RNA–Protein interactions for RNA: ENST00000538335.1

LINC01089-207, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 3 BASIC

Gene LINC01089, Length 630 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-207ENST00000538335 NISCHQ9Y2I1 1504 aa69.78■■■■■ 8.76
LINC01089-207ENST00000538335 CCDC180Q9P1Z9 1646 aa62.43■■■■■ 7.58
LINC01089-207ENST00000538335 ABCC9O60706 1549 aa61.9■■■■■ 7.5
LINC01089-207ENST00000538335 RB1CC1Q8TDY2 1594 aa59.24■■■■■ 7.07
LINC01089-207ENST00000538335 NACADO15069 1562 aa58.96■■■■■ 7.03
LINC01089-207ENST00000538335 DCAF8L2P0C7V8 631 aa58.74■■■■■ 6.99
LINC01089-207ENST00000538335 MYO15BQ96JP2 1530 aa58.34■■■■■ 6.93
LINC01089-207ENST00000538335 ZCCHC6Q5VYS8 1495 aaKnown RBP57.93■■■■■ 6.86
LINC01089-207ENST00000538335 DCAF1Q9Y4B6 1507 aa57.75■■■■■ 6.83
LINC01089-207ENST00000538335 PABPN1Q86U42 306 aaKnown RBP eCLIP57.69■■■■■ 6.83
LINC01089-207ENST00000538335 UNC13AQ9UPW8 1703 aa57.67■■■■■ 6.82
LINC01089-207ENST00000538335 DNAJC5BQ9UF47 199 aa57.52■■■■■ 6.8
LINC01089-207ENST00000538335 BICRAQ9NZM4 1560 aa57.32■■■■■ 6.77
LINC01089-207ENST00000538335 SHROOM4Q9ULL8 1493 aa56.88■■■■■ 6.7
LINC01089-207ENST00000538335 SCRIBQ14160 1630 aa56.84■■■■■ 6.69
LINC01089-207ENST00000538335 EIF4G1Q04637 1599 aaKnown RBP55.96■■■■■ 6.55
LINC01089-207ENST00000538335 CC2D2AQ9P2K1 1620 aa55.94■■■■■ 6.54
LINC01089-207ENST00000538335 CECR2Q9BXF3 1484 aa55.77■■■■■ 6.52
LINC01089-207ENST00000538335 NCAPD3P42695 1498 aa54.4■■■■■ 6.3
LINC01089-207ENST00000538335 SMARCA4P51532 1647 aa54.3■■■■■ 6.28
LINC01089-207ENST00000538335 ATAD2BQ9ULI0 1458 aa54.27■■■■■ 6.28
LINC01089-207ENST00000538335 SMARCA2P51531 1590 aa54.22■■■■■ 6.27
LINC01089-207ENST00000538335 BAZ1AQ9NRL2 1556 aaPredicted RBP54.2■■■■■ 6.27
LINC01089-207ENST00000538335 HMGXB3Q12766 1538 aa54.04■■■■■ 6.24
LINC01089-207ENST00000538335 BAZ1BQ9UIG0 1483 aaKnown RBP53.82■■■■■ 6.21
LINC01089-207ENST00000538335 PEG3Q9GZU2 1588 aa53.81■■■■■ 6.2
LINC01089-207ENST00000538335 MROH2BQ7Z745 1585 aa53.7■■■■■ 6.19
LINC01089-207ENST00000538335 ERCC6Q03468 1493 aa53.54■■■■■ 6.16
LINC01089-207ENST00000538335 CUX2O14529 1486 aa53.28■■■■■ 6.12
LINC01089-207ENST00000538335 NESP48681 1621 aa53.24■■■■■ 6.11
LINC01089-207ENST00000538335 LAMC3Q9Y6N6 1575 aa53.11■■■■■ 6.09
LINC01089-207ENST00000538335 WIZO95785 1651 aa53.05■■■■■ 6.08
LINC01089-207ENST00000538335 PDS5BQ9NTI5 1447 aa52.86■■■■■ 6.05
LINC01089-207ENST00000538335 RSF1Q96T23 1441 aaPredicted RBP52.82■■■■■ 6.05
LINC01089-207ENST00000538335 CADPSQ9ULU8 1353 aa52.79■■■■■ 6.04
LINC01089-207ENST00000538335 THOC2Q8NI27 1593 aaKnown RBP52.64■■■■■ 6.02
LINC01089-207ENST00000538335 DNAJC5Q9H3Z4 198 aa52.64■■■■■ 6.02
LINC01089-207ENST00000538335 KIF21AQ7Z4S6 1674 aa52.57■■■■■ 6.01
LINC01089-207ENST00000538335 TOP2AP11388 1531 aaKnown RBP52.53■■■■■ 6
LINC01089-207ENST00000538335 MRC2Q9UBG0 1479 aa52.3■■■■■ 5.96
LINC01089-207ENST00000538335 CFTRP13569 1480 aa52.26■■■■■ 5.96
LINC01089-207ENST00000538335 CEP164Q9UPV0 1460 aa52.21■■■■■ 5.95
LINC01089-207ENST00000538335 FANCD2Q9BXW9 1451 aa52.16■■■■■ 5.94
LINC01089-207ENST00000538335 WDR62O43379 1518 aa52.11■■■■■ 5.93
LINC01089-207ENST00000538335 CCDC88BA6NC98 1476 aa51.89■■■■■ 5.9
LINC01089-207ENST00000538335 PRDM2Q13029 1718 aa51.71■■■■■ 5.87
LINC01089-207ENST00000538335 URB2Q14146 1524 aaKnown RBP51.62■■■■■ 5.85
LINC01089-207ENST00000538335 ABCC8Q09428 1581 aa51.28■■■■■ 5.8
LINC01089-207ENST00000538335 TOPBP1Q92547 1522 aa51.2■■■■■ 5.79
LINC01089-207ENST00000538335 IFT140Q96RY7 1462 aa51.16■■■■■ 5.78
LINC01089-207ENST00000538335 DNMBPQ6XZF7 1577 aa51.08■■■■■ 5.77
LINC01089-207ENST00000538335 OSCARQ8IYS5 282 aa50.94■■■■■ 5.75
LINC01089-207ENST00000538335 ZNF608Q9ULD9 1512 aaPredicted RBP50.88■■■■■ 5.74
LINC01089-207ENST00000538335 SUPT5HO00267 1087 aaKnown RBP50.87■■■■■ 5.73
LINC01089-207ENST00000538335 POLA1P09884 1462 aaPredicted RBP50.71■■■■■ 5.71
LINC01089-207ENST00000538335 EIF4G3O43432 1585 aaKnown RBP50.67■■■■■ 5.7
LINC01089-207ENST00000538335 TARBP1Q13395 1621 aaKnown RBP50.65■■■■■ 5.7
LINC01089-207ENST00000538335 SOGA1O94964 1423 aa50.53■■■■■ 5.68
LINC01089-207ENST00000538335 AQRO60306 1485 aaKnown RBP eCLIP50.52■■■■■ 5.68
LINC01089-207ENST00000538335 TRIM41Q8WV44 630 aa50.52■■■■■ 5.68
LINC01089-207ENST00000538335 FGD5Q6ZNL6 1462 aa50.46■■■■■ 5.67
LINC01089-207ENST00000538335 RAD54L2Q9Y4B4 1467 aa50.46■■■■■ 5.67
LINC01089-207ENST00000538335 CUX1P39880 1505 aa50.44■■■■■ 5.67
LINC01089-207ENST00000538335 WDR97A6NE52 1622 aa50.34■■■■■ 5.65
LINC01089-207ENST00000538335 TDRD9Q8NDG6 1382 aaKnown RBP50.31■■■■■ 5.64
LINC01089-207ENST00000538335 FBLN2P98095 1184 aa50.2■■■■■ 5.63
LINC01089-207ENST00000538335 CHD1O14646 1710 aa50.15■■■■■ 5.62
LINC01089-207ENST00000538335 RIMBP3CA6NJZ7 1639 aa50.07■■■■■ 5.61
LINC01089-207ENST00000538335 RIMBP3BA6NNM3 1639 aa50.07■■■■■ 5.61
LINC01089-207ENST00000538335 RIMBP3Q9UFD9 1639 aa50.07■■■■■ 5.61
LINC01089-207ENST00000538335 GRIN2BQ13224 1484 aa50.07■■■■■ 5.61
LINC01089-207ENST00000538335 SNAPC4Q5SXM2 1469 aa50.07■■■■■ 5.61
LINC01089-207ENST00000538335 MAGI1Q96QZ7 1491 aaPredicted RBP50.03■■■■■ 5.6
LINC01089-207ENST00000538335 ARHGEF11O15085 1522 aa50.02■■■■■ 5.6
LINC01089-207ENST00000538335 CHMP7Q8WUX9 453 aaPredicted RBP49.96■■■■■ 5.59
LINC01089-207ENST00000538335 ABCA10Q8WWZ4 1543 aa49.95■■■■■ 5.59
LINC01089-207ENST00000538335 GAPVD1Q14C86 1478 aa49.93■■■■■ 5.58
LINC01089-207ENST00000538335 WRNQ14191 1432 aaPredicted RBP eCLIP49.91■■■■■ 5.58
LINC01089-207ENST00000538335 SYNJ2O15056 1496 aa49.83■■■■■ 5.57
LINC01089-207ENST00000538335 TOP2BQ02880 1626 aa49.82■■■■■ 5.57
LINC01089-207ENST00000538335 BIVM-ERCC5R4GMW8 1640 aa49.78■■■■■ 5.56
LINC01089-207ENST00000538335 PBRM1Q86U86 1689 aa49.77■■■■■ 5.56
LINC01089-207ENST00000538335 ABCA5Q8WWZ7 1642 aa49.77■■■■■ 5.56
LINC01089-207ENST00000538335 SYNJ1O43426 1573 aa49.76■■■■■ 5.56
LINC01089-207ENST00000538335 CYB5RLQ6IPT4 315 aa49.66■■■■■ 5.54
LINC01089-207ENST00000538335 CLASP1Q7Z460 1538 aa49.65■■■■■ 5.54
LINC01089-207ENST00000538335 ARAP1Q96P48 1450 aa49.54■■■■■ 5.52
LINC01089-207ENST00000538335 ADAMTS12P58397 1594 aa49.38■■■■■ 5.5
LINC01089-207ENST00000538335 GRIN2AQ12879 1464 aa49.37■■■■■ 5.49
LINC01089-207ENST00000538335 ERICH3Q5RHP9 1530 aa49.36■■■■■ 5.49
LINC01089-207ENST00000538335 FHAD1B1AJZ9 1412 aa49.35■■■■■ 5.49
LINC01089-207ENST00000538335 NUP160Q12769 1436 aa49.19■■■■■ 5.47
LINC01089-207ENST00000538335 CEP170Q5SW79 1584 aa49.1■■■■■ 5.45
LINC01089-207ENST00000538335 TRHP20396 242 aaPredicted RBP49.01■■■■■ 5.44
LINC01089-207ENST00000538335 KIF27Q86VH2 1401 aa48.97■■■■■ 5.43
LINC01089-207ENST00000538335 SHROOM2Q13796 1616 aa48.87■■■■■ 5.41
LINC01089-207ENST00000538335 ERCC6L2Q5T890 1561 aa48.8■■■■■ 5.4
LINC01089-207ENST00000538335 IGF1RP08069 1367 aa48.79■■■■■ 5.4
LINC01089-207ENST00000538335 JPH4Q96JJ6 628 aa48.74■■■■■ 5.39
LINC01089-207ENST00000538335 CUL7Q14999 1698 aa48.73■■■■■ 5.39
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms