RNA–Protein interactions for RNA: ENST00000522411.5

LSS-211, Transcript of lanosterol synthase, humanhuman

TSL 2 BASIC

Gene LSS, Length 2,523 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-211ENST00000522411 NISCHQ9Y2I1 1504 aa29.13■■■□□ 2.25
LSS-211ENST00000522411 CCDC180Q9P1Z9 1646 aa25.27■■□□□ 1.64
LSS-211ENST00000522411 SHROOM4Q9ULL8 1493 aa25.03■■□□□ 1.6
LSS-211ENST00000522411 SUPT5HO00267 1087 aaKnown RBP24.69■■□□□ 1.54
LSS-211ENST00000522411 ZCCHC6Q5VYS8 1495 aaKnown RBP24.64■■□□□ 1.53
LSS-211ENST00000522411 DCAF8L2P0C7V8 631 aa24.61■■□□□ 1.53
LSS-211ENST00000522411 ABCC9O60706 1549 aa24.49■■□□□ 1.51
LSS-211ENST00000522411 CHIC1Q5VXU3 224 aa24.08■■□□□ 1.45
LSS-211ENST00000522411 MYO15BQ96JP2 1530 aa24.06■■□□□ 1.44
LSS-211ENST00000522411 DCAF1Q9Y4B6 1507 aa23.89■■□□□ 1.41
LSS-211ENST00000522411 HRCP23327 699 aa23.82■■□□□ 1.4
LSS-211ENST00000522411 PCGF6Q9BYE7 350 aa23.7■■□□□ 1.38
LSS-211ENST00000522411 NACADO15069 1562 aa23.66■■□□□ 1.38
LSS-211ENST00000522411 RB1CC1Q8TDY2 1594 aa23.55■■□□□ 1.36
LSS-211ENST00000522411 SCRIBQ14160 1630 aa23.54■■□□□ 1.36
LSS-211ENST00000522411 LOC105371045A0A1W2PR82 267 aa23.48■■□□□ 1.35
LSS-211ENST00000522411 PPARGC1BQ86YN6 1023 aaKnown RBP23.41■■□□□ 1.34
LSS-211ENST00000522411 PABPN1Q86U42 306 aaKnown RBP eCLIP23.22■■□□□ 1.31
LSS-211ENST00000522411 UNC13AQ9UPW8 1703 aa23.15■■□□□ 1.3
LSS-211ENST00000522411 TRIM26Q12899 539 aaPredicted RBP23.09■■□□□ 1.29
LSS-211ENST00000522411 RSF1Q96T23 1441 aaPredicted RBP23.03■■□□□ 1.28
LSS-211ENST00000522411 BICRAQ9NZM4 1560 aa22.94■■□□□ 1.26
LSS-211ENST00000522411 TRIM41Q8WV44 630 aa22.91■■□□□ 1.26
LSS-211ENST00000522411 CECR2Q9BXF3 1484 aa22.84■■□□□ 1.25
LSS-211ENST00000522411 FAM9AQ8IZU1 332 aaPredicted RBP22.84■■□□□ 1.25
LSS-211ENST00000522411 EHMT2Q96KQ7 1210 aa22.72■■□□□ 1.23
LSS-211ENST00000522411 ZEB1P37275 1124 aaPredicted RBP22.65■■□□□ 1.22
LSS-211ENST00000522411 MROH2BQ7Z745 1585 aa22.65■■□□□ 1.22
LSS-211ENST00000522411 WIZO95785 1651 aa22.56■■□□□ 1.2
LSS-211ENST00000522411 BAZ1AQ9NRL2 1556 aaPredicted RBP22.45■■□□□ 1.18
LSS-211ENST00000522411 SMARCA4P51532 1647 aa22.41■■□□□ 1.18
LSS-211ENST00000522411 EIF4G1Q04637 1599 aaKnown RBP22.27■■□□□ 1.16
LSS-211ENST00000522411 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.2■■□□□ 1.14
LSS-211ENST00000522411 SCAF1Q9H7N4 1312 aaKnown RBP22.19■■□□□ 1.14
LSS-211ENST00000522411 TOP2AP11388 1531 aaKnown RBP22.17■■□□□ 1.14
LSS-211ENST00000522411 ATAD2BQ9ULI0 1458 aa22.15■■□□□ 1.14
LSS-211ENST00000522411 CCER1Q8TC90 406 aaPredicted RBP22.12■■□□□ 1.13
LSS-211ENST00000522411 CCDC88BA6NC98 1476 aa22.07■■□□□ 1.12
LSS-211ENST00000522411 SMARCA2P51531 1590 aa22.07■■□□□ 1.12
LSS-211ENST00000522411 ABCC8Q09428 1581 aa22.04■■□□□ 1.12
LSS-211ENST00000522411 TTBK1Q5TCY1 1321 aaPredicted RBP22.04■■□□□ 1.12
LSS-211ENST00000522411 CC2D2AQ9P2K1 1620 aa22.02■■□□□ 1.12
LSS-211ENST00000522411 PEG3Q9GZU2 1588 aa22.02■■□□□ 1.11
LSS-211ENST00000522411 BAZ1BQ9UIG0 1483 aaKnown RBP22.01■■□□□ 1.11
LSS-211ENST00000522411 DNAJC5BQ9UF47 199 aa21.94■■□□□ 1.1
LSS-211ENST00000522411 PELP1Q8IZL8 1130 aaKnown RBP21.92■■□□□ 1.1
LSS-211ENST00000522411 NCAPD3P42695 1498 aa21.92■■□□□ 1.1
LSS-211ENST00000522411 SOGA1O94964 1423 aa21.91■■□□□ 1.1
LSS-211ENST00000522411 CEP162Q5TB80 1403 aa21.9■■□□□ 1.1
LSS-211ENST00000522411 WRNQ14191 1432 aaPredicted RBP eCLIP21.89■■□□□ 1.1
LSS-211ENST00000522411 DIEXFQ68CQ4 756 aaKnown RBP21.84■■□□□ 1.09
LSS-211ENST00000522411 ACIN1Q9UKV3 1341 aaKnown RBP21.84■■□□□ 1.09
LSS-211ENST00000522411 NEUROD1Q13562 356 aa21.83■■□□□ 1.09
LSS-211ENST00000522411 TNIKQ9UKE5 1360 aa21.82■■□□□ 1.08
LSS-211ENST00000522411 UBTFP17480 764 aaKnown RBP21.81■■□□□ 1.08
LSS-211ENST00000522411 CSRNP3Q8WYN3 585 aa21.81■■□□□ 1.08
LSS-211ENST00000522411 RUSC2Q8N2Y8 1516 aa21.81■■□□□ 1.08
LSS-211ENST00000522411 HMGXB3Q12766 1538 aa21.78■■□□□ 1.08
LSS-211ENST00000522411 EEA1Q15075 1411 aa21.7■■□□□ 1.06
LSS-211ENST00000522411 GTF3C3Q9Y5Q9 886 aa21.64■■□□□ 1.06
LSS-211ENST00000522411 CENPBP07199 599 aaPredicted RBP21.63■■□□□ 1.05
LSS-211ENST00000522411 GOLGA3Q08378 1498 aa21.62■■□□□ 1.05
LSS-211ENST00000522411 ZNF316A6NFI3 1004 aaPredicted RBP21.58■■□□□ 1.05
LSS-211ENST00000522411 SYNJ1O43426 1573 aa21.57■■□□□ 1.04
LSS-211ENST00000522411 HNRNPUL2Q1KMD3 747 aaKnown RBP21.54■■□□□ 1.04
LSS-211ENST00000522411 CEP164Q9UPV0 1460 aa21.46■■□□□ 1.03
LSS-211ENST00000522411 NESP48681 1621 aa21.46■■□□□ 1.03
LSS-211ENST00000522411 CLIP1P30622 1438 aa21.43■■□□□ 1.02
LSS-211ENST00000522411 CADPSQ9ULU8 1353 aa21.43■■□□□ 1.02
LSS-211ENST00000522411 YTHDC1Q96MU7 727 aaKnown RBP21.42■■□□□ 1.02
LSS-211ENST00000522411 KIF21BO75037 1637 aa21.41■■□□□ 1.02
LSS-211ENST00000522411 CFTRP13569 1480 aa21.41■■□□□ 1.02
LSS-211ENST00000522411 RANGAP1P46060 587 aaPredicted RBP21.4■■□□□ 1.02
LSS-211ENST00000522411 MIER1Q8N108 512 aa21.36■■□□□ 1.01
LSS-211ENST00000522411 VPS8Q8N3P4 1428 aa21.35■■□□□ 1.01
LSS-211ENST00000522411 APLP2Q06481 763 aa21.34■■□□□ 1.01
LSS-211ENST00000522411 RAPGEF2Q9Y4G8 1499 aa21.33■■□□□ 1.01
LSS-211ENST00000522411 TOP2BQ02880 1626 aa21.29■■□□□ 1
LSS-211ENST00000522411 BIVM-ERCC5R4GMW8 1640 aa21.23■□□□□ 0.99
LSS-211ENST00000522411 FANCD2Q9BXW9 1451 aa21.2■□□□□ 0.99
LSS-211ENST00000522411 LAMC3Q9Y6N6 1575 aa21.15■□□□□ 0.98
LSS-211ENST00000522411 CUX1P39880 1505 aa21.12■□□□□ 0.97
LSS-211ENST00000522411 PRDM2Q13029 1718 aa21.11■□□□□ 0.97
LSS-211ENST00000522411 KANK4Q5T7N3 995 aaPredicted RBP21.08■□□□□ 0.97
LSS-211ENST00000522411 PDS5BQ9NTI5 1447 aa21.08■□□□□ 0.96
LSS-211ENST00000522411 PRXQ9BXM0 1461 aa21.06■□□□□ 0.96
LSS-211ENST00000522411 ERICH3Q5RHP9 1530 aa21.06■□□□□ 0.96
LSS-211ENST00000522411 DHX57Q6P158 1386 aaKnown RBP21.06■□□□□ 0.96
LSS-211ENST00000522411 KIF21AQ7Z4S6 1674 aa21.04■□□□□ 0.96
LSS-211ENST00000522411 ARAP1Q96P48 1450 aa21.03■□□□□ 0.96
LSS-211ENST00000522411 CLSPNQ9HAW4 1339 aa21.01■□□□□ 0.95
LSS-211ENST00000522411 URB2Q14146 1524 aaKnown RBP20.97■□□□□ 0.95
LSS-211ENST00000522411 KIF27Q86VH2 1401 aa20.94■□□□□ 0.94
LSS-211ENST00000522411 ERCC6Q03468 1493 aa20.94■□□□□ 0.94
LSS-211ENST00000522411 TOPBP1Q92547 1522 aa20.94■□□□□ 0.94
LSS-211ENST00000522411 FGD5Q6ZNL6 1462 aa20.93■□□□□ 0.94
LSS-211ENST00000522411 RAD54L2Q9Y4B4 1467 aa20.9■□□□□ 0.94
LSS-211ENST00000522411 RRBP1Q9P2E9 1410 aaKnown RBP20.89■□□□□ 0.93
LSS-211ENST00000522411 ITGAEP38570 1179 aa20.88■□□□□ 0.93
LSS-211ENST00000522411 DNMBPQ6XZF7 1577 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms