RNA–Protein interactions for RNA: ENST00000566176.5

SH2B1-210, Transcript of SH2B adaptor protein 1, humanhuman

TSL 4

Gene SH2B1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B1-210ENST00000566176 NISCHQ9Y2I1 1504 aa23.28■■□□□ 1.32
SH2B1-210ENST00000566176 CCDC180Q9P1Z9 1646 aa20.93■□□□□ 0.94
SH2B1-210ENST00000566176 ABCC9O60706 1549 aa20.85■□□□□ 0.93
SH2B1-210ENST00000566176 RB1CC1Q8TDY2 1594 aa19.84■□□□□ 0.77
SH2B1-210ENST00000566176 NACADO15069 1562 aa19.7■□□□□ 0.74
SH2B1-210ENST00000566176 UNC13AQ9UPW8 1703 aa19.53■□□□□ 0.72
SH2B1-210ENST00000566176 DNAJC5BQ9UF47 199 aa19.48■□□□□ 0.71
SH2B1-210ENST00000566176 DCAF8L2P0C7V8 631 aa19.45■□□□□ 0.7
SH2B1-210ENST00000566176 MYO15BQ96JP2 1530 aa19.43■□□□□ 0.7
SH2B1-210ENST00000566176 ZCCHC6Q5VYS8 1495 aaKnown RBP19.35■□□□□ 0.69
SH2B1-210ENST00000566176 BICRAQ9NZM4 1560 aa19.35■□□□□ 0.69
SH2B1-210ENST00000566176 PABPN1Q86U42 306 aaKnown RBP eCLIP19.34■□□□□ 0.69
SH2B1-210ENST00000566176 DCAF1Q9Y4B6 1507 aa19.21■□□□□ 0.67
SH2B1-210ENST00000566176 SCRIBQ14160 1630 aa19.1■□□□□ 0.65
SH2B1-210ENST00000566176 SHROOM4Q9ULL8 1493 aa19■□□□□ 0.63
SH2B1-210ENST00000566176 CC2D2AQ9P2K1 1620 aa18.86■□□□□ 0.61
SH2B1-210ENST00000566176 EIF4G1Q04637 1599 aaKnown RBP18.83■□□□□ 0.6
SH2B1-210ENST00000566176 CECR2Q9BXF3 1484 aa18.75■□□□□ 0.59
SH2B1-210ENST00000566176 SMARCA4P51532 1647 aa18.2■□□□□ 0.5
SH2B1-210ENST00000566176 NCAPD3P42695 1498 aa18.16■□□□□ 0.5
SH2B1-210ENST00000566176 ATAD2BQ9ULI0 1458 aa18.15■□□□□ 0.5
SH2B1-210ENST00000566176 HMGXB3Q12766 1538 aa18.11■□□□□ 0.49
SH2B1-210ENST00000566176 SMARCA2P51531 1590 aa18.09■□□□□ 0.49
SH2B1-210ENST00000566176 BAZ1AQ9NRL2 1556 aaPredicted RBP18.06■□□□□ 0.48
SH2B1-210ENST00000566176 PEG3Q9GZU2 1588 aa18■□□□□ 0.47
SH2B1-210ENST00000566176 BAZ1BQ9UIG0 1483 aaKnown RBP17.98■□□□□ 0.47
SH2B1-210ENST00000566176 MROH2BQ7Z745 1585 aa17.97■□□□□ 0.47
SH2B1-210ENST00000566176 ERCC6Q03468 1493 aa17.95■□□□□ 0.46
SH2B1-210ENST00000566176 NESP48681 1621 aa17.95■□□□□ 0.46
SH2B1-210ENST00000566176 CUX2O14529 1486 aa17.92■□□□□ 0.46
SH2B1-210ENST00000566176 THOC2Q8NI27 1593 aaKnown RBP17.83■□□□□ 0.44
SH2B1-210ENST00000566176 LAMC3Q9Y6N6 1575 aa17.79■□□□□ 0.44
SH2B1-210ENST00000566176 WIZO95785 1651 aa17.78■□□□□ 0.44
SH2B1-210ENST00000566176 KIF21AQ7Z4S6 1674 aa17.78■□□□□ 0.44
SH2B1-210ENST00000566176 DNAJC5Q9H3Z4 198 aa17.77■□□□□ 0.44
SH2B1-210ENST00000566176 PDS5BQ9NTI5 1447 aa17.6■□□□□ 0.41
SH2B1-210ENST00000566176 CADPSQ9ULU8 1353 aa17.59■□□□□ 0.41
SH2B1-210ENST00000566176 RSF1Q96T23 1441 aaPredicted RBP17.56■□□□□ 0.4
SH2B1-210ENST00000566176 TOP2AP11388 1531 aaKnown RBP17.54■□□□□ 0.4
SH2B1-210ENST00000566176 MRC2Q9UBG0 1479 aa17.54■□□□□ 0.4
SH2B1-210ENST00000566176 WDR62O43379 1518 aa17.53■□□□□ 0.4
SH2B1-210ENST00000566176 CEP164Q9UPV0 1460 aa17.47■□□□□ 0.39
SH2B1-210ENST00000566176 CFTRP13569 1480 aa17.44■□□□□ 0.38
SH2B1-210ENST00000566176 FANCD2Q9BXW9 1451 aa17.44■□□□□ 0.38
SH2B1-210ENST00000566176 PRDM2Q13029 1718 aa17.39■□□□□ 0.37
SH2B1-210ENST00000566176 URB2Q14146 1524 aaKnown RBP17.35■□□□□ 0.37
SH2B1-210ENST00000566176 CCDC88BA6NC98 1476 aa17.29■□□□□ 0.36
SH2B1-210ENST00000566176 TOPBP1Q92547 1522 aa17.15■□□□□ 0.34
SH2B1-210ENST00000566176 ZNF608Q9ULD9 1512 aaPredicted RBP17.12■□□□□ 0.33
SH2B1-210ENST00000566176 DNMBPQ6XZF7 1577 aa17.1■□□□□ 0.33
SH2B1-210ENST00000566176 IFT140Q96RY7 1462 aa17.09■□□□□ 0.33
SH2B1-210ENST00000566176 EIF4G3O43432 1585 aaKnown RBP17.08■□□□□ 0.32
SH2B1-210ENST00000566176 TRIM41Q8WV44 630 aa17.04■□□□□ 0.32
SH2B1-210ENST00000566176 TARBP1Q13395 1621 aaKnown RBP17.03■□□□□ 0.32
SH2B1-210ENST00000566176 ABCC8Q09428 1581 aa17■□□□□ 0.31
SH2B1-210ENST00000566176 POLA1P09884 1462 aaPredicted RBP16.98■□□□□ 0.31
SH2B1-210ENST00000566176 OSCARQ8IYS5 282 aa16.97■□□□□ 0.31
SH2B1-210ENST00000566176 CHD1O14646 1710 aa16.96■□□□□ 0.3
SH2B1-210ENST00000566176 RIMBP3CA6NJZ7 1639 aa16.96■□□□□ 0.3
SH2B1-210ENST00000566176 RIMBP3BA6NNM3 1639 aa16.96■□□□□ 0.3
SH2B1-210ENST00000566176 RIMBP3Q9UFD9 1639 aa16.96■□□□□ 0.3
SH2B1-210ENST00000566176 AQRO60306 1485 aaKnown RBP eCLIP16.92■□□□□ 0.34e-7■■■■■ 27
SH2B1-210ENST00000566176 RAD54L2Q9Y4B4 1467 aa16.91■□□□□ 0.3
SH2B1-210ENST00000566176 CUX1P39880 1505 aa16.9■□□□□ 0.3
SH2B1-210ENST00000566176 FGD5Q6ZNL6 1462 aa16.88■□□□□ 0.29
SH2B1-210ENST00000566176 ARHGEF11O15085 1522 aa16.88■□□□□ 0.29
SH2B1-210ENST00000566176 WDR97A6NE52 1622 aa16.85■□□□□ 0.29
SH2B1-210ENST00000566176 SOGA1O94964 1423 aa16.8■□□□□ 0.28
SH2B1-210ENST00000566176 SNAPC4Q5SXM2 1469 aa16.8■□□□□ 0.28
SH2B1-210ENST00000566176 TDRD9Q8NDG6 1382 aaKnown RBP16.79■□□□□ 0.28
SH2B1-210ENST00000566176 PBRM1Q86U86 1689 aa16.75■□□□□ 0.27
SH2B1-210ENST00000566176 ARAP1Q96P48 1450 aa16.74■□□□□ 0.27
SH2B1-210ENST00000566176 CLASP1Q7Z460 1538 aa16.74■□□□□ 0.27
SH2B1-210ENST00000566176 ABCA5Q8WWZ7 1642 aa16.71■□□□□ 0.27
SH2B1-210ENST00000566176 SUPT5HO00267 1087 aaKnown RBP16.71■□□□□ 0.27
SH2B1-210ENST00000566176 MAGI1Q96QZ7 1491 aaPredicted RBP16.71■□□□□ 0.27
SH2B1-210ENST00000566176 GRIN2BQ13224 1484 aa16.69■□□□□ 0.26
SH2B1-210ENST00000566176 FBLN2P98095 1184 aa16.69■□□□□ 0.26
SH2B1-210ENST00000566176 SYNJ1O43426 1573 aa16.67■□□□□ 0.26
SH2B1-210ENST00000566176 ABCA10Q8WWZ4 1543 aa16.66■□□□□ 0.26
SH2B1-210ENST00000566176 SYNJ2O15056 1496 aa16.65■□□□□ 0.26
SH2B1-210ENST00000566176 BIVM-ERCC5R4GMW8 1640 aa16.64■□□□□ 0.25
SH2B1-210ENST00000566176 GAPVD1Q14C86 1478 aa16.64■□□□□ 0.25
SH2B1-210ENST00000566176 TOP2BQ02880 1626 aa16.61■□□□□ 0.25
SH2B1-210ENST00000566176 CYB5RLQ6IPT4 315 aa16.6■□□□□ 0.25
SH2B1-210ENST00000566176 ADAMTS12P58397 1594 aa16.6■□□□□ 0.25
SH2B1-210ENST00000566176 CHMP7Q8WUX9 453 aaPredicted RBP16.56■□□□□ 0.24
SH2B1-210ENST00000566176 WRNQ14191 1432 aaPredicted RBP eCLIP16.55■□□□□ 0.24
SH2B1-210ENST00000566176 GRIN2AQ12879 1464 aa16.52■□□□□ 0.23
SH2B1-210ENST00000566176 CEP170Q5SW79 1584 aa16.51■□□□□ 0.23
SH2B1-210ENST00000566176 ERCC6L2Q5T890 1561 aa16.5■□□□□ 0.23
SH2B1-210ENST00000566176 NUP160Q12769 1436 aa16.46■□□□□ 0.23
SH2B1-210ENST00000566176 ERICH3Q5RHP9 1530 aa16.45■□□□□ 0.22
SH2B1-210ENST00000566176 SHROOM2Q13796 1616 aa16.44■□□□□ 0.22
SH2B1-210ENST00000566176 FHAD1B1AJZ9 1412 aa16.42■□□□□ 0.22
SH2B1-210ENST00000566176 TRHP20396 242 aaPredicted RBP16.39■□□□□ 0.21
SH2B1-210ENST00000566176 RUSC2Q8N2Y8 1516 aa16.37■□□□□ 0.21
SH2B1-210ENST00000566176 PRG4Q92954 1404 aaPredicted RBP16.26■□□□□ 0.19
SH2B1-210ENST00000566176 CUL7Q14999 1698 aa16.25■□□□□ 0.19
SH2B1-210ENST00000566176 KIF13AQ9H1H9 1805 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms