
RPL4-216ENST00000569438 MYO15BQ96JP2 1530 aa29.76■■■□□ 2.36
RPL4-216ENST00000569438 DNAJC5BQ9UF47 199 aa29.59■■■□□ 2.33
RPL4-216ENST00000569438 PABPN1Q86U42 306 aaKnown RBP eCLIP29.57■■■□□ 2.32
RPL4-216ENST00000569438 ZCCHC6Q5VYS8 1495 aaKnown RBP29.52■■■□□ 2.32
RPL4-216ENST00000569438 UNC13AQ9UPW8 1703 aa29.51■■■□□ 2.32
RPL4-216ENST00000569438 DCAF1Q9Y4B6 1507 aa29.43■■■□□ 2.3
RPL4-216ENST00000569438 BICRAQ9NZM4 1560 aa29.34■■■□□ 2.29
RPL4-216ENST00000569438 SHROOM4Q9ULL8 1493 aa29.04■■■□□ 2.24
RPL4-216ENST00000569438 SCRIBQ14160 1630 aa29.02■■■□□ 2.24
RPL4-216ENST00000569438 CC2D2AQ9P2K1 1620 aa28.65■■■□□ 2.18
RPL4-216ENST00000569438 EIF4G1Q04637 1599 aaKnown RBP28.64■■■□□ 2.18
RPL4-216ENST00000569438 CECR2Q9BXF3 1484 aa28.58■■■□□ 2.17
RPL4-216ENST00000569438 NCAPD3P42695 1498 aa27.81■■■□□ 2.04
RPL4-216ENST00000569438 ATAD2BQ9ULI0 1458 aa27.72■■■□□ 2.03
RPL4-216ENST00000569438 SMARCA4P51532 1647 aa27.72■■■□□ 2.03
RPL4-216ENST00000569438 SMARCA2P51531 1590 aa27.69■■■□□ 2.02
RPL4-216ENST00000569438 BAZ1AQ9NRL2 1556 aaPredicted RBP27.65■■■□□ 2.02
RPL4-216ENST00000569438 HMGXB3Q12766 1538 aa27.6■■■□□ 2.01
RPL4-216ENST00000569438 BAZ1BQ9UIG0 1483 aaKnown RBP27.49■■□□□ 1.99
RPL4-216ENST00000569438 PEG3Q9GZU2 1588 aa27.46■■□□□ 1.99
RPL4-216ENST00000569438 ERCC6Q03468 1493 aa27.43■■□□□ 1.98
RPL4-216ENST00000569438 MROH2BQ7Z745 1585 aa27.4■■□□□ 1.98
RPL4-216ENST00000569438 CUX2O14529 1486 aa27.32■■□□□ 1.96
RPL4-216ENST00000569438 NESP48681 1621 aa27.27■■□□□ 1.96
RPL4-216ENST00000569438 LAMC3Q9Y6N6 1575 aa27.16■■□□□ 1.94
RPL4-216ENST00000569438 DNAJC5Q9H3Z4 198 aa27.13■■□□□ 1.93
RPL4-216ENST00000569438 WIZO95785 1651 aa27.07■■□□□ 1.92
RPL4-216ENST00000569438 PDS5BQ9NTI5 1447 aa27.03■■□□□ 1.92
RPL4-216ENST00000569438 CADPSQ9ULU8 1353 aa26.97■■□□□ 1.91
RPL4-216ENST00000569438 THOC2Q8NI27 1593 aaKnown RBP26.96■■□□□ 1.91
RPL4-216ENST00000569438 RSF1Q96T23 1441 aaPredicted RBP26.91■■□□□ 1.9
RPL4-216ENST00000569438 KIF21AQ7Z4S6 1674 aa26.91■■□□□ 1.9
RPL4-216ENST00000569438 TOP2AP11388 1531 aaKnown RBP26.77■■□□□ 1.88
RPL4-216ENST00000569438 MRC2Q9UBG0 1479 aa26.74■■□□□ 1.87
RPL4-216ENST00000569438 CFTRP13569 1480 aa26.69■■□□□ 1.86
RPL4-216ENST00000569438 CEP164Q9UPV0 1460 aa26.68■■□□□ 1.86
RPL4-216ENST00000569438 WDR62O43379 1518 aa26.66■■□□□ 1.86
RPL4-216ENST00000569438 FANCD2Q9BXW9 1451 aa26.66■■□□□ 1.86
RPL4-216ENST00000569438 CCDC88BA6NC98 1476 aa26.47■■□□□ 1.83
RPL4-216ENST00000569438 PRDM2Q13029 1718 aa26.39■■□□□ 1.82
RPL4-216ENST00000569438 URB2Q14146 1524 aaKnown RBP26.39■■□□□ 1.81
RPL4-216ENST00000569438 ABCC8Q09428 1581 aa26.18■■□□□ 1.78
RPL4-216ENST00000569438 TOPBP1Q92547 1522 aa26.15■■□□□ 1.78
RPL4-216ENST00000569438 IFT140Q96RY7 1462 aa26.15■■□□□ 1.78
RPL4-216ENST00000569438 OSCARQ8IYS5 282 aa26.13■■□□□ 1.77
RPL4-216ENST00000569438 DNMBPQ6XZF7 1577 aa26.07■■□□□ 1.76
RPL4-216ENST00000569438 ZNF608Q9ULD9 1512 aaPredicted RBP26.04■■□□□ 1.76
RPL4-216ENST00000569438 TRIM41Q8WV44 630 aa26.01■■□□□ 1.75
RPL4-216ENST00000569438 EIF4G3O43432 1585 aaKnown RBP25.91■■□□□ 1.74
RPL4-216ENST00000569438 POLA1P09884 1462 aaPredicted RBP25.9■■□□□ 1.74
RPL4-216ENST00000569438 TARBP1Q13395 1621 aaKnown RBP25.89■■□□□ 1.74
RPL4-216ENST00000569438 SUPT5HO00267 1087 aaKnown RBP25.87■■□□□ 1.73
RPL4-216ENST00000569438 AQRO60306 1485 aaKnown RBP eCLIP25.85■■□□□ 1.732e-11■■■■■ 43.3
RPL4-216ENST00000569438 SOGA1O94964 1423 aa25.81■■□□□ 1.72
RPL4-216ENST00000569438 RAD54L2Q9Y4B4 1467 aa25.79■■□□□ 1.72
RPL4-216ENST00000569438 FGD5Q6ZNL6 1462 aa25.76■■□□□ 1.71
RPL4-216ENST00000569438 CUX1P39880 1505 aa25.73■■□□□ 1.71
RPL4-216ENST00000569438 TDRD9Q8NDG6 1382 aaKnown RBP25.72■■□□□ 1.71
RPL4-216ENST00000569438 FBLN2P98095 1184 aa25.71■■□□□ 1.71
RPL4-216ENST00000569438 WDR97A6NE52 1622 aa25.69■■□□□ 1.7
RPL4-216ENST00000569438 RIMBP3CA6NJZ7 1639 aa25.68■■□□□ 1.7
RPL4-216ENST00000569438 RIMBP3BA6NNM3 1639 aa25.68■■□□□ 1.7
RPL4-216ENST00000569438 RIMBP3Q9UFD9 1639 aa25.68■■□□□ 1.7
RPL4-216ENST00000569438 CHD1O14646 1710 aa25.67■■□□□ 1.7
RPL4-216ENST00000569438 ARHGEF11O15085 1522 aa25.65■■□□□ 1.7
RPL4-216ENST00000569438 SNAPC4Q5SXM2 1469 aa25.58■■□□□ 1.69
RPL4-216ENST00000569438 GRIN2BQ13224 1484 aa25.57■■□□□ 1.68
RPL4-216ENST00000569438 MAGI1Q96QZ7 1491 aaPredicted RBP25.56■■□□□ 1.68
RPL4-216ENST00000569438 CHMP7Q8WUX9 453 aaPredicted RBP25.55■■□□□ 1.68
RPL4-216ENST00000569438 GAPVD1Q14C86 1478 aa25.5■■□□□ 1.67
RPL4-216ENST00000569438 CYB5RLQ6IPT4 315 aa25.5■■□□□ 1.67
RPL4-216ENST00000569438 ABCA10Q8WWZ4 1543 aa25.48■■□□□ 1.67
RPL4-216ENST00000569438 SYNJ2O15056 1496 aa25.47■■□□□ 1.67
RPL4-216ENST00000569438 WRNQ14191 1432 aaPredicted RBP eCLIP25.46■■□□□ 1.67
RPL4-216ENST00000569438 SYNJ1O43426 1573 aa25.44■■□□□ 1.66
RPL4-216ENST00000569438 PBRM1Q86U86 1689 aa25.42■■□□□ 1.66
RPL4-216ENST00000569438 ABCA5Q8WWZ7 1642 aa25.41■■□□□ 1.66
RPL4-216ENST00000569438 CLASP1Q7Z460 1538 aa25.4■■□□□ 1.66
RPL4-216ENST00000569438 TOP2BQ02880 1626 aa25.39■■□□□ 1.66
RPL4-216ENST00000569438 ARAP1Q96P48 1450 aa25.38■■□□□ 1.65
RPL4-216ENST00000569438 BIVM-ERCC5R4GMW8 1640 aa25.37■■□□□ 1.65
RPL4-216ENST00000569438 GRIN2AQ12879 1464 aa25.23■■□□□ 1.63
RPL4-216ENST00000569438 ADAMTS12P58397 1594 aa25.2■■□□□ 1.62
RPL4-216ENST00000569438 FHAD1B1AJZ9 1412 aa25.19■■□□□ 1.62
RPL4-216ENST00000569438 ERICH3Q5RHP9 1530 aa25.18■■□□□ 1.62
RPL4-216ENST00000569438 TRHP20396 242 aaPredicted RBP25.18■■□□□ 1.62
RPL4-216ENST00000569438 NUP160Q12769 1436 aa25.13■■□□□ 1.61
RPL4-216ENST00000569438 CEP170Q5SW79 1584 aa25.1■■□□□ 1.61
RPL4-216ENST00000569438 SHROOM2Q13796 1616 aa24.98■■□□□ 1.59
RPL4-216ENST00000569438 ERCC6L2Q5T890 1561 aa24.97■■□□□ 1.59
RPL4-216ENST00000569438 KIF27Q86VH2 1401 aa24.95■■□□□ 1.59
RPL4-216ENST00000569438 JPH4Q96JJ6 628 aa24.92■■□□□ 1.58
RPL4-216ENST00000569438 PRG4Q92954 1404 aaPredicted RBP24.9■■□□□ 1.58
RPL4-216ENST00000569438 IGF1RP08069 1367 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms