RNA–Protein interactions for RNA: ENST00000525982.5

CPNE7-203, Transcript of copine 7, humanhuman

TSL 5

Gene CPNE7, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-203ENST00000525982 NISCHQ9Y2I1 1504 aa52.71■■■■■ 6.03
CPNE7-203ENST00000525982 CCDC180Q9P1Z9 1646 aa47.39■■■■■ 5.18
CPNE7-203ENST00000525982 ABCC9O60706 1549 aa47.14■■■■■ 5.14
CPNE7-203ENST00000525982 RB1CC1Q8TDY2 1594 aa45.03■■■■■ 4.8
CPNE7-203ENST00000525982 NACADO15069 1562 aa44.74■■■■■ 4.75
CPNE7-203ENST00000525982 DCAF8L2P0C7V8 631 aa44.29■■■■■ 4.68
CPNE7-203ENST00000525982 MYO15BQ96JP2 1530 aa44.19■■■■■ 4.67
CPNE7-203ENST00000525982 DNAJC5BQ9UF47 199 aa44.07■■■■■ 4.65
CPNE7-203ENST00000525982 UNC13AQ9UPW8 1703 aa44.02■■■■■ 4.64
CPNE7-203ENST00000525982 PABPN1Q86U42 306 aaKnown RBP eCLIP43.81■■■■■ 4.6
CPNE7-203ENST00000525982 ZCCHC6Q5VYS8 1495 aaKnown RBP43.71■■■■■ 4.59
CPNE7-203ENST00000525982 BICRAQ9NZM4 1560 aa43.66■■■■■ 4.58
CPNE7-203ENST00000525982 DCAF1Q9Y4B6 1507 aa43.63■■■■■ 4.57
CPNE7-203ENST00000525982 SHROOM4Q9ULL8 1493 aa43.22■■■■■ 4.51
CPNE7-203ENST00000525982 SCRIBQ14160 1630 aa43.04■■■■■ 4.48
CPNE7-203ENST00000525982 CC2D2AQ9P2K1 1620 aa42.65■■■■■ 4.42
CPNE7-203ENST00000525982 EIF4G1Q04637 1599 aaKnown RBP42.6■■■■■ 4.41
CPNE7-203ENST00000525982 CECR2Q9BXF3 1484 aa42.49■■■■■ 4.39
CPNE7-203ENST00000525982 NCAPD3P42695 1498 aa41.26■■■■■ 4.2
CPNE7-203ENST00000525982 SMARCA4P51532 1647 aa41.13■■■■■ 4.17
CPNE7-203ENST00000525982 ATAD2BQ9ULI0 1458 aa41.1■■■■■ 4.17
CPNE7-203ENST00000525982 SMARCA2P51531 1590 aa41.08■■■■■ 4.17
CPNE7-203ENST00000525982 HMGXB3Q12766 1538 aa41.01■■■■■ 4.16
CPNE7-203ENST00000525982 BAZ1AQ9NRL2 1556 aaPredicted RBP40.95■■■■■ 4.15
CPNE7-203ENST00000525982 PEG3Q9GZU2 1588 aa40.78■■■■■ 4.12
CPNE7-203ENST00000525982 ERCC6Q03468 1493 aa40.74■■■■■ 4.11
CPNE7-203ENST00000525982 BAZ1BQ9UIG0 1483 aaKnown RBP40.74■■■■■ 4.11
CPNE7-203ENST00000525982 CUX2O14529 1486 aa40.71■■■■■ 4.11
CPNE7-203ENST00000525982 MROH2BQ7Z745 1585 aa40.57■■■■■ 4.08
CPNE7-203ENST00000525982 DNAJC5Q9H3Z4 198 aa40.52■■■■■ 4.08
CPNE7-203ENST00000525982 NESP48681 1621 aa40.49■■■■■ 4.07
CPNE7-203ENST00000525982 LAMC3Q9Y6N6 1575 aa40.37■■■■■ 4.05
CPNE7-203ENST00000525982 THOC2Q8NI27 1593 aaKnown RBP40.18■■■■■ 4.02
CPNE7-203ENST00000525982 WIZO95785 1651 aa40.1■■■■■ 4.01
CPNE7-203ENST00000525982 KIF21AQ7Z4S6 1674 aa40.08■■■■■ 4.01
CPNE7-203ENST00000525982 PDS5BQ9NTI5 1447 aa40.08■■■■■ 4.01
CPNE7-203ENST00000525982 CADPSQ9ULU8 1353 aa39.97■■■■□ 3.99
CPNE7-203ENST00000525982 RSF1Q96T23 1441 aaPredicted RBP39.74■■■■□ 3.95
CPNE7-203ENST00000525982 MRC2Q9UBG0 1479 aa39.73■■■■□ 3.95
CPNE7-203ENST00000525982 WDR62O43379 1518 aa39.65■■■■□ 3.94
CPNE7-203ENST00000525982 TOP2AP11388 1531 aaKnown RBP39.65■■■■□ 3.94
CPNE7-203ENST00000525982 CEP164Q9UPV0 1460 aa39.59■■■■□ 3.93
CPNE7-203ENST00000525982 CFTRP13569 1480 aa39.56■■■■□ 3.92
CPNE7-203ENST00000525982 FANCD2Q9BXW9 1451 aa39.52■■■■□ 3.92
CPNE7-203ENST00000525982 PRDM2Q13029 1718 aa39.3■■■■□ 3.88
CPNE7-203ENST00000525982 URB2Q14146 1524 aaKnown RBP39.18■■■■□ 3.86
CPNE7-203ENST00000525982 CCDC88BA6NC98 1476 aa39.13■■■■□ 3.85
CPNE7-203ENST00000525982 IFT140Q96RY7 1462 aa38.8■■■■□ 3.8
CPNE7-203ENST00000525982 ABCC8Q09428 1581 aa38.79■■■■□ 3.8
CPNE7-203ENST00000525982 TOPBP1Q92547 1522 aa38.79■■■■□ 3.8
CPNE7-203ENST00000525982 OSCARQ8IYS5 282 aa38.78■■■■□ 3.8
CPNE7-203ENST00000525982 DNMBPQ6XZF7 1577 aa38.7■■■■□ 3.79
CPNE7-203ENST00000525982 TRIM41Q8WV44 630 aa38.69■■■■□ 3.78
CPNE7-203ENST00000525982 ZNF608Q9ULD9 1512 aaPredicted RBP38.65■■■■□ 3.78
CPNE7-203ENST00000525982 EIF4G3O43432 1585 aaKnown RBP38.53■■■■□ 3.76
CPNE7-203ENST00000525982 TARBP1Q13395 1621 aaKnown RBP38.48■■■■□ 3.75
CPNE7-203ENST00000525982 POLA1P09884 1462 aaPredicted RBP38.39■■■■□ 3.74
CPNE7-203ENST00000525982 SUPT5HO00267 1087 aaKnown RBP38.33■■■■□ 3.73
CPNE7-203ENST00000525982 RIMBP3CA6NJZ7 1639 aa38.31■■■■□ 3.72
CPNE7-203ENST00000525982 RIMBP3BA6NNM3 1639 aa38.31■■■■□ 3.72
CPNE7-203ENST00000525982 RIMBP3Q9UFD9 1639 aa38.31■■■■□ 3.72
CPNE7-203ENST00000525982 AQRO60306 1485 aaKnown RBP eCLIP38.3■■■■□ 3.727e-10■■□□□ 12.1
CPNE7-203ENST00000525982 CHD1O14646 1710 aa38.24■■■■□ 3.71
CPNE7-203ENST00000525982 SOGA1O94964 1423 aa38.2■■■■□ 3.71
CPNE7-203ENST00000525982 ARHGEF11O15085 1522 aa38.19■■■■□ 3.7
CPNE7-203ENST00000525982 WDR97A6NE52 1622 aa38.19■■■■□ 3.7
CPNE7-203ENST00000525982 RAD54L2Q9Y4B4 1467 aa38.18■■■■□ 3.7
CPNE7-203ENST00000525982 FGD5Q6ZNL6 1462 aa38.15■■■■□ 3.7
CPNE7-203ENST00000525982 CUX1P39880 1505 aa38.12■■■■□ 3.69
CPNE7-203ENST00000525982 TDRD9Q8NDG6 1382 aaKnown RBP38.06■■■■□ 3.68
CPNE7-203ENST00000525982 FBLN2P98095 1184 aa38■■■■□ 3.67
CPNE7-203ENST00000525982 SNAPC4Q5SXM2 1469 aa37.96■■■■□ 3.67
CPNE7-203ENST00000525982 MAGI1Q96QZ7 1491 aaPredicted RBP37.93■■■■□ 3.66
CPNE7-203ENST00000525982 GRIN2BQ13224 1484 aa37.9■■■■□ 3.66
CPNE7-203ENST00000525982 CYB5RLQ6IPT4 315 aa37.81■■■■□ 3.64
CPNE7-203ENST00000525982 SYNJ1O43426 1573 aa37.8■■■■□ 3.64
CPNE7-203ENST00000525982 PBRM1Q86U86 1689 aa37.8■■■■□ 3.64
CPNE7-203ENST00000525982 CLASP1Q7Z460 1538 aa37.8■■■■□ 3.64
CPNE7-203ENST00000525982 ARAP1Q96P48 1450 aa37.79■■■■□ 3.64
CPNE7-203ENST00000525982 CHMP7Q8WUX9 453 aaPredicted RBP37.79■■■■□ 3.64
CPNE7-203ENST00000525982 SYNJ2O15056 1496 aa37.78■■■■□ 3.64
CPNE7-203ENST00000525982 ABCA10Q8WWZ4 1543 aa37.77■■■■□ 3.64
CPNE7-203ENST00000525982 GAPVD1Q14C86 1478 aa37.76■■■■□ 3.63
CPNE7-203ENST00000525982 ABCA5Q8WWZ7 1642 aa37.72■■■■□ 3.63
CPNE7-203ENST00000525982 BIVM-ERCC5R4GMW8 1640 aa37.61■■■■□ 3.61
CPNE7-203ENST00000525982 WRNQ14191 1432 aaPredicted RBP eCLIP37.61■■■■□ 3.61
CPNE7-203ENST00000525982 TOP2BQ02880 1626 aa37.59■■■■□ 3.61
CPNE7-203ENST00000525982 ADAMTS12P58397 1594 aa37.42■■■■□ 3.58
CPNE7-203ENST00000525982 GRIN2AQ12879 1464 aa37.41■■■■□ 3.58
CPNE7-203ENST00000525982 TRHP20396 242 aaPredicted RBP37.37■■■■□ 3.57
CPNE7-203ENST00000525982 ERICH3Q5RHP9 1530 aa37.32■■■■□ 3.57
CPNE7-203ENST00000525982 FHAD1B1AJZ9 1412 aa37.29■■■■□ 3.56
CPNE7-203ENST00000525982 NUP160Q12769 1436 aa37.28■■■■□ 3.56
CPNE7-203ENST00000525982 CEP170Q5SW79 1584 aa37.26■■■■□ 3.56
CPNE7-203ENST00000525982 SHROOM2Q13796 1616 aa37.16■■■■□ 3.54
CPNE7-203ENST00000525982 ERCC6L2Q5T890 1561 aa37.12■■■■□ 3.53
CPNE7-203ENST00000525982 RUSC2Q8N2Y8 1516 aa36.9■■■■□ 3.5
CPNE7-203ENST00000525982 PRG4Q92954 1404 aaPredicted RBP36.88■■■■□ 3.49
CPNE7-203ENST00000525982 JPH4Q96JJ6 628 aa36.84■■■■□ 3.49
CPNE7-203ENST00000525982 KIF27Q86VH2 1401 aa36.83■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms