RNA–Protein interactions for RNA: ENST00000334984.10

RREB1-201, Transcript of ras responsive element binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RREB1, Length 5,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RREB1-201ENST00000334984 DCAF8L2P0C7V8 631 aa33.17■■■□□ 2.9
RREB1-201ENST00000334984 NISCHQ9Y2I1 1504 aa31.08■■■□□ 2.57
RREB1-201ENST00000334984 SUPT5HO00267 1087 aaKnown RBP30.27■■■□□ 2.44
RREB1-201ENST00000334984 FAM9AQ8IZU1 332 aaPredicted RBP30.25■■■□□ 2.43
RREB1-201ENST00000334984 SHROOM4Q9ULL8 1493 aa29.87■■■□□ 2.37
RREB1-201ENST00000334984 APLP2Q06481 763 aa29.55■■■□□ 2.32
RREB1-201ENST00000334984 EHMT2Q96KQ7 1210 aa29.28■■■□□ 2.28
RREB1-201ENST00000334984 ATP1B4Q9UN42 357 aaPredicted RBP28.67■■■□□ 2.18
RREB1-201ENST00000334984 RANGAP1P46060 587 aaPredicted RBP28.52■■■□□ 2.16
RREB1-201ENST00000334984 TRIM41Q8WV44 630 aa28.31■■■□□ 2.12
RREB1-201ENST00000334984 MYT1LQ9UL68 1186 aa28.25■■■□□ 2.11
RREB1-201ENST00000334984 PELP1Q8IZL8 1130 aaKnown RBP28.22■■■□□ 2.11
RREB1-201ENST00000334984 UBTFP17480 764 aaKnown RBP28.2■■■□□ 2.11
RREB1-201ENST00000334984 TTBK1Q5TCY1 1321 aaPredicted RBP28.17■■■□□ 2.1
RREB1-201ENST00000334984 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.03■■■□□ 2.08
RREB1-201ENST00000334984 HNRNPUL2Q1KMD3 747 aaKnown RBP28.03■■■□□ 2.08
RREB1-201ENST00000334984 ABCC9O60706 1549 aa27.84■■■□□ 2.05
RREB1-201ENST00000334984 PABPN1Q86U42 306 aaKnown RBP eCLIP27.6■■■□□ 2.01
RREB1-201ENST00000334984 PCGF6Q9BYE7 350 aa27.51■■■□□ 2
RREB1-201ENST00000334984 CCER1Q8TC90 406 aaPredicted RBP27.36■■□□□ 1.97
RREB1-201ENST00000334984 CHIC1Q5VXU3 224 aa27.33■■□□□ 1.97
RREB1-201ENST00000334984 FBLN2P98095 1184 aa27.23■■□□□ 1.95
RREB1-201ENST00000334984 ZEB1P37275 1124 aaPredicted RBP27.19■■□□□ 1.94
RREB1-201ENST00000334984 ITGAEP38570 1179 aa27.05■■□□□ 1.92
RREB1-201ENST00000334984 SLC4A1APQ9BWU0 796 aaKnown RBP26.97■■□□□ 1.91
RREB1-201ENST00000334984 POLR3GLQ9BT43 218 aa26.94■■□□□ 1.9
RREB1-201ENST00000334984 NEFLP07196 543 aa26.83■■□□□ 1.89
RREB1-201ENST00000334984 CENPBP07199 599 aaPredicted RBP26.82■■□□□ 1.88
RREB1-201ENST00000334984 ERICH6Q7L0X2 663 aa26.8■■□□□ 1.88
RREB1-201ENST00000334984 ESF1Q9H501 851 aaKnown RBP26.77■■□□□ 1.88
RREB1-201ENST00000334984 NPM1P06748 294 aaKnown RBP eCLIP26.77■■□□□ 1.88
RREB1-201ENST00000334984 PPARGC1BQ86YN6 1023 aaKnown RBP26.7■■□□□ 1.86
RREB1-201ENST00000334984 BCANQ96GW7 911 aa26.69■■□□□ 1.86
RREB1-201ENST00000334984 FAM50AQ14320 339 aaKnown RBP26.6■■□□□ 1.85
RREB1-201ENST00000334984 TRIM52Q96A61 297 aa26.58■■□□□ 1.85
RREB1-201ENST00000334984 CDK11AQ9UQ88 783 aaPredicted RBP26.47■■□□□ 1.83
RREB1-201ENST00000334984 TRIM26Q12899 539 aaPredicted RBP26.31■■□□□ 1.8
RREB1-201ENST00000334984 CNGB1Q14028 1251 aaPredicted RBP26.31■■□□□ 1.8
RREB1-201ENST00000334984 SCRIBQ14160 1630 aa26.28■■□□□ 1.8
RREB1-201ENST00000334984 STAG3Q9UJ98 1225 aa26.27■■□□□ 1.8
RREB1-201ENST00000334984 DAXXQ9UER7 740 aaPredicted RBP26.22■■□□□ 1.79
RREB1-201ENST00000334984 PLPPR3Q6T4P5 718 aa26.22■■□□□ 1.79
RREB1-201ENST00000334984 ARID3CA6NKF2 412 aa26.2■■□□□ 1.78
RREB1-201ENST00000334984 ZNF777Q9ULD5 760 aaPredicted RBP26.19■■□□□ 1.78
RREB1-201ENST00000334984 YTHDC1Q96MU7 727 aaKnown RBP26.16■■□□□ 1.78
RREB1-201ENST00000334984 NEFMP07197 916 aa26.14■■□□□ 1.78
RREB1-201ENST00000334984 P3H3Q8IVL6 736 aa26.11■■□□□ 1.77
RREB1-201ENST00000334984 ZNF326Q5BKZ1 582 aaKnown RBP26.11■■□□□ 1.77
RREB1-201ENST00000334984 SLC24A1O60721 1099 aa26.1■■□□□ 1.77
RREB1-201ENST00000334984 CHMP7Q8WUX9 453 aaPredicted RBP26.09■■□□□ 1.77
RREB1-201ENST00000334984 LOC105371045A0A1W2PR82 267 aa26.05■■□□□ 1.76
RREB1-201ENST00000334984 RB1CC1Q8TDY2 1594 aa26.04■■□□□ 1.76
RREB1-201ENST00000334984 ZBTB47Q9UFB7 747 aaPredicted RBP25.97■■□□□ 1.75
RREB1-201ENST00000334984 CHGAP10645 457 aaKnown RBP25.94■■□□□ 1.74
RREB1-201ENST00000334984 NEUROD1Q13562 356 aa25.91■■□□□ 1.74
RREB1-201ENST00000334984 CLSPNQ9HAW4 1339 aa25.86■■□□□ 1.73
RREB1-201ENST00000334984 CSRNP3Q8WYN3 585 aa25.86■■□□□ 1.73
RREB1-201ENST00000334984 ERCC6Q03468 1493 aa25.82■■□□□ 1.72
RREB1-201ENST00000334984 CCDC180Q9P1Z9 1646 aa25.81■■□□□ 1.72
RREB1-201ENST00000334984 ARID4BQ4LE39 1312 aaPredicted RBP25.67■■□□□ 1.7
RREB1-201ENST00000334984 TSPY4P0CV99 314 aa25.64■■□□□ 1.7
RREB1-201ENST00000334984 TSPY10P0CW01 314 aa25.64■■□□□ 1.7
RREB1-201ENST00000334984 TRHP20396 242 aaPredicted RBP25.62■■□□□ 1.69
RREB1-201ENST00000334984 SCAF1Q9H7N4 1312 aaKnown RBP25.62■■□□□ 1.69
RREB1-201ENST00000334984 CANXP27824 592 aaKnown RBP25.57■■□□□ 1.68
RREB1-201ENST00000334984 C14orf37Q86TY3 774 aa25.56■■□□□ 1.68
RREB1-201ENST00000334984 PPP1R15AO75807 674 aaPredicted RBP25.54■■□□□ 1.68
RREB1-201ENST00000334984 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.54■■□□□ 1.686e-7■□□□□ 11.1
RREB1-201ENST00000334984 NACADO15069 1562 aa25.53■■□□□ 1.68
RREB1-201ENST00000334984 ZCCHC6Q5VYS8 1495 aaKnown RBP25.52■■□□□ 1.68
RREB1-201ENST00000334984 ZNF316A6NFI3 1004 aaPredicted RBP25.5■■□□□ 1.67
RREB1-201ENST00000334984 KCNH8Q96L42 1107 aa25.5■■□□□ 1.67
RREB1-201ENST00000334984 ANP32CO43423 234 aa25.48■■□□□ 1.67
RREB1-201ENST00000334984 PLEKHD1A6NEE1 506 aa25.46■■□□□ 1.67
RREB1-201ENST00000334984 HAP1P54257 671 aaPredicted RBP25.42■■□□□ 1.66
RREB1-201ENST00000334984 A0A0G2JS52 829 aa25.42■■□□□ 1.66
RREB1-201ENST00000334984 NPM2Q86SE8 214 aaKnown RBP25.41■■□□□ 1.66
RREB1-201ENST00000334984 BAZ1BQ9UIG0 1483 aaKnown RBP25.39■■□□□ 1.65
RREB1-201ENST00000334984 HRCP23327 699 aa25.39■■□□□ 1.65
RREB1-201ENST00000334984 MTUS2Q5JR59 1369 aa25.34■■□□□ 1.65
RREB1-201ENST00000334984 BCL11AQ9H165 835 aa25.26■■□□□ 1.63
RREB1-201ENST00000334984 TONSLQ96HA7 1378 aa25.21■■□□□ 1.63
RREB1-201ENST00000334984 CHIC2Q9UKJ5 165 aa25.21■■□□□ 1.63
RREB1-201ENST00000334984 ZBTB7CA1YPR0 619 aa25.2■■□□□ 1.62
RREB1-201ENST00000334984 RSF1Q96T23 1441 aaPredicted RBP25.17■■□□□ 1.62
RREB1-201ENST00000334984 ACIN1Q9UKV3 1341 aaKnown RBP25.15■■□□□ 1.62
RREB1-201ENST00000334984 DIEXFQ68CQ4 756 aaKnown RBP25.08■■□□□ 1.61
RREB1-201ENST00000334984 PLEKHG5O94827 1062 aa25.05■■□□□ 1.6
RREB1-201ENST00000334984 HDGFP51858 240 aaKnown RBP25.04■■□□□ 1.6
RREB1-201ENST00000334984 KIF27Q86VH2 1401 aa25■■□□□ 1.59
RREB1-201ENST00000334984 CFDP1Q9UEE9 299 aaPredicted RBP24.99■■□□□ 1.59
RREB1-201ENST00000334984 KDM2AQ9Y2K7 1162 aa24.98■■□□□ 1.59
RREB1-201ENST00000334984 PDS5BQ9NTI5 1447 aa24.97■■□□□ 1.59
RREB1-201ENST00000334984 RTL5Q5HYW3 569 aaPredicted RBP24.95■■□□□ 1.58
RREB1-201ENST00000334984 MYT1Q01538 1121 aa24.93■■□□□ 1.58
RREB1-201ENST00000334984 SENP3Q9H4L4 574 aaPredicted RBP24.89■■□□□ 1.58
RREB1-201ENST00000334984 LMOD2Q6P5Q4 547 aa24.88■■□□□ 1.57
RREB1-201ENST00000334984 WDR43Q15061 677 aaKnown RBP eCLIP24.88■■□□□ 1.57
RREB1-201ENST00000334984 EEA1Q15075 1411 aa24.87■■□□□ 1.57
RREB1-201ENST00000334984 WRNQ14191 1432 aaPredicted RBP eCLIP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms