RNA–Protein interactions for RNA: ENST00000616387.4

MED16-213, Transcript of mediator complex subunit 16, humanhuman

TSL 1 (best) BASIC

Gene MED16, Length 1,078 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED16-213ENST00000616387 NISCHQ9Y2I1 1504 aa42.61■■■■■ 4.41
MED16-213ENST00000616387 ABCC9O60706 1549 aa38.3■■■■□ 3.72
MED16-213ENST00000616387 CCDC180Q9P1Z9 1646 aa38.21■■■■□ 3.71
MED16-213ENST00000616387 RB1CC1Q8TDY2 1594 aa36.46■■■■□ 3.43
MED16-213ENST00000616387 NACADO15069 1562 aa36.24■■■■□ 3.39
MED16-213ENST00000616387 DNAJC5BQ9UF47 199 aa36.16■■■■□ 3.38
MED16-213ENST00000616387 DCAF8L2P0C7V8 631 aa36.01■■■■□ 3.36
MED16-213ENST00000616387 MYO15BQ96JP2 1530 aa35.8■■■■□ 3.32
MED16-213ENST00000616387 PABPN1Q86U42 306 aaKnown RBP eCLIP35.71■■■■□ 3.31
MED16-213ENST00000616387 UNC13AQ9UPW8 1703 aa35.5■■■■□ 3.27
MED16-213ENST00000616387 BICRAQ9NZM4 1560 aa35.39■■■■□ 3.26
MED16-213ENST00000616387 DCAF1Q9Y4B6 1507 aa35.27■■■■□ 3.24
MED16-213ENST00000616387 ZCCHC6Q5VYS8 1495 aaKnown RBP35.25■■■■□ 3.23
MED16-213ENST00000616387 SHROOM4Q9ULL8 1493 aa35.02■■■■□ 3.2
MED16-213ENST00000616387 SCRIBQ14160 1630 aa34.7■■■■□ 3.15
MED16-213ENST00000616387 CC2D2AQ9P2K1 1620 aa34.59■■■■□ 3.13
MED16-213ENST00000616387 CECR2Q9BXF3 1484 aa34.57■■■■□ 3.12
MED16-213ENST00000616387 EIF4G1Q04637 1599 aaKnown RBP34.52■■■■□ 3.12
MED16-213ENST00000616387 NCAPD3P42695 1498 aa33.53■■■□□ 2.96
MED16-213ENST00000616387 DNAJC5Q9H3Z4 198 aa33.37■■■□□ 2.93
MED16-213ENST00000616387 ATAD2BQ9ULI0 1458 aa33.34■■■□□ 2.93
MED16-213ENST00000616387 SMARCA2P51531 1590 aa33.22■■■□□ 2.91
MED16-213ENST00000616387 SMARCA4P51532 1647 aa33.19■■■□□ 2.9
MED16-213ENST00000616387 HMGXB3Q12766 1538 aa33.17■■■□□ 2.9
MED16-213ENST00000616387 CUX2O14529 1486 aa33.15■■■□□ 2.9
MED16-213ENST00000616387 ERCC6Q03468 1493 aa33.08■■■□□ 2.89
MED16-213ENST00000616387 BAZ1AQ9NRL2 1556 aaPredicted RBP33.06■■■□□ 2.88
MED16-213ENST00000616387 PEG3Q9GZU2 1588 aa32.96■■■□□ 2.87
MED16-213ENST00000616387 BAZ1BQ9UIG0 1483 aaKnown RBP32.95■■■□□ 2.87
MED16-213ENST00000616387 NESP48681 1621 aa32.87■■■□□ 2.85
MED16-213ENST00000616387 MROH2BQ7Z745 1585 aa32.79■■■□□ 2.84
MED16-213ENST00000616387 LAMC3Q9Y6N6 1575 aa32.69■■■□□ 2.82
MED16-213ENST00000616387 PDS5BQ9NTI5 1447 aa32.58■■■□□ 2.81
MED16-213ENST00000616387 THOC2Q8NI27 1593 aaKnown RBP32.52■■■□□ 2.8
MED16-213ENST00000616387 CADPSQ9ULU8 1353 aa32.49■■■□□ 2.79
MED16-213ENST00000616387 KIF21AQ7Z4S6 1674 aa32.36■■■□□ 2.77
MED16-213ENST00000616387 WIZO95785 1651 aa32.31■■■□□ 2.76
MED16-213ENST00000616387 RSF1Q96T23 1441 aaPredicted RBP32.21■■■□□ 2.75
MED16-213ENST00000616387 MRC2Q9UBG0 1479 aa32.21■■■□□ 2.75
MED16-213ENST00000616387 WDR62O43379 1518 aa32.12■■■□□ 2.73
MED16-213ENST00000616387 CFTRP13569 1480 aa32.07■■■□□ 2.72
MED16-213ENST00000616387 CEP164Q9UPV0 1460 aa32.05■■■□□ 2.72
MED16-213ENST00000616387 FANCD2Q9BXW9 1451 aa32.03■■■□□ 2.72
MED16-213ENST00000616387 TOP2AP11388 1531 aaKnown RBP31.95■■■□□ 2.71
MED16-213ENST00000616387 URB2Q14146 1524 aaKnown RBP31.75■■■□□ 2.67
MED16-213ENST00000616387 OSCARQ8IYS5 282 aa31.72■■■□□ 2.67
MED16-213ENST00000616387 TRIM41Q8WV44 630 aa31.68■■■□□ 2.66
MED16-213ENST00000616387 CCDC88BA6NC98 1476 aa31.65■■■□□ 2.66
MED16-213ENST00000616387 SUPT5HO00267 1087 aaKnown RBP31.57■■■□□ 2.64
MED16-213ENST00000616387 PRDM2Q13029 1718 aa31.55■■■□□ 2.64
MED16-213ENST00000616387 IFT140Q96RY7 1462 aa31.47■■■□□ 2.63
MED16-213ENST00000616387 ABCC8Q09428 1581 aa31.45■■■□□ 2.63
MED16-213ENST00000616387 TOPBP1Q92547 1522 aa31.4■■■□□ 2.62
MED16-213ENST00000616387 ZNF608Q9ULD9 1512 aaPredicted RBP31.36■■■□□ 2.61
MED16-213ENST00000616387 DNMBPQ6XZF7 1577 aa31.26■■■□□ 2.59
MED16-213ENST00000616387 TARBP1Q13395 1621 aaKnown RBP31.12■■■□□ 2.57
MED16-213ENST00000616387 AQRO60306 1485 aaKnown RBP eCLIP31.11■■■□□ 2.571e-6■■■■□ 25.8
MED16-213ENST00000616387 RIMBP3CA6NJZ7 1639 aa31.1■■■□□ 2.57
MED16-213ENST00000616387 RIMBP3BA6NNM3 1639 aa31.1■■■□□ 2.57
MED16-213ENST00000616387 RIMBP3Q9UFD9 1639 aa31.1■■■□□ 2.57
MED16-213ENST00000616387 EIF4G3O43432 1585 aaKnown RBP31.1■■■□□ 2.57
MED16-213ENST00000616387 POLA1P09884 1462 aaPredicted RBP31.08■■■□□ 2.57
MED16-213ENST00000616387 ARHGEF11O15085 1522 aa31.04■■■□□ 2.56
MED16-213ENST00000616387 SOGA1O94964 1423 aa31■■■□□ 2.55
MED16-213ENST00000616387 RAD54L2Q9Y4B4 1467 aa30.95■■■□□ 2.54
MED16-213ENST00000616387 FBLN2P98095 1184 aa30.92■■■□□ 2.54
MED16-213ENST00000616387 TDRD9Q8NDG6 1382 aaKnown RBP30.92■■■□□ 2.54
MED16-213ENST00000616387 CYB5RLQ6IPT4 315 aa30.91■■■□□ 2.54
MED16-213ENST00000616387 CHD1O14646 1710 aa30.87■■■□□ 2.53
MED16-213ENST00000616387 WDR97A6NE52 1622 aa30.84■■■□□ 2.53
MED16-213ENST00000616387 FGD5Q6ZNL6 1462 aa30.83■■■□□ 2.53
MED16-213ENST00000616387 CUX1P39880 1505 aa30.79■■■□□ 2.52
MED16-213ENST00000616387 CHMP7Q8WUX9 453 aaPredicted RBP30.75■■■□□ 2.51
MED16-213ENST00000616387 SNAPC4Q5SXM2 1469 aa30.72■■■□□ 2.51
MED16-213ENST00000616387 ARAP1Q96P48 1450 aa30.72■■■□□ 2.51
MED16-213ENST00000616387 MAGI1Q96QZ7 1491 aaPredicted RBP30.72■■■□□ 2.51
MED16-213ENST00000616387 GRIN2BQ13224 1484 aa30.71■■■□□ 2.51
MED16-213ENST00000616387 CLASP1Q7Z460 1538 aa30.63■■■□□ 2.49
MED16-213ENST00000616387 SYNJ2O15056 1496 aa30.62■■■□□ 2.49
MED16-213ENST00000616387 SYNJ1O43426 1573 aa30.59■■■□□ 2.49
MED16-213ENST00000616387 GAPVD1Q14C86 1478 aa30.58■■■□□ 2.49
MED16-213ENST00000616387 TRHP20396 242 aaPredicted RBP30.55■■■□□ 2.48
MED16-213ENST00000616387 ABCA10Q8WWZ4 1543 aa30.55■■■□□ 2.48
MED16-213ENST00000616387 WRNQ14191 1432 aaPredicted RBP eCLIP30.43■■■□□ 2.46
MED16-213ENST00000616387 ABCA5Q8WWZ7 1642 aa30.42■■■□□ 2.46
MED16-213ENST00000616387 PBRM1Q86U86 1689 aa30.41■■■□□ 2.46
MED16-213ENST00000616387 TOP2BQ02880 1626 aa30.29■■■□□ 2.44
MED16-213ENST00000616387 GRIN2AQ12879 1464 aa30.28■■■□□ 2.44
MED16-213ENST00000616387 BIVM-ERCC5R4GMW8 1640 aa30.25■■■□□ 2.43
MED16-213ENST00000616387 NUP160Q12769 1436 aa30.23■■■□□ 2.43
MED16-213ENST00000616387 FHAD1B1AJZ9 1412 aa30.22■■■□□ 2.43
MED16-213ENST00000616387 ADAMTS12P58397 1594 aa30.18■■■□□ 2.42
MED16-213ENST00000616387 ERICH3Q5RHP9 1530 aa30.16■■■□□ 2.42
MED16-213ENST00000616387 CEP170Q5SW79 1584 aa30.11■■■□□ 2.41
MED16-213ENST00000616387 ERCC6L2Q5T890 1561 aa30.07■■■□□ 2.4
MED16-213ENST00000616387 SHROOM2Q13796 1616 aa30.04■■■□□ 2.4
MED16-213ENST00000616387 JPH4Q96JJ6 628 aa30.02■■■□□ 2.4
MED16-213ENST00000616387 PRG4Q92954 1404 aaPredicted RBP29.93■■■□□ 2.38
MED16-213ENST00000616387 IGF1RP08069 1367 aa29.84■■■□□ 2.37
MED16-213ENST00000616387 KIF27Q86VH2 1401 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms