RNA–Protein interactions for RNA: ENST00000380486.3

C2CD2-202, Transcript of C2 calcium dependent domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2CD2, Length 6,345 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD2-202ENST00000380486 DCAF8L2P0C7V8 631 aa33.21■■■□□ 2.91
C2CD2-202ENST00000380486 SUPT5HO00267 1087 aaKnown RBP31.56■■■□□ 2.64
C2CD2-202ENST00000380486 EHMT2Q96KQ7 1210 aa31.52■■■□□ 2.64
C2CD2-202ENST00000380486 SHROOM4Q9ULL8 1493 aa30.9■■■□□ 2.54
C2CD2-202ENST00000380486 PELP1Q8IZL8 1130 aaKnown RBP30.65■■■□□ 2.5
C2CD2-202ENST00000380486 TTBK1Q5TCY1 1321 aaPredicted RBP30.45■■■□□ 2.47
C2CD2-202ENST00000380486 FAM9AQ8IZU1 332 aaPredicted RBP30.05■■■□□ 2.4
C2CD2-202ENST00000380486 APLP2Q06481 763 aa30.01■■■□□ 2.4
C2CD2-202ENST00000380486 PCGF6Q9BYE7 350 aa29.94■■■□□ 2.38
C2CD2-202ENST00000380486 ERICH6Q7L0X2 663 aa29.94■■■□□ 2.38
C2CD2-202ENST00000380486 RANGAP1P46060 587 aaPredicted RBP29.81■■■□□ 2.36
C2CD2-202ENST00000380486 YTHDC1Q96MU7 727 aaKnown RBP29.48■■■□□ 2.31
C2CD2-202ENST00000380486 CENPBP07199 599 aaPredicted RBP29.44■■■□□ 2.3
C2CD2-202ENST00000380486 NISCHQ9Y2I1 1504 aa29.39■■■□□ 2.3
C2CD2-202ENST00000380486 CCER1Q8TC90 406 aaPredicted RBP29.37■■■□□ 2.29
C2CD2-202ENST00000380486 ATP1B4Q9UN42 357 aaPredicted RBP29.36■■■□□ 2.29
C2CD2-202ENST00000380486 MYT1Q01538 1121 aa29.12■■■□□ 2.25
C2CD2-202ENST00000380486 PPARGC1BQ86YN6 1023 aaKnown RBP29.05■■■□□ 2.24
C2CD2-202ENST00000380486 NEFLP07196 543 aa28.96■■■□□ 2.23
C2CD2-202ENST00000380486 ZEB1P37275 1124 aaPredicted RBP28.9■■■□□ 2.22
C2CD2-202ENST00000380486 TRIM41Q8WV44 630 aa28.85■■■□□ 2.21
C2CD2-202ENST00000380486 UBTFP17480 764 aaKnown RBP28.77■■■□□ 2.2
C2CD2-202ENST00000380486 CNGB1Q14028 1251 aaPredicted RBP28.56■■■□□ 2.16
C2CD2-202ENST00000380486 POLR3GLQ9BT43 218 aa28.54■■■□□ 2.16
C2CD2-202ENST00000380486 MYT1LQ9UL68 1186 aa28.53■■■□□ 2.16
C2CD2-202ENST00000380486 ITGAEP38570 1179 aa28.39■■■□□ 2.14
C2CD2-202ENST00000380486 DAXXQ9UER7 740 aaPredicted RBP28.38■■■□□ 2.13
C2CD2-202ENST00000380486 CHIC1Q5VXU3 224 aa28.27■■■□□ 2.12
C2CD2-202ENST00000380486 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.12■■■□□ 2.09
C2CD2-202ENST00000380486 HNRNPUL2Q1KMD3 747 aaKnown RBP28.12■■■□□ 2.09
C2CD2-202ENST00000380486 HRCP23327 699 aa28.12■■■□□ 2.09
C2CD2-202ENST00000380486 TRIM26Q12899 539 aaPredicted RBP28.07■■■□□ 2.08
C2CD2-202ENST00000380486 LOC105371045A0A1W2PR82 267 aa27.94■■■□□ 2.06
C2CD2-202ENST00000380486 SLC4A1APQ9BWU0 796 aaKnown RBP27.93■■■□□ 2.06
C2CD2-202ENST00000380486 ZNF316A6NFI3 1004 aaPredicted RBP27.79■■■□□ 2.04
C2CD2-202ENST00000380486 CLSPNQ9HAW4 1339 aa27.74■■■□□ 2.03
C2CD2-202ENST00000380486 BCANQ96GW7 911 aa27.73■■■□□ 2.03
C2CD2-202ENST00000380486 RTL5Q5HYW3 569 aaPredicted RBP27.71■■■□□ 2.03
C2CD2-202ENST00000380486 DIEXFQ68CQ4 756 aaKnown RBP27.56■■■□□ 2
C2CD2-202ENST00000380486 BCL11AQ9H165 835 aa27.46■■□□□ 1.99
C2CD2-202ENST00000380486 NEUROD1Q13562 356 aa27.38■■□□□ 1.97
C2CD2-202ENST00000380486 GTF3C3Q9Y5Q9 886 aa27.34■■□□□ 1.97
C2CD2-202ENST00000380486 FAM50AQ14320 339 aaKnown RBP27.34■■□□□ 1.97
C2CD2-202ENST00000380486 TRIM52Q96A61 297 aa27.24■■□□□ 1.95
C2CD2-202ENST00000380486 ZNF326Q5BKZ1 582 aaKnown RBP27.19■■□□□ 1.94
C2CD2-202ENST00000380486 SLC24A1O60721 1099 aa27.12■■□□□ 1.93
C2CD2-202ENST00000380486 CDK11AQ9UQ88 783 aaPredicted RBP27.05■■□□□ 1.92
C2CD2-202ENST00000380486 NPM2Q86SE8 214 aaKnown RBP26.94■■□□□ 1.9
C2CD2-202ENST00000380486 ANP32CO43423 234 aa26.94■■□□□ 1.9
C2CD2-202ENST00000380486 CANXP27824 592 aaKnown RBP26.91■■□□□ 1.9
C2CD2-202ENST00000380486 ZBTB47Q9UFB7 747 aaPredicted RBP26.91■■□□□ 1.9
C2CD2-202ENST00000380486 FBLN2P98095 1184 aa26.87■■□□□ 1.89
C2CD2-202ENST00000380486 EIF5BO60841 1220 aaKnown RBP26.76■■□□□ 1.87
C2CD2-202ENST00000380486 PLPPR3Q6T4P5 718 aa26.74■■□□□ 1.87
C2CD2-202ENST00000380486 ARID3CA6NKF2 412 aa26.72■■□□□ 1.87
C2CD2-202ENST00000380486 ANP32AP39687 249 aaKnown RBP26.62■■□□□ 1.85
C2CD2-202ENST00000380486 PABPN1Q86U42 306 aaKnown RBP eCLIP26.58■■□□□ 1.85
C2CD2-202ENST00000380486 ACIN1Q9UKV3 1341 aaKnown RBP26.57■■□□□ 1.84
C2CD2-202ENST00000380486 P3H3Q8IVL6 736 aa26.54■■□□□ 1.84
C2CD2-202ENST00000380486 ARXQ96QS3 562 aa26.52■■□□□ 1.84
C2CD2-202ENST00000380486 FKBP8Q14318 412 aa26.51■■□□□ 1.83
C2CD2-202ENST00000380486 NBR1Q14596 966 aa26.45■■□□□ 1.82
C2CD2-202ENST00000380486 SALL2Q9Y467 1007 aaPredicted RBP26.44■■□□□ 1.82
C2CD2-202ENST00000380486 NEFMP07197 916 aa26.38■■□□□ 1.81
C2CD2-202ENST00000380486 ESF1Q9H501 851 aaKnown RBP26.35■■□□□ 1.81
C2CD2-202ENST00000380486 ZNF777Q9ULD5 760 aaPredicted RBP26.35■■□□□ 1.81
C2CD2-202ENST00000380486 HSP90AA1P07900 732 aaKnown RBP26.34■■□□□ 1.81
C2CD2-202ENST00000380486 FAM9BQ8IZU0 186 aa26.29■■□□□ 1.8
C2CD2-202ENST00000380486 ANP32BQ92688 251 aaKnown RBP26.25■■□□□ 1.79
C2CD2-202ENST00000380486 HNRNPUQ00839 825 aaKnown RBP eCLIP26.21■■□□□ 1.79
C2CD2-202ENST00000380486 STAG3Q9UJ98 1225 aa26.2■■□□□ 1.78
C2CD2-202ENST00000380486 IRX6P78412 446 aaPredicted RBP26.18■■□□□ 1.78
C2CD2-202ENST00000380486 CHGAP10645 457 aaKnown RBP26.16■■□□□ 1.78
C2CD2-202ENST00000380486 DDX10Q13206 875 aaKnown RBP26.14■■□□□ 1.77
C2CD2-202ENST00000380486 ABCC9O60706 1549 aa26.13■■□□□ 1.77
C2CD2-202ENST00000380486 SCAF1Q9H7N4 1312 aaKnown RBP26.11■■□□□ 1.77
C2CD2-202ENST00000380486 A0A0G2JS52 829 aa26.1■■□□□ 1.77
C2CD2-202ENST00000380486 UPF2Q9HAU5 1272 aaKnown RBP26.03■■□□□ 1.76
C2CD2-202ENST00000380486 SENP3Q9H4L4 574 aaPredicted RBP26.02■■□□□ 1.76
C2CD2-202ENST00000380486 SENP3-EIF4A1A0A087X0R7 540 aa25.97■■□□□ 1.75
C2CD2-202ENST00000380486 CCDC136Q96JN2 1154 aa25.97■■□□□ 1.75
C2CD2-202ENST00000380486 PLEKHG5O94827 1062 aa25.96■■□□□ 1.75
C2CD2-202ENST00000380486 HIRIP3Q9BW71 556 aaPredicted RBP25.96■■□□□ 1.75
C2CD2-202ENST00000380486 TONSLQ96HA7 1378 aa25.92■■□□□ 1.74
C2CD2-202ENST00000380486 GLIPR1L2Q4G1C9 344 aa25.91■■□□□ 1.74
C2CD2-202ENST00000380486 CHIC2Q9UKJ5 165 aa25.86■■□□□ 1.73
C2CD2-202ENST00000380486 NPM1P06748 294 aaKnown RBP eCLIP25.85■■□□□ 1.73
C2CD2-202ENST00000380486 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.85■■□□□ 1.736e-6■□□□□ 8.2
C2CD2-202ENST00000380486 ZBTB7CA1YPR0 619 aa25.82■■□□□ 1.72
C2CD2-202ENST00000380486 TPRNQ4KMQ1 711 aa25.82■■□□□ 1.72
C2CD2-202ENST00000380486 TMC1Q8TDI8 760 aa25.81■■□□□ 1.72
C2CD2-202ENST00000380486 KDM2AQ9Y2K7 1162 aa25.8■■□□□ 1.72
C2CD2-202ENST00000380486 CSRNP3Q8WYN3 585 aa25.74■■□□□ 1.71
C2CD2-202ENST00000380486 WDR43Q15061 677 aaKnown RBP eCLIP25.73■■□□□ 1.71
C2CD2-202ENST00000380486 MIER1Q8N108 512 aa25.72■■□□□ 1.71
C2CD2-202ENST00000380486 MRS2Q9HD23 443 aa25.71■■□□□ 1.71
C2CD2-202ENST00000380486 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.71■■□□□ 1.71
C2CD2-202ENST00000380486 RTN4Q9NQC3 1192 aaKnown RBP25.64■■□□□ 1.69
C2CD2-202ENST00000380486 C14orf37Q86TY3 774 aa25.62■■□□□ 1.69
C2CD2-202ENST00000380486 NCLP19338 710 aaKnown RBP25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms