RNA–Protein interactions for RNA: ENST00000586944.5

PTBP1-210, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 2

Gene PTBP1, Length 4,661 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-210ENST00000586944 NISCHQ9Y2I1 1504 aa30.93■■■□□ 2.54
PTBP1-210ENST00000586944 DCAF8L2P0C7V8 631 aa30.6■■■□□ 2.49
PTBP1-210ENST00000586944 SUPT5HO00267 1087 aaKnown RBP29.54■■■□□ 2.32
PTBP1-210ENST00000586944 SHROOM4Q9ULL8 1493 aa29.33■■■□□ 2.29
PTBP1-210ENST00000586944 EHMT2Q96KQ7 1210 aa28.28■■■□□ 2.12
PTBP1-210ENST00000586944 FAM9AQ8IZU1 332 aaPredicted RBP27.76■■■□□ 2.03
PTBP1-210ENST00000586944 PCGF6Q9BYE7 350 aa27.61■■■□□ 2.01
PTBP1-210ENST00000586944 TTBK1Q5TCY1 1321 aaPredicted RBP27.29■■□□□ 1.96
PTBP1-210ENST00000586944 TRIM41Q8WV44 630 aa27.26■■□□□ 1.96
PTBP1-210ENST00000586944 APLP2Q06481 763 aa27.08■■□□□ 1.93
PTBP1-210ENST00000586944 RANGAP1P46060 587 aaPredicted RBP26.93■■□□□ 1.9
PTBP1-210ENST00000586944 CHIC1Q5VXU3 224 aa26.84■■□□□ 1.89
PTBP1-210ENST00000586944 LOC105371045A0A1W2PR82 267 aa26.75■■□□□ 1.87
PTBP1-210ENST00000586944 PPARGC1BQ86YN6 1023 aaKnown RBP26.72■■□□□ 1.87
PTBP1-210ENST00000586944 UBTFP17480 764 aaKnown RBP26.69■■□□□ 1.86
PTBP1-210ENST00000586944 CCER1Q8TC90 406 aaPredicted RBP26.66■■□□□ 1.86
PTBP1-210ENST00000586944 ZEB1P37275 1124 aaPredicted RBP26.58■■□□□ 1.85
PTBP1-210ENST00000586944 TRIM26Q12899 539 aaPredicted RBP26.44■■□□□ 1.82
PTBP1-210ENST00000586944 HRCP23327 699 aa26.4■■□□□ 1.82
PTBP1-210ENST00000586944 ATP1B4Q9UN42 357 aaPredicted RBP26.35■■□□□ 1.81
PTBP1-210ENST00000586944 PELP1Q8IZL8 1130 aaKnown RBP26.19■■□□□ 1.78
PTBP1-210ENST00000586944 CENPBP07199 599 aaPredicted RBP26.15■■□□□ 1.78
PTBP1-210ENST00000586944 ABCC9O60706 1549 aa26.14■■□□□ 1.77
PTBP1-210ENST00000586944 YTHDC1Q96MU7 727 aaKnown RBP25.99■■□□□ 1.75
PTBP1-210ENST00000586944 PABPN1Q86U42 306 aaKnown RBP eCLIP25.92■■□□□ 1.74
PTBP1-210ENST00000586944 HNRNPUL2Q1KMD3 747 aaKnown RBP25.87■■□□□ 1.73
PTBP1-210ENST00000586944 ITGAEP38570 1179 aa25.84■■□□□ 1.73
PTBP1-210ENST00000586944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.81■■□□□ 1.72
PTBP1-210ENST00000586944 ZCCHC6Q5VYS8 1495 aaKnown RBP25.72■■□□□ 1.71
PTBP1-210ENST00000586944 SCRIBQ14160 1630 aa25.36■■□□□ 1.65
PTBP1-210ENST00000586944 DIEXFQ68CQ4 756 aaKnown RBP25.36■■□□□ 1.65
PTBP1-210ENST00000586944 NEFLP07196 543 aa25.33■■□□□ 1.65
PTBP1-210ENST00000586944 CSRNP3Q8WYN3 585 aa25.23■■□□□ 1.63
PTBP1-210ENST00000586944 CCDC180Q9P1Z9 1646 aa25.22■■□□□ 1.63
PTBP1-210ENST00000586944 FAM50AQ14320 339 aaKnown RBP25.17■■□□□ 1.62
PTBP1-210ENST00000586944 ERICH6Q7L0X2 663 aa25.17■■□□□ 1.62
PTBP1-210ENST00000586944 POLR3GLQ9BT43 218 aa25.13■■□□□ 1.61
PTBP1-210ENST00000586944 CNGB1Q14028 1251 aaPredicted RBP25.09■■□□□ 1.61
PTBP1-210ENST00000586944 MYO15BQ96JP2 1530 aa25.09■■□□□ 1.61
PTBP1-210ENST00000586944 NEUROD1Q13562 356 aa25■■□□□ 1.59
PTBP1-210ENST00000586944 DCAF1Q9Y4B6 1507 aa24.99■■□□□ 1.59
PTBP1-210ENST00000586944 P3H3Q8IVL6 736 aa24.93■■□□□ 1.58
PTBP1-210ENST00000586944 MYT1LQ9UL68 1186 aa24.89■■□□□ 1.57
PTBP1-210ENST00000586944 RSF1Q96T23 1441 aaPredicted RBP24.88■■□□□ 1.57
PTBP1-210ENST00000586944 ZNF316A6NFI3 1004 aaPredicted RBP24.86■■□□□ 1.57
PTBP1-210ENST00000586944 GTF3C3Q9Y5Q9 886 aa24.84■■□□□ 1.57
PTBP1-210ENST00000586944 TRIM52Q96A61 297 aa24.83■■□□□ 1.57
PTBP1-210ENST00000586944 ARID3CA6NKF2 412 aa24.7■■□□□ 1.55
PTBP1-210ENST00000586944 FBLN2P98095 1184 aa24.64■■□□□ 1.54
PTBP1-210ENST00000586944 ACIN1Q9UKV3 1341 aaKnown RBP24.59■■□□□ 1.53
PTBP1-210ENST00000586944 BCANQ96GW7 911 aa24.57■■□□□ 1.52
PTBP1-210ENST00000586944 ZNF326Q5BKZ1 582 aaKnown RBP24.55■■□□□ 1.52
PTBP1-210ENST00000586944 ANP32CO43423 234 aa24.49■■□□□ 1.51
PTBP1-210ENST00000586944 MYT1Q01538 1121 aa24.47■■□□□ 1.51
PTBP1-210ENST00000586944 CECR2Q9BXF3 1484 aa24.46■■□□□ 1.51
PTBP1-210ENST00000586944 RB1CC1Q8TDY2 1594 aa24.44■■□□□ 1.5
PTBP1-210ENST00000586944 NACADO15069 1562 aa24.38■■□□□ 1.49
PTBP1-210ENST00000586944 CLIP1P30622 1438 aa24.38■■□□□ 1.49
PTBP1-210ENST00000586944 SLC4A1APQ9BWU0 796 aaKnown RBP24.36■■□□□ 1.49
PTBP1-210ENST00000586944 CEP162Q5TB80 1403 aa24.35■■□□□ 1.49
PTBP1-210ENST00000586944 ZNF777Q9ULD5 760 aaPredicted RBP24.32■■□□□ 1.48
PTBP1-210ENST00000586944 WRNQ14191 1432 aaPredicted RBP eCLIP24.27■■□□□ 1.483e-6■■■■□ 19.3
PTBP1-210ENST00000586944 DDX10Q13206 875 aaKnown RBP24.24■■□□□ 1.47
PTBP1-210ENST00000586944 DAXXQ9UER7 740 aaPredicted RBP24.21■■□□□ 1.47
PTBP1-210ENST00000586944 GOLGA3Q08378 1498 aa24.2■■□□□ 1.46
PTBP1-210ENST00000586944 CHIC2Q9UKJ5 165 aa24.2■■□□□ 1.46
PTBP1-210ENST00000586944 EEA1Q15075 1411 aa24.19■■□□□ 1.46
PTBP1-210ENST00000586944 MIER1Q8N108 512 aa24.18■■□□□ 1.46
PTBP1-210ENST00000586944 TONSLQ96HA7 1378 aa24.16■■□□□ 1.46
PTBP1-210ENST00000586944 TNIKQ9UKE5 1360 aa24.14■■□□□ 1.46
PTBP1-210ENST00000586944 CDK11AQ9UQ88 783 aaPredicted RBP24.13■■□□□ 1.45
PTBP1-210ENST00000586944 BAZ1AQ9NRL2 1556 aaPredicted RBP24.13■■□□□ 1.45
PTBP1-210ENST00000586944 SCAF1Q9H7N4 1312 aaKnown RBP24.12■■□□□ 1.45
PTBP1-210ENST00000586944 MROH2BQ7Z745 1585 aa24.11■■□□□ 1.45
PTBP1-210ENST00000586944 BAZ1BQ9UIG0 1483 aaKnown RBP24.11■■□□□ 1.45
PTBP1-210ENST00000586944 HIRIP3Q9BW71 556 aaPredicted RBP24.1■■□□□ 1.45
PTBP1-210ENST00000586944 SOGA1O94964 1423 aa24.08■■□□□ 1.45
PTBP1-210ENST00000586944 MTUS2Q5JR59 1369 aa24.02■■□□□ 1.44
PTBP1-210ENST00000586944 CLSPNQ9HAW4 1339 aa24■■□□□ 1.43
PTBP1-210ENST00000586944 FKBP8Q14318 412 aa23.99■■□□□ 1.43
PTBP1-210ENST00000586944 CEP164Q9UPV0 1460 aa23.98■■□□□ 1.43
PTBP1-210ENST00000586944 HNRNPUQ00839 825 aaKnown RBP eCLIP23.95■■□□□ 1.43
PTBP1-210ENST00000586944 KIF27Q86VH2 1401 aa23.92■■□□□ 1.42
PTBP1-210ENST00000586944 ABCC8Q09428 1581 aa23.91■■□□□ 1.42
PTBP1-210ENST00000586944 RRP7BPQ9NSQ0 103 aa23.91■■□□□ 1.42
PTBP1-210ENST00000586944 CCDC88BA6NC98 1476 aa23.9■■□□□ 1.42
PTBP1-210ENST00000586944 FAM9BQ8IZU0 186 aa23.9■■□□□ 1.42
PTBP1-210ENST00000586944 RTL5Q5HYW3 569 aaPredicted RBP23.84■■□□□ 1.41
PTBP1-210ENST00000586944 CHMP7Q8WUX9 453 aaPredicted RBP23.79■■□□□ 1.4
PTBP1-210ENST00000586944 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.78■■□□□ 1.41e-7■■□□□ 14.5
PTBP1-210ENST00000586944 WIZO95785 1651 aa23.77■■□□□ 1.4
PTBP1-210ENST00000586944 KDM2AQ9Y2K7 1162 aa23.76■■□□□ 1.39
PTBP1-210ENST00000586944 SALL2Q9Y467 1007 aaPredicted RBP23.75■■□□□ 1.39
PTBP1-210ENST00000586944 SIN3AQ96ST3 1273 aa23.75■■□□□ 1.39
PTBP1-210ENST00000586944 TSPY4P0CV99 314 aa23.72■■□□□ 1.39
PTBP1-210ENST00000586944 TSPY10P0CW01 314 aa23.72■■□□□ 1.39
PTBP1-210ENST00000586944 MRS2Q9HD23 443 aa23.68■■□□□ 1.38
PTBP1-210ENST00000586944 KANK4Q5T7N3 995 aaPredicted RBP23.67■■□□□ 1.38
PTBP1-210ENST00000586944 CHGAP10645 457 aaKnown RBP23.66■■□□□ 1.38
PTBP1-210ENST00000586944 IRX6P78412 446 aaPredicted RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms