RNA–Protein interactions for RNA: ENST00000564439.5

RPL4-205, Transcript of ribosomal protein L4, humanhuman

TSL 3

Gene RPL4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-205ENST00000564439 NISCHQ9Y2I1 1504 aa25.88■■□□□ 1.73
RPL4-205ENST00000564439 CCDC180Q9P1Z9 1646 aa22.9■■□□□ 1.26
RPL4-205ENST00000564439 ABCC9O60706 1549 aa22.26■■□□□ 1.15
RPL4-205ENST00000564439 ZCCHC6Q5VYS8 1495 aaKnown RBP21.6■■□□□ 1.05
RPL4-205ENST00000564439 NACADO15069 1562 aa21.51■■□□□ 1.03
RPL4-205ENST00000564439 MYO15BQ96JP2 1530 aa21.48■■□□□ 1.03
RPL4-205ENST00000564439 DCAF8L2P0C7V8 631 aa21.47■■□□□ 1.03
RPL4-205ENST00000564439 RB1CC1Q8TDY2 1594 aa21.47■■□□□ 1.03
RPL4-205ENST00000564439 DCAF1Q9Y4B6 1507 aa21.44■■□□□ 1.02
RPL4-205ENST00000564439 UNC13AQ9UPW8 1703 aa21■□□□□ 0.95
RPL4-205ENST00000564439 SCRIBQ14160 1630 aa20.9■□□□□ 0.94
RPL4-205ENST00000564439 BICRAQ9NZM4 1560 aa20.88■□□□□ 0.93
RPL4-205ENST00000564439 PABPN1Q86U42 306 aaKnown RBP eCLIP20.84■□□□□ 0.93
RPL4-205ENST00000564439 DNAJC5BQ9UF47 199 aa20.72■□□□□ 0.91
RPL4-205ENST00000564439 SHROOM4Q9ULL8 1493 aa20.65■□□□□ 0.9
RPL4-205ENST00000564439 EIF4G1Q04637 1599 aaKnown RBP20.28■□□□□ 0.84
RPL4-205ENST00000564439 CECR2Q9BXF3 1484 aa20.16■□□□□ 0.82
RPL4-205ENST00000564439 CC2D2AQ9P2K1 1620 aa20.15■□□□□ 0.82
RPL4-205ENST00000564439 SMARCA4P51532 1647 aa20.03■□□□□ 0.8
RPL4-205ENST00000564439 BAZ1AQ9NRL2 1556 aaPredicted RBP20.02■□□□□ 0.8
RPL4-205ENST00000564439 MROH2BQ7Z745 1585 aa19.95■□□□□ 0.78
RPL4-205ENST00000564439 ATAD2BQ9ULI0 1458 aa19.9■□□□□ 0.78
RPL4-205ENST00000564439 NCAPD3P42695 1498 aa19.88■□□□□ 0.77
RPL4-205ENST00000564439 PEG3Q9GZU2 1588 aa19.87■□□□□ 0.77
RPL4-205ENST00000564439 SMARCA2P51531 1590 aa19.86■□□□□ 0.77
RPL4-205ENST00000564439 RSF1Q96T23 1441 aaPredicted RBP19.79■□□□□ 0.76
RPL4-205ENST00000564439 HMGXB3Q12766 1538 aa19.78■□□□□ 0.76
RPL4-205ENST00000564439 BAZ1BQ9UIG0 1483 aaKnown RBP19.72■□□□□ 0.75
RPL4-205ENST00000564439 WIZO95785 1651 aa19.71■□□□□ 0.75
RPL4-205ENST00000564439 TOP2AP11388 1531 aaKnown RBP19.52■□□□□ 0.72
RPL4-205ENST00000564439 NESP48681 1621 aa19.33■□□□□ 0.69
RPL4-205ENST00000564439 SUPT5HO00267 1087 aaKnown RBP19.33■□□□□ 0.68
RPL4-205ENST00000564439 CCDC88BA6NC98 1476 aa19.31■□□□□ 0.68
RPL4-205ENST00000564439 CADPSQ9ULU8 1353 aa19.29■□□□□ 0.68
RPL4-205ENST00000564439 LAMC3Q9Y6N6 1575 aa19.28■□□□□ 0.68
RPL4-205ENST00000564439 CFTRP13569 1480 aa19.22■□□□□ 0.67
RPL4-205ENST00000564439 PDS5BQ9NTI5 1447 aa19.15■□□□□ 0.66
RPL4-205ENST00000564439 ERCC6Q03468 1493 aa19.15■□□□□ 0.66
RPL4-205ENST00000564439 CUX2O14529 1486 aa19.09■□□□□ 0.65
RPL4-205ENST00000564439 KIF21AQ7Z4S6 1674 aa19.08■□□□□ 0.64
RPL4-205ENST00000564439 FANCD2Q9BXW9 1451 aa19.05■□□□□ 0.64
RPL4-205ENST00000564439 DNAJC5Q9H3Z4 198 aa19.03■□□□□ 0.64
RPL4-205ENST00000564439 PRDM2Q13029 1718 aa19.03■□□□□ 0.64
RPL4-205ENST00000564439 THOC2Q8NI27 1593 aaKnown RBP19■□□□□ 0.63
RPL4-205ENST00000564439 CEP164Q9UPV0 1460 aa18.99■□□□□ 0.63
RPL4-205ENST00000564439 MRC2Q9UBG0 1479 aa18.95■□□□□ 0.62
RPL4-205ENST00000564439 WDR62O43379 1518 aa18.9■□□□□ 0.62
RPL4-205ENST00000564439 URB2Q14146 1524 aaKnown RBP18.88■□□□□ 0.61
RPL4-205ENST00000564439 TOPBP1Q92547 1522 aa18.78■□□□□ 0.6
RPL4-205ENST00000564439 ABCC8Q09428 1581 aa18.76■□□□□ 0.59
RPL4-205ENST00000564439 DNMBPQ6XZF7 1577 aa18.75■□□□□ 0.59
RPL4-205ENST00000564439 CUX1P39880 1505 aa18.7■□□□□ 0.58
RPL4-205ENST00000564439 POLA1P09884 1462 aaPredicted RBP18.64■□□□□ 0.57
RPL4-205ENST00000564439 WRNQ14191 1432 aaPredicted RBP eCLIP18.62■□□□□ 0.57
RPL4-205ENST00000564439 IFT140Q96RY7 1462 aa18.61■□□□□ 0.57
RPL4-205ENST00000564439 FGD5Q6ZNL6 1462 aa18.59■□□□□ 0.57
RPL4-205ENST00000564439 SYNJ1O43426 1573 aa18.58■□□□□ 0.56
RPL4-205ENST00000564439 TOP2BQ02880 1626 aa18.57■□□□□ 0.56
RPL4-205ENST00000564439 TARBP1Q13395 1621 aaKnown RBP18.56■□□□□ 0.56
RPL4-205ENST00000564439 BIVM-ERCC5R4GMW8 1640 aa18.56■□□□□ 0.56
RPL4-205ENST00000564439 RAD54L2Q9Y4B4 1467 aa18.54■□□□□ 0.56
RPL4-205ENST00000564439 SOGA1O94964 1423 aa18.54■□□□□ 0.56
RPL4-205ENST00000564439 ZNF608Q9ULD9 1512 aaPredicted RBP18.53■□□□□ 0.56
RPL4-205ENST00000564439 ABCA10Q8WWZ4 1543 aa18.44■□□□□ 0.54
RPL4-205ENST00000564439 WDR97A6NE52 1622 aa18.44■□□□□ 0.54
RPL4-205ENST00000564439 AQRO60306 1485 aaKnown RBP eCLIP18.44■□□□□ 0.542e-11■■■■■ 79.2
RPL4-205ENST00000564439 EIF4G3O43432 1585 aaKnown RBP18.43■□□□□ 0.54
RPL4-205ENST00000564439 TDRD9Q8NDG6 1382 aaKnown RBP18.42■□□□□ 0.54
RPL4-205ENST00000564439 ABCA5Q8WWZ7 1642 aa18.34■□□□□ 0.53
RPL4-205ENST00000564439 GAPVD1Q14C86 1478 aa18.33■□□□□ 0.52
RPL4-205ENST00000564439 OSCARQ8IYS5 282 aa18.3■□□□□ 0.52
RPL4-205ENST00000564439 GRIN2BQ13224 1484 aa18.3■□□□□ 0.52
RPL4-205ENST00000564439 SNAPC4Q5SXM2 1469 aa18.26■□□□□ 0.51
RPL4-205ENST00000564439 TRIM41Q8WV44 630 aa18.25■□□□□ 0.51
RPL4-205ENST00000564439 MAGI1Q96QZ7 1491 aaPredicted RBP18.25■□□□□ 0.51
RPL4-205ENST00000564439 PBRM1Q86U86 1689 aa18.25■□□□□ 0.51
RPL4-205ENST00000564439 ERICH3Q5RHP9 1530 aa18.21■□□□□ 0.51
RPL4-205ENST00000564439 KIF27Q86VH2 1401 aa18.21■□□□□ 0.51
RPL4-205ENST00000564439 CHIC1Q5VXU3 224 aa18.19■□□□□ 0.5
RPL4-205ENST00000564439 SYNJ2O15056 1496 aa18.17■□□□□ 0.5
RPL4-205ENST00000564439 IGF1RP08069 1367 aa18.17■□□□□ 0.5
RPL4-205ENST00000564439 CHD1O14646 1710 aa18.15■□□□□ 0.5
RPL4-205ENST00000564439 ADAMTS12P58397 1594 aa18.15■□□□□ 0.5
RPL4-205ENST00000564439 FHAD1B1AJZ9 1412 aa18.13■□□□□ 0.49
RPL4-205ENST00000564439 RUSC2Q8N2Y8 1516 aa18.13■□□□□ 0.49
RPL4-205ENST00000564439 FBLN2P98095 1184 aa18.12■□□□□ 0.49
RPL4-205ENST00000564439 CHMP7Q8WUX9 453 aaPredicted RBP18.12■□□□□ 0.49
RPL4-205ENST00000564439 GRIN2AQ12879 1464 aa18.07■□□□□ 0.48
RPL4-205ENST00000564439 CUL7Q14999 1698 aa18.05■□□□□ 0.48
RPL4-205ENST00000564439 CARMIL1Q5VZK9 1371 aa18.03■□□□□ 0.48
RPL4-205ENST00000564439 NUP160Q12769 1436 aa18.02■□□□□ 0.48
RPL4-205ENST00000564439 CLASP1Q7Z460 1538 aa18.01■□□□□ 0.47
RPL4-205ENST00000564439 CEP170Q5SW79 1584 aa17.99■□□□□ 0.47
RPL4-205ENST00000564439 EEA1Q15075 1411 aa17.97■□□□□ 0.47
RPL4-205ENST00000564439 PRXQ9BXM0 1461 aa17.95■□□□□ 0.46
RPL4-205ENST00000564439 RIMBP3CA6NJZ7 1639 aa17.94■□□□□ 0.46
RPL4-205ENST00000564439 RIMBP3BA6NNM3 1639 aa17.94■□□□□ 0.46
RPL4-205ENST00000564439 RIMBP3Q9UFD9 1639 aa17.94■□□□□ 0.46
RPL4-205ENST00000564439 CSRNP3Q8WYN3 585 aa17.93■□□□□ 0.46
RPL4-205ENST00000564439 RAPGEF2Q9Y4G8 1499 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms