RNA–Protein interactions for RNA: ENST00000635647.1

PTBP1-221, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-221ENST00000635647 NISCHQ9Y2I1 1504 aa28.29■■■□□ 2.12
PTBP1-221ENST00000635647 DCAF8L2P0C7V8 631 aa25.49■■□□□ 1.67
PTBP1-221ENST00000635647 SHROOM4Q9ULL8 1493 aa25.36■■□□□ 1.65
PTBP1-221ENST00000635647 SUPT5HO00267 1087 aaKnown RBP25.17■■□□□ 1.62
PTBP1-221ENST00000635647 EHMT2Q96KQ7 1210 aa24.04■■□□□ 1.44
PTBP1-221ENST00000635647 CHIC1Q5VXU3 224 aa23.84■■□□□ 1.41
PTBP1-221ENST00000635647 ZCCHC6Q5VYS8 1495 aaKnown RBP23.82■■□□□ 1.4
PTBP1-221ENST00000635647 PCGF6Q9BYE7 350 aa23.74■■□□□ 1.39
PTBP1-221ENST00000635647 FAM9AQ8IZU1 332 aaPredicted RBP23.59■■□□□ 1.37
PTBP1-221ENST00000635647 CCDC180Q9P1Z9 1646 aa23.52■■□□□ 1.36
PTBP1-221ENST00000635647 LOC105371045A0A1W2PR82 267 aa23.5■■□□□ 1.35
PTBP1-221ENST00000635647 MYO15BQ96JP2 1530 aa23.5■■□□□ 1.35
PTBP1-221ENST00000635647 HRCP23327 699 aa23.39■■□□□ 1.34
PTBP1-221ENST00000635647 PPARGC1BQ86YN6 1023 aaKnown RBP23.28■■□□□ 1.32
PTBP1-221ENST00000635647 TTBK1Q5TCY1 1321 aaPredicted RBP23.16■■□□□ 1.3
PTBP1-221ENST00000635647 TRIM41Q8WV44 630 aa23.09■■□□□ 1.29
PTBP1-221ENST00000635647 TRIM26Q12899 539 aaPredicted RBP22.88■■□□□ 1.25
PTBP1-221ENST00000635647 SCRIBQ14160 1630 aa22.81■■□□□ 1.24
PTBP1-221ENST00000635647 DCAF1Q9Y4B6 1507 aa22.76■■□□□ 1.23
PTBP1-221ENST00000635647 ABCC9O60706 1549 aa22.72■■□□□ 1.23
PTBP1-221ENST00000635647 PELP1Q8IZL8 1130 aaKnown RBP22.72■■□□□ 1.23
PTBP1-221ENST00000635647 RANGAP1P46060 587 aaPredicted RBP22.64■■□□□ 1.21
PTBP1-221ENST00000635647 RSF1Q96T23 1441 aaPredicted RBP22.63■■□□□ 1.21
PTBP1-221ENST00000635647 ZEB1P37275 1124 aaPredicted RBP22.42■■□□□ 1.18
PTBP1-221ENST00000635647 RB1CC1Q8TDY2 1594 aa22.36■■□□□ 1.17
PTBP1-221ENST00000635647 CCER1Q8TC90 406 aaPredicted RBP22.35■■□□□ 1.17
PTBP1-221ENST00000635647 CECR2Q9BXF3 1484 aa22.34■■□□□ 1.17
PTBP1-221ENST00000635647 UBTFP17480 764 aaKnown RBP22.3■■□□□ 1.16
PTBP1-221ENST00000635647 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.28■■□□□ 1.16
PTBP1-221ENST00000635647 PABPN1Q86U42 306 aaKnown RBP eCLIP22.21■■□□□ 1.152e-11■□□□□ 9.4
PTBP1-221ENST00000635647 SCAF1Q9H7N4 1312 aaKnown RBP22.18■■□□□ 1.14
PTBP1-221ENST00000635647 MROH2BQ7Z745 1585 aa22.15■■□□□ 1.14
PTBP1-221ENST00000635647 NACADO15069 1562 aa22.02■■□□□ 1.11
PTBP1-221ENST00000635647 WIZO95785 1651 aa22■■□□□ 1.11
PTBP1-221ENST00000635647 APLP2Q06481 763 aa21.98■■□□□ 1.11
PTBP1-221ENST00000635647 YTHDC1Q96MU7 727 aaKnown RBP21.96■■□□□ 1.11
PTBP1-221ENST00000635647 HNRNPUL2Q1KMD3 747 aaKnown RBP21.93■■□□□ 1.1
PTBP1-221ENST00000635647 MYT1Q01538 1121 aa21.85■■□□□ 1.09
PTBP1-221ENST00000635647 GTF3C3Q9Y5Q9 886 aa21.81■■□□□ 1.08
PTBP1-221ENST00000635647 CSRNP3Q8WYN3 585 aa21.79■■□□□ 1.08
PTBP1-221ENST00000635647 ABCC8Q09428 1581 aa21.79■■□□□ 1.08
PTBP1-221ENST00000635647 CENPBP07199 599 aaPredicted RBP21.76■■□□□ 1.07
PTBP1-221ENST00000635647 DIEXFQ68CQ4 756 aaKnown RBP21.75■■□□□ 1.07
PTBP1-221ENST00000635647 BAZ1AQ9NRL2 1556 aaPredicted RBP21.74■■□□□ 1.07
PTBP1-221ENST00000635647 CCDC88BA6NC98 1476 aa21.73■■□□□ 1.07
PTBP1-221ENST00000635647 ATP1B4Q9UN42 357 aaPredicted RBP21.73■■□□□ 1.07
PTBP1-221ENST00000635647 ITGAEP38570 1179 aa21.71■■□□□ 1.07
PTBP1-221ENST00000635647 SOGA1O94964 1423 aa21.71■■□□□ 1.07
PTBP1-221ENST00000635647 NEUROD1Q13562 356 aa21.68■■□□□ 1.06
PTBP1-221ENST00000635647 CEP162Q5TB80 1403 aa21.65■■□□□ 1.06
PTBP1-221ENST00000635647 ACIN1Q9UKV3 1341 aaKnown RBP21.64■■□□□ 1.05
PTBP1-221ENST00000635647 RUSC2Q8N2Y8 1516 aa21.54■■□□□ 1.04
PTBP1-221ENST00000635647 TOP2AP11388 1531 aaKnown RBP21.49■■□□□ 1.03
PTBP1-221ENST00000635647 TNIKQ9UKE5 1360 aa21.47■■□□□ 1.03
PTBP1-221ENST00000635647 SMARCA4P51532 1647 aa21.45■■□□□ 1.02
PTBP1-221ENST00000635647 WRNQ14191 1432 aaPredicted RBP eCLIP21.43■■□□□ 1.023e-6■■■■□ 19.3
PTBP1-221ENST00000635647 ZNF316A6NFI3 1004 aaPredicted RBP21.41■■□□□ 1.02
PTBP1-221ENST00000635647 SMARCA2P51531 1590 aa21.4■■□□□ 1.02
PTBP1-221ENST00000635647 GOLGA3Q08378 1498 aa21.36■■□□□ 1.01
PTBP1-221ENST00000635647 CLIP1P30622 1438 aa21.31■■□□□ 1
PTBP1-221ENST00000635647 EEA1Q15075 1411 aa21.31■■□□□ 1
PTBP1-221ENST00000635647 MIER1Q8N108 512 aa21.21■□□□□ 0.99
PTBP1-221ENST00000635647 EIF4G1Q04637 1599 aaKnown RBP21.2■□□□□ 0.98
PTBP1-221ENST00000635647 P3H3Q8IVL6 736 aa21.19■□□□□ 0.98
PTBP1-221ENST00000635647 BAZ1BQ9UIG0 1483 aaKnown RBP21.19■□□□□ 0.98
PTBP1-221ENST00000635647 CEP164Q9UPV0 1460 aa21.18■□□□□ 0.98
PTBP1-221ENST00000635647 RAPGEF2Q9Y4G8 1499 aa21.09■□□□□ 0.97
PTBP1-221ENST00000635647 UNC13AQ9UPW8 1703 aa21.07■□□□□ 0.96
PTBP1-221ENST00000635647 FAM50AQ14320 339 aaKnown RBP21.06■□□□□ 0.96
PTBP1-221ENST00000635647 ATAD2BQ9ULI0 1458 aa21.05■□□□□ 0.96
PTBP1-221ENST00000635647 VPS8Q8N3P4 1428 aa21.03■□□□□ 0.96
PTBP1-221ENST00000635647 SYNJ1O43426 1573 aa21.03■□□□□ 0.96
PTBP1-221ENST00000635647 KANK4Q5T7N3 995 aaPredicted RBP21.01■□□□□ 0.95
PTBP1-221ENST00000635647 CNGB1Q14028 1251 aaPredicted RBP20.99■□□□□ 0.95
PTBP1-221ENST00000635647 BICRAQ9NZM4 1560 aa20.96■□□□□ 0.95
PTBP1-221ENST00000635647 ARID3CA6NKF2 412 aa20.92■□□□□ 0.94
PTBP1-221ENST00000635647 BCANQ96GW7 911 aa20.86■□□□□ 0.93
PTBP1-221ENST00000635647 HIRIP3Q9BW71 556 aaPredicted RBP20.86■□□□□ 0.93
PTBP1-221ENST00000635647 KIF21BO75037 1637 aa20.8■□□□□ 0.92
PTBP1-221ENST00000635647 KIF27Q86VH2 1401 aa20.79■□□□□ 0.92
PTBP1-221ENST00000635647 POLR3GLQ9BT43 218 aa20.71■□□□□ 0.91
PTBP1-221ENST00000635647 DHX57Q6P158 1386 aaKnown RBP20.7■□□□□ 0.9
PTBP1-221ENST00000635647 BCL11AQ9H165 835 aa20.7■□□□□ 0.9
PTBP1-221ENST00000635647 PEG3Q9GZU2 1588 aa20.67■□□□□ 0.9
PTBP1-221ENST00000635647 CCNB3Q8WWL7 1395 aa20.66■□□□□ 0.9
PTBP1-221ENST00000635647 DDX10Q13206 875 aaKnown RBP20.65■□□□□ 0.9
PTBP1-221ENST00000635647 SIN3AQ96ST3 1273 aa20.65■□□□□ 0.9
PTBP1-221ENST00000635647 CUX2O14529 1486 aa20.64■□□□□ 0.9
PTBP1-221ENST00000635647 ARAP1Q96P48 1450 aa20.64■□□□□ 0.89
PTBP1-221ENST00000635647 TOP2BQ02880 1626 aa20.61■□□□□ 0.89
PTBP1-221ENST00000635647 PRXQ9BXM0 1461 aa20.58■□□□□ 0.88
PTBP1-221ENST00000635647 CLSPNQ9HAW4 1339 aa20.58■□□□□ 0.88
PTBP1-221ENST00000635647 TRIM52Q96A61 297 aa20.57■□□□□ 0.88
PTBP1-221ENST00000635647 CARMIL1Q5VZK9 1371 aa20.56■□□□□ 0.88
PTBP1-221ENST00000635647 CUX1P39880 1505 aa20.55■□□□□ 0.88
PTBP1-221ENST00000635647 KCNH8Q96L42 1107 aa20.54■□□□□ 0.88
PTBP1-221ENST00000635647 NEFLP07196 543 aa20.54■□□□□ 0.88
PTBP1-221ENST00000635647 RAB3GAP2Q9H2M9 1393 aa20.53■□□□□ 0.88
PTBP1-221ENST00000635647 ERICH6Q7L0X2 663 aa20.53■□□□□ 0.88
PTBP1-221ENST00000635647 CHIC2Q9UKJ5 165 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms