RNA–Protein interactions for RNA: ENST00000635682.1

HSPG2-214, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-214ENST00000635682 NISCHQ9Y2I1 1504 aa36.21■■■■□ 3.39
HSPG2-214ENST00000635682 ABCC9O60706 1549 aa32.54■■■□□ 2.8
HSPG2-214ENST00000635682 CCDC180Q9P1Z9 1646 aa32.41■■■□□ 2.78
HSPG2-214ENST00000635682 RB1CC1Q8TDY2 1594 aa30.89■■■□□ 2.54
HSPG2-214ENST00000635682 DCAF8L2P0C7V8 631 aa30.74■■■□□ 2.51
HSPG2-214ENST00000635682 NACADO15069 1562 aa30.66■■■□□ 2.5
HSPG2-214ENST00000635682 DNAJC5BQ9UF47 199 aa30.57■■■□□ 2.48
HSPG2-214ENST00000635682 PABPN1Q86U42 306 aaKnown RBP eCLIP30.37■■■□□ 2.45
HSPG2-214ENST00000635682 UNC13AQ9UPW8 1703 aa30.23■■■□□ 2.43
HSPG2-214ENST00000635682 MYO15BQ96JP2 1530 aa30.2■■■□□ 2.42
HSPG2-214ENST00000635682 BICRAQ9NZM4 1560 aa30.02■■■□□ 2.4
HSPG2-214ENST00000635682 ZCCHC6Q5VYS8 1495 aaKnown RBP29.99■■■□□ 2.39
HSPG2-214ENST00000635682 DCAF1Q9Y4B6 1507 aa29.84■■■□□ 2.37
HSPG2-214ENST00000635682 SCRIBQ14160 1630 aa29.64■■■□□ 2.34
HSPG2-214ENST00000635682 SHROOM4Q9ULL8 1493 aa29.49■■■□□ 2.31
HSPG2-214ENST00000635682 CC2D2AQ9P2K1 1620 aa29.35■■■□□ 2.29
HSPG2-214ENST00000635682 CECR2Q9BXF3 1484 aa29.28■■■□□ 2.28
HSPG2-214ENST00000635682 EIF4G1Q04637 1599 aaKnown RBP29.26■■■□□ 2.28
HSPG2-214ENST00000635682 NCAPD3P42695 1498 aa28.34■■■□□ 2.13
HSPG2-214ENST00000635682 ATAD2BQ9ULI0 1458 aa28.27■■■□□ 2.12
HSPG2-214ENST00000635682 SMARCA4P51532 1647 aa28.24■■■□□ 2.11
HSPG2-214ENST00000635682 SMARCA2P51531 1590 aa28.16■■■□□ 2.1
HSPG2-214ENST00000635682 HMGXB3Q12766 1538 aa28.09■■■□□ 2.09
HSPG2-214ENST00000635682 BAZ1AQ9NRL2 1556 aaPredicted RBP28.08■■■□□ 2.09
HSPG2-214ENST00000635682 ERCC6Q03468 1493 aa28.07■■■□□ 2.08
HSPG2-214ENST00000635682 BAZ1BQ9UIG0 1483 aaKnown RBP28.01■■■□□ 2.07
HSPG2-214ENST00000635682 DNAJC5Q9H3Z4 198 aa28■■■□□ 2.07
HSPG2-214ENST00000635682 NESP48681 1621 aa27.97■■■□□ 2.07
HSPG2-214ENST00000635682 MROH2BQ7Z745 1585 aa27.94■■■□□ 2.06
HSPG2-214ENST00000635682 CUX2O14529 1486 aa27.94■■■□□ 2.06
HSPG2-214ENST00000635682 PEG3Q9GZU2 1588 aa27.91■■■□□ 2.06
HSPG2-214ENST00000635682 LAMC3Q9Y6N6 1575 aa27.67■■■□□ 2.02
HSPG2-214ENST00000635682 WIZO95785 1651 aa27.62■■■□□ 2.01
HSPG2-214ENST00000635682 THOC2Q8NI27 1593 aaKnown RBP27.59■■■□□ 2.01
HSPG2-214ENST00000635682 KIF21AQ7Z4S6 1674 aa27.56■■■□□ 2
HSPG2-214ENST00000635682 PDS5BQ9NTI5 1447 aa27.55■■■□□ 2
HSPG2-214ENST00000635682 CADPSQ9ULU8 1353 aa27.51■■□□□ 1.99
HSPG2-214ENST00000635682 RSF1Q96T23 1441 aaPredicted RBP27.37■■□□□ 1.97
HSPG2-214ENST00000635682 MRC2Q9UBG0 1479 aa27.31■■□□□ 1.96
HSPG2-214ENST00000635682 WDR62O43379 1518 aa27.21■■□□□ 1.95
HSPG2-214ENST00000635682 TOP2AP11388 1531 aaKnown RBP27.21■■□□□ 1.95
HSPG2-214ENST00000635682 CEP164Q9UPV0 1460 aa27.2■■□□□ 1.95
HSPG2-214ENST00000635682 FANCD2Q9BXW9 1451 aa27.19■■□□□ 1.94
HSPG2-214ENST00000635682 CFTRP13569 1480 aa27.17■■□□□ 1.94
HSPG2-214ENST00000635682 URB2Q14146 1524 aaKnown RBP26.98■■□□□ 1.91
HSPG2-214ENST00000635682 CCDC88BA6NC98 1476 aa26.96■■□□□ 1.91
HSPG2-214ENST00000635682 PRDM2Q13029 1718 aa26.87■■□□□ 1.89
HSPG2-214ENST00000635682 TRIM41Q8WV44 630 aa26.86■■□□□ 1.89
HSPG2-214ENST00000635682 OSCARQ8IYS5 282 aa26.77■■□□□ 1.88
HSPG2-214ENST00000635682 TOPBP1Q92547 1522 aa26.69■■□□□ 1.86
HSPG2-214ENST00000635682 ZNF608Q9ULD9 1512 aaPredicted RBP26.67■■□□□ 1.86
HSPG2-214ENST00000635682 IFT140Q96RY7 1462 aa26.66■■□□□ 1.86
HSPG2-214ENST00000635682 ABCC8Q09428 1581 aa26.58■■□□□ 1.85
HSPG2-214ENST00000635682 DNMBPQ6XZF7 1577 aa26.56■■□□□ 1.84
HSPG2-214ENST00000635682 SUPT5HO00267 1087 aaKnown RBP26.48■■□□□ 1.83
HSPG2-214ENST00000635682 EIF4G3O43432 1585 aaKnown RBP26.46■■□□□ 1.83
HSPG2-214ENST00000635682 AQRO60306 1485 aaKnown RBP eCLIP26.45■■□□□ 1.822e-7■■■■■ 42.5
HSPG2-214ENST00000635682 TARBP1Q13395 1621 aaKnown RBP26.43■■□□□ 1.82
HSPG2-214ENST00000635682 POLA1P09884 1462 aaPredicted RBP26.41■■□□□ 1.82
HSPG2-214ENST00000635682 RAD54L2Q9Y4B4 1467 aa26.37■■□□□ 1.81
HSPG2-214ENST00000635682 RIMBP3CA6NJZ7 1639 aa26.37■■□□□ 1.81
HSPG2-214ENST00000635682 RIMBP3BA6NNM3 1639 aa26.37■■□□□ 1.81
HSPG2-214ENST00000635682 RIMBP3Q9UFD9 1639 aa26.37■■□□□ 1.81
HSPG2-214ENST00000635682 FBLN2P98095 1184 aa26.33■■□□□ 1.81
HSPG2-214ENST00000635682 SOGA1O94964 1423 aa26.32■■□□□ 1.8
HSPG2-214ENST00000635682 TDRD9Q8NDG6 1382 aaKnown RBP26.31■■□□□ 1.8
HSPG2-214ENST00000635682 CHD1O14646 1710 aa26.3■■□□□ 1.8
HSPG2-214ENST00000635682 ARHGEF11O15085 1522 aa26.28■■□□□ 1.8
HSPG2-214ENST00000635682 FGD5Q6ZNL6 1462 aa26.26■■□□□ 1.79
HSPG2-214ENST00000635682 CUX1P39880 1505 aa26.24■■□□□ 1.79
HSPG2-214ENST00000635682 CYB5RLQ6IPT4 315 aa26.19■■□□□ 1.78
HSPG2-214ENST00000635682 SNAPC4Q5SXM2 1469 aa26.14■■□□□ 1.78
HSPG2-214ENST00000635682 CHMP7Q8WUX9 453 aaPredicted RBP26.09■■□□□ 1.77
HSPG2-214ENST00000635682 WDR97A6NE52 1622 aa26.07■■□□□ 1.76
HSPG2-214ENST00000635682 GRIN2BQ13224 1484 aa26.05■■□□□ 1.76
HSPG2-214ENST00000635682 ARAP1Q96P48 1450 aa26.04■■□□□ 1.76
HSPG2-214ENST00000635682 MAGI1Q96QZ7 1491 aaPredicted RBP26.02■■□□□ 1.76
HSPG2-214ENST00000635682 GAPVD1Q14C86 1478 aa25.98■■□□□ 1.75
HSPG2-214ENST00000635682 CLASP1Q7Z460 1538 aa25.95■■□□□ 1.74
HSPG2-214ENST00000635682 SYNJ2O15056 1496 aa25.95■■□□□ 1.74
HSPG2-214ENST00000635682 SYNJ1O43426 1573 aa25.95■■□□□ 1.74
HSPG2-214ENST00000635682 PBRM1Q86U86 1689 aa25.94■■□□□ 1.74
HSPG2-214ENST00000635682 ABCA10Q8WWZ4 1543 aa25.93■■□□□ 1.74
HSPG2-214ENST00000635682 TRHP20396 242 aaPredicted RBP25.9■■□□□ 1.74
HSPG2-214ENST00000635682 ABCA5Q8WWZ7 1642 aa25.88■■□□□ 1.73
HSPG2-214ENST00000635682 WRNQ14191 1432 aaPredicted RBP eCLIP25.85■■□□□ 1.73
HSPG2-214ENST00000635682 TOP2BQ02880 1626 aa25.79■■□□□ 1.72
HSPG2-214ENST00000635682 BIVM-ERCC5R4GMW8 1640 aa25.78■■□□□ 1.72
HSPG2-214ENST00000635682 GRIN2AQ12879 1464 aa25.71■■□□□ 1.71
HSPG2-214ENST00000635682 ADAMTS12P58397 1594 aa25.69■■□□□ 1.7
HSPG2-214ENST00000635682 FHAD1B1AJZ9 1412 aa25.63■■□□□ 1.69
HSPG2-214ENST00000635682 CEP170Q5SW79 1584 aa25.63■■□□□ 1.69
HSPG2-214ENST00000635682 ERCC6L2Q5T890 1561 aa25.63■■□□□ 1.69
HSPG2-214ENST00000635682 NUP160Q12769 1436 aa25.62■■□□□ 1.69
HSPG2-214ENST00000635682 ERICH3Q5RHP9 1530 aa25.58■■□□□ 1.69
HSPG2-214ENST00000635682 SHROOM2Q13796 1616 aa25.48■■□□□ 1.67
HSPG2-214ENST00000635682 JPH4Q96JJ6 628 aa25.44■■□□□ 1.66
HSPG2-214ENST00000635682 PRG4Q92954 1404 aaPredicted RBP25.42■■□□□ 1.66
HSPG2-214ENST00000635682 IGF1RP08069 1367 aa25.34■■□□□ 1.65
HSPG2-214ENST00000635682 KIF27Q86VH2 1401 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms