RNA–Protein interactions for RNA: ENST00000567536.5

SH2B1-212, Transcript of SH2B adaptor protein 1, humanhuman

TSL 3

Gene SH2B1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B1-212ENST00000567536 NISCHQ9Y2I1 1504 aa54.31■■■■■ 6.28
SH2B1-212ENST00000567536 CCDC180Q9P1Z9 1646 aa48.27■■■■■ 5.32
SH2B1-212ENST00000567536 ABCC9O60706 1549 aa47.15■■■■■ 5.14
SH2B1-212ENST00000567536 RB1CC1Q8TDY2 1594 aa45.45■■■■■ 4.87
SH2B1-212ENST00000567536 NACADO15069 1562 aa45.43■■■■■ 4.86
SH2B1-212ENST00000567536 DCAF8L2P0C7V8 631 aa45.42■■■■■ 4.86
SH2B1-212ENST00000567536 MYO15BQ96JP2 1530 aa45.21■■■■■ 4.83
SH2B1-212ENST00000567536 ZCCHC6Q5VYS8 1495 aaKnown RBP45.21■■■■■ 4.83
SH2B1-212ENST00000567536 DCAF1Q9Y4B6 1507 aa45.01■■■■■ 4.8
SH2B1-212ENST00000567536 UNC13AQ9UPW8 1703 aa44.27■■■■■ 4.68
SH2B1-212ENST00000567536 PABPN1Q86U42 306 aaKnown RBP eCLIP44.09■■■■■ 4.65
SH2B1-212ENST00000567536 DNAJC5BQ9UF47 199 aa44.06■■■■■ 4.64
SH2B1-212ENST00000567536 BICRAQ9NZM4 1560 aa43.97■■■■■ 4.63
SH2B1-212ENST00000567536 SCRIBQ14160 1630 aa43.95■■■■■ 4.63
SH2B1-212ENST00000567536 SHROOM4Q9ULL8 1493 aa43.69■■■■■ 4.58
SH2B1-212ENST00000567536 EIF4G1Q04637 1599 aaKnown RBP42.86■■■■■ 4.45
SH2B1-212ENST00000567536 CC2D2AQ9P2K1 1620 aa42.66■■■■■ 4.42
SH2B1-212ENST00000567536 CECR2Q9BXF3 1484 aa42.41■■■■■ 4.38
SH2B1-212ENST00000567536 BAZ1AQ9NRL2 1556 aaPredicted RBP42.12■■■■■ 4.33
SH2B1-212ENST00000567536 SMARCA4P51532 1647 aa42.09■■■■■ 4.33
SH2B1-212ENST00000567536 NCAPD3P42695 1498 aa41.93■■■■■ 4.3
SH2B1-212ENST00000567536 ATAD2BQ9ULI0 1458 aa41.9■■■■■ 4.3
SH2B1-212ENST00000567536 SMARCA2P51531 1590 aa41.89■■■■■ 4.3
SH2B1-212ENST00000567536 MROH2BQ7Z745 1585 aa41.8■■■■■ 4.28
SH2B1-212ENST00000567536 PEG3Q9GZU2 1588 aa41.73■■■■■ 4.27
SH2B1-212ENST00000567536 HMGXB3Q12766 1538 aa41.68■■■■■ 4.26
SH2B1-212ENST00000567536 BAZ1BQ9UIG0 1483 aaKnown RBP41.57■■■■■ 4.25
SH2B1-212ENST00000567536 RSF1Q96T23 1441 aaPredicted RBP41.38■■■■■ 4.22
SH2B1-212ENST00000567536 WIZO95785 1651 aa41.32■■■■■ 4.2
SH2B1-212ENST00000567536 TOP2AP11388 1531 aaKnown RBP40.95■■■■■ 4.15
SH2B1-212ENST00000567536 LAMC3Q9Y6N6 1575 aa40.8■■■■■ 4.12
SH2B1-212ENST00000567536 NESP48681 1621 aa40.77■■■■■ 4.12
SH2B1-212ENST00000567536 CADPSQ9ULU8 1353 aa40.72■■■■■ 4.11
SH2B1-212ENST00000567536 ERCC6Q03468 1493 aa40.7■■■■■ 4.11
SH2B1-212ENST00000567536 DNAJC5Q9H3Z4 198 aa40.64■■■■■ 4.1
SH2B1-212ENST00000567536 PDS5BQ9NTI5 1447 aa40.59■■■■■ 4.09
SH2B1-212ENST00000567536 CCDC88BA6NC98 1476 aa40.47■■■■■ 4.07
SH2B1-212ENST00000567536 CFTRP13569 1480 aa40.45■■■■■ 4.07
SH2B1-212ENST00000567536 SUPT5HO00267 1087 aaKnown RBP40.37■■■■■ 4.05
SH2B1-212ENST00000567536 CUX2O14529 1486 aa40.3■■■■■ 4.04
SH2B1-212ENST00000567536 KIF21AQ7Z4S6 1674 aa40.27■■■■■ 4.04
SH2B1-212ENST00000567536 FANCD2Q9BXW9 1451 aa40.19■■■■■ 4.03
SH2B1-212ENST00000567536 THOC2Q8NI27 1593 aaKnown RBP40.15■■■■■ 4.02
SH2B1-212ENST00000567536 CEP164Q9UPV0 1460 aa40.15■■■■■ 4.02
SH2B1-212ENST00000567536 MRC2Q9UBG0 1479 aa40.08■■■■■ 4.01
SH2B1-212ENST00000567536 PRDM2Q13029 1718 aa40.07■■■■■ 4
SH2B1-212ENST00000567536 WDR62O43379 1518 aa39.92■■■■□ 3.98
SH2B1-212ENST00000567536 URB2Q14146 1524 aaKnown RBP39.73■■■■□ 3.95
SH2B1-212ENST00000567536 ABCC8Q09428 1581 aa39.68■■■■□ 3.94
SH2B1-212ENST00000567536 TOPBP1Q92547 1522 aa39.54■■■■□ 3.92
SH2B1-212ENST00000567536 DNMBPQ6XZF7 1577 aa39.5■■■■□ 3.91
SH2B1-212ENST00000567536 IFT140Q96RY7 1462 aa39.34■■■■□ 3.89
SH2B1-212ENST00000567536 CUX1P39880 1505 aa39.2■■■■□ 3.87
SH2B1-212ENST00000567536 POLA1P09884 1462 aaPredicted RBP39.19■■■■□ 3.86
SH2B1-212ENST00000567536 SOGA1O94964 1423 aa39.11■■■■□ 3.85
SH2B1-212ENST00000567536 FGD5Q6ZNL6 1462 aa39.1■■■■□ 3.85
SH2B1-212ENST00000567536 TARBP1Q13395 1621 aaKnown RBP39.07■■■■□ 3.85
SH2B1-212ENST00000567536 WRNQ14191 1432 aaPredicted RBP eCLIP39.05■■■■□ 3.84
SH2B1-212ENST00000567536 ZNF608Q9ULD9 1512 aaPredicted RBP39.04■■■■□ 3.84
SH2B1-212ENST00000567536 RAD54L2Q9Y4B4 1467 aa38.99■■■■□ 3.83
SH2B1-212ENST00000567536 TOP2BQ02880 1626 aa38.92■■■■□ 3.82
SH2B1-212ENST00000567536 BIVM-ERCC5R4GMW8 1640 aa38.89■■■■□ 3.82
SH2B1-212ENST00000567536 EIF4G3O43432 1585 aaKnown RBP38.89■■■■□ 3.82
SH2B1-212ENST00000567536 AQRO60306 1485 aaKnown RBP eCLIP38.88■■■■□ 3.811e-8■■■□□ 18.8
SH2B1-212ENST00000567536 WDR97A6NE52 1622 aa38.88■■■■□ 3.81
SH2B1-212ENST00000567536 SYNJ1O43426 1573 aa38.84■■■■□ 3.81
SH2B1-212ENST00000567536 TDRD9Q8NDG6 1382 aaKnown RBP38.83■■■■□ 3.81
SH2B1-212ENST00000567536 ABCA10Q8WWZ4 1543 aa38.76■■■■□ 3.8
SH2B1-212ENST00000567536 OSCARQ8IYS5 282 aa38.71■■■■□ 3.79
SH2B1-212ENST00000567536 GRIN2BQ13224 1484 aa38.64■■■■□ 3.78
SH2B1-212ENST00000567536 GAPVD1Q14C86 1478 aa38.63■■■■□ 3.77
SH2B1-212ENST00000567536 TRIM41Q8WV44 630 aa38.56■■■■□ 3.76
SH2B1-212ENST00000567536 ABCA5Q8WWZ7 1642 aa38.54■■■■□ 3.76
SH2B1-212ENST00000567536 MAGI1Q96QZ7 1491 aaPredicted RBP38.54■■■■□ 3.76
SH2B1-212ENST00000567536 SNAPC4Q5SXM2 1469 aa38.5■■■■□ 3.75
SH2B1-212ENST00000567536 FBLN2P98095 1184 aa38.48■■■■□ 3.75
SH2B1-212ENST00000567536 PBRM1Q86U86 1689 aa38.45■■■■□ 3.75
SH2B1-212ENST00000567536 CHMP7Q8WUX9 453 aaPredicted RBP38.43■■■■□ 3.74
SH2B1-212ENST00000567536 CHD1O14646 1710 aa38.38■■■■□ 3.73
SH2B1-212ENST00000567536 SYNJ2O15056 1496 aa38.37■■■■□ 3.73
SH2B1-212ENST00000567536 ERICH3Q5RHP9 1530 aa38.33■■■■□ 3.73
SH2B1-212ENST00000567536 KIF27Q86VH2 1401 aa38.28■■■■□ 3.72
SH2B1-212ENST00000567536 FHAD1B1AJZ9 1412 aa38.21■■■■□ 3.71
SH2B1-212ENST00000567536 ADAMTS12P58397 1594 aa38.16■■■■□ 3.7
SH2B1-212ENST00000567536 GRIN2AQ12879 1464 aa38.1■■■■□ 3.69
SH2B1-212ENST00000567536 IGF1RP08069 1367 aa38.09■■■■□ 3.69
SH2B1-212ENST00000567536 CLASP1Q7Z460 1538 aa38.01■■■■□ 3.67
SH2B1-212ENST00000567536 CUL7Q14999 1698 aa37.96■■■■□ 3.67
SH2B1-212ENST00000567536 NUP160Q12769 1436 aa37.95■■■■□ 3.67
SH2B1-212ENST00000567536 ARHGEF11O15085 1522 aa37.93■■■■□ 3.66
SH2B1-212ENST00000567536 RIMBP3CA6NJZ7 1639 aa37.9■■■■□ 3.66
SH2B1-212ENST00000567536 RIMBP3BA6NNM3 1639 aa37.9■■■■□ 3.66
SH2B1-212ENST00000567536 RIMBP3Q9UFD9 1639 aa37.9■■■■□ 3.66
SH2B1-212ENST00000567536 CARMIL1Q5VZK9 1371 aa37.88■■■■□ 3.65
SH2B1-212ENST00000567536 CEP170Q5SW79 1584 aa37.85■■■■□ 3.65
SH2B1-212ENST00000567536 RUSC2Q8N2Y8 1516 aa37.78■■■■□ 3.64
SH2B1-212ENST00000567536 CHIC1Q5VXU3 224 aa37.71■■■■□ 3.63
SH2B1-212ENST00000567536 CYB5RLQ6IPT4 315 aa37.66■■■■□ 3.62
SH2B1-212ENST00000567536 RAPGEF2Q9Y4G8 1499 aa37.64■■■■□ 3.62
SH2B1-212ENST00000567536 JPH4Q96JJ6 628 aa37.64■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms