RNA–Protein interactions for RNA: ENST00000428029.6

LINC01089-201, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 2

Gene LINC01089, Length 1,024 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-201ENST00000428029 NISCHQ9Y2I1 1504 aa46.75■■■■■ 5.07
LINC01089-201ENST00000428029 CCDC180Q9P1Z9 1646 aa41.67■■■■■ 4.26
LINC01089-201ENST00000428029 ABCC9O60706 1549 aa40.62■■■■■ 4.09
LINC01089-201ENST00000428029 RB1CC1Q8TDY2 1594 aa39.16■■■■□ 3.86
LINC01089-201ENST00000428029 NACADO15069 1562 aa39.12■■■■□ 3.85
LINC01089-201ENST00000428029 ZCCHC6Q5VYS8 1495 aaKnown RBP39■■■■□ 3.83
LINC01089-201ENST00000428029 MYO15BQ96JP2 1530 aa38.98■■■■□ 3.83
LINC01089-201ENST00000428029 DCAF1Q9Y4B6 1507 aa38.78■■■■□ 3.8
LINC01089-201ENST00000428029 DCAF8L2P0C7V8 631 aa38.73■■■■□ 3.79
LINC01089-201ENST00000428029 UNC13AQ9UPW8 1703 aa38.31■■■■□ 3.72
LINC01089-201ENST00000428029 BICRAQ9NZM4 1560 aa38.02■■■■□ 3.68
LINC01089-201ENST00000428029 SCRIBQ14160 1630 aa37.9■■■■□ 3.66
LINC01089-201ENST00000428029 PABPN1Q86U42 306 aaKnown RBP eCLIP37.85■■■■□ 3.652e-8■■■□□ 17.5
LINC01089-201ENST00000428029 SHROOM4Q9ULL8 1493 aa37.71■■■■□ 3.63
LINC01089-201ENST00000428029 DNAJC5BQ9UF47 199 aa37.27■■■■□ 3.56
LINC01089-201ENST00000428029 EIF4G1Q04637 1599 aaKnown RBP37■■■■□ 3.51
LINC01089-201ENST00000428029 CC2D2AQ9P2K1 1620 aa36.81■■■■□ 3.48
LINC01089-201ENST00000428029 CECR2Q9BXF3 1484 aa36.53■■■■□ 3.44
LINC01089-201ENST00000428029 SMARCA4P51532 1647 aa36.31■■■■□ 3.4
LINC01089-201ENST00000428029 BAZ1AQ9NRL2 1556 aaPredicted RBP36.26■■■■□ 3.39
LINC01089-201ENST00000428029 NCAPD3P42695 1498 aa36.09■■■■□ 3.37
LINC01089-201ENST00000428029 ATAD2BQ9ULI0 1458 aa36.09■■■■□ 3.37
LINC01089-201ENST00000428029 SMARCA2P51531 1590 aa36.06■■■■□ 3.36
LINC01089-201ENST00000428029 PEG3Q9GZU2 1588 aa36.03■■■■□ 3.36
LINC01089-201ENST00000428029 MROH2BQ7Z745 1585 aa36.01■■■■□ 3.35
LINC01089-201ENST00000428029 HMGXB3Q12766 1538 aa35.97■■■■□ 3.35
LINC01089-201ENST00000428029 BAZ1BQ9UIG0 1483 aaKnown RBP35.76■■■■□ 3.32
LINC01089-201ENST00000428029 WIZO95785 1651 aa35.6■■■■□ 3.29
LINC01089-201ENST00000428029 RSF1Q96T23 1441 aaPredicted RBP35.57■■■■□ 3.29
LINC01089-201ENST00000428029 TOP2AP11388 1531 aaKnown RBP35.29■■■■□ 3.24
LINC01089-201ENST00000428029 NESP48681 1621 aa35.17■■■■□ 3.22
LINC01089-201ENST00000428029 LAMC3Q9Y6N6 1575 aa35.17■■■■□ 3.22
LINC01089-201ENST00000428029 ERCC6Q03468 1493 aa35■■■■□ 3.19
LINC01089-201ENST00000428029 CADPSQ9ULU8 1353 aa34.98■■■■□ 3.19
LINC01089-201ENST00000428029 PDS5BQ9NTI5 1447 aa34.84■■■■□ 3.17
LINC01089-201ENST00000428029 CFTRP13569 1480 aa34.83■■■■□ 3.17
LINC01089-201ENST00000428029 KIF21AQ7Z4S6 1674 aa34.81■■■■□ 3.16
LINC01089-201ENST00000428029 CCDC88BA6NC98 1476 aa34.79■■■■□ 3.16
LINC01089-201ENST00000428029 THOC2Q8NI27 1593 aaKnown RBP34.77■■■■□ 3.16
LINC01089-201ENST00000428029 CUX2O14529 1486 aa34.77■■■■□ 3.16
LINC01089-201ENST00000428029 PRDM2Q13029 1718 aa34.62■■■■□ 3.13
LINC01089-201ENST00000428029 FANCD2Q9BXW9 1451 aa34.59■■■■□ 3.13
LINC01089-201ENST00000428029 CEP164Q9UPV0 1460 aa34.57■■■■□ 3.12
LINC01089-201ENST00000428029 MRC2Q9UBG0 1479 aa34.53■■■■□ 3.12
LINC01089-201ENST00000428029 WDR62O43379 1518 aa34.48■■■■□ 3.11
LINC01089-201ENST00000428029 SUPT5HO00267 1087 aaKnown RBP34.41■■■■□ 3.1
LINC01089-201ENST00000428029 URB2Q14146 1524 aaKnown RBP34.28■■■■□ 3.08
LINC01089-201ENST00000428029 TOPBP1Q92547 1522 aa34.06■■■■□ 3.04
LINC01089-201ENST00000428029 ABCC8Q09428 1581 aa34.05■■■■□ 3.04
LINC01089-201ENST00000428029 DNMBPQ6XZF7 1577 aa34.04■■■■□ 3.04
LINC01089-201ENST00000428029 IFT140Q96RY7 1462 aa33.85■■■■□ 3.01
LINC01089-201ENST00000428029 CUX1P39880 1505 aa33.79■■■■□ 3
LINC01089-201ENST00000428029 POLA1P09884 1462 aaPredicted RBP33.77■■■■□ 3
LINC01089-201ENST00000428029 TARBP1Q13395 1621 aaKnown RBP33.74■■■□□ 2.99
LINC01089-201ENST00000428029 ZNF608Q9ULD9 1512 aaPredicted RBP33.68■■■□□ 2.98
LINC01089-201ENST00000428029 FGD5Q6ZNL6 1462 aa33.67■■■□□ 2.98
LINC01089-201ENST00000428029 EIF4G3O43432 1585 aaKnown RBP33.61■■■□□ 2.97
LINC01089-201ENST00000428029 DNAJC5Q9H3Z4 198 aa33.6■■■□□ 2.97
LINC01089-201ENST00000428029 RAD54L2Q9Y4B4 1467 aa33.56■■■□□ 2.96
LINC01089-201ENST00000428029 BIVM-ERCC5R4GMW8 1640 aa33.55■■■□□ 2.96
LINC01089-201ENST00000428029 SOGA1O94964 1423 aa33.54■■■□□ 2.96
LINC01089-201ENST00000428029 WDR97A6NE52 1622 aa33.53■■■□□ 2.96
LINC01089-201ENST00000428029 TOP2BQ02880 1626 aa33.53■■■□□ 2.96
LINC01089-201ENST00000428029 WRNQ14191 1432 aaPredicted RBP eCLIP33.53■■■□□ 2.96
LINC01089-201ENST00000428029 SYNJ1O43426 1573 aa33.5■■■□□ 2.95
LINC01089-201ENST00000428029 AQRO60306 1485 aaKnown RBP eCLIP33.43■■■□□ 2.943e-6■■■□□ 15.5
LINC01089-201ENST00000428029 ABCA10Q8WWZ4 1543 aa33.38■■■□□ 2.93
LINC01089-201ENST00000428029 TDRD9Q8NDG6 1382 aaKnown RBP33.34■■■□□ 2.93
LINC01089-201ENST00000428029 ABCA5Q8WWZ7 1642 aa33.3■■■□□ 2.92
LINC01089-201ENST00000428029 GRIN2BQ13224 1484 aa33.22■■■□□ 2.91
LINC01089-201ENST00000428029 PBRM1Q86U86 1689 aa33.2■■■□□ 2.91
LINC01089-201ENST00000428029 GAPVD1Q14C86 1478 aa33.2■■■□□ 2.91
LINC01089-201ENST00000428029 SNAPC4Q5SXM2 1469 aa33.18■■■□□ 2.9
LINC01089-201ENST00000428029 MAGI1Q96QZ7 1491 aaPredicted RBP33.18■■■□□ 2.9
LINC01089-201ENST00000428029 CHD1O14646 1710 aa33.16■■■□□ 2.9
LINC01089-201ENST00000428029 OSCARQ8IYS5 282 aa33.14■■■□□ 2.9
LINC01089-201ENST00000428029 SYNJ2O15056 1496 aa33.03■■■□□ 2.88
LINC01089-201ENST00000428029 ERICH3Q5RHP9 1530 aa32.99■■■□□ 2.87
LINC01089-201ENST00000428029 ADAMTS12P58397 1594 aa32.96■■■□□ 2.87
LINC01089-201ENST00000428029 FBLN2P98095 1184 aa32.88■■■□□ 2.85
LINC01089-201ENST00000428029 CLASP1Q7Z460 1538 aa32.87■■■□□ 2.85
LINC01089-201ENST00000428029 CHMP7Q8WUX9 453 aaPredicted RBP32.85■■■□□ 2.85
LINC01089-201ENST00000428029 FHAD1B1AJZ9 1412 aa32.84■■■□□ 2.85
LINC01089-201ENST00000428029 GRIN2AQ12879 1464 aa32.82■■■□□ 2.84
LINC01089-201ENST00000428029 KIF27Q86VH2 1401 aa32.81■■■□□ 2.84
LINC01089-201ENST00000428029 RIMBP3CA6NJZ7 1639 aa32.76■■■□□ 2.83
LINC01089-201ENST00000428029 RIMBP3BA6NNM3 1639 aa32.76■■■□□ 2.83
LINC01089-201ENST00000428029 RIMBP3Q9UFD9 1639 aa32.76■■■□□ 2.83
LINC01089-201ENST00000428029 ARHGEF11O15085 1522 aa32.75■■■□□ 2.83
LINC01089-201ENST00000428029 NUP160Q12769 1436 aa32.71■■■□□ 2.83
LINC01089-201ENST00000428029 CUL7Q14999 1698 aa32.69■■■□□ 2.82
LINC01089-201ENST00000428029 CEP170Q5SW79 1584 aa32.67■■■□□ 2.82
LINC01089-201ENST00000428029 IGF1RP08069 1367 aa32.67■■■□□ 2.82
LINC01089-201ENST00000428029 TRIM41Q8WV44 630 aa32.53■■■□□ 2.8
LINC01089-201ENST00000428029 SHROOM2Q13796 1616 aa32.5■■■□□ 2.79
LINC01089-201ENST00000428029 RUSC2Q8N2Y8 1516 aa32.5■■■□□ 2.79
LINC01089-201ENST00000428029 ARAP1Q96P48 1450 aa32.49■■■□□ 2.79
LINC01089-201ENST00000428029 CARMIL1Q5VZK9 1371 aa32.45■■■□□ 2.79
LINC01089-201ENST00000428029 KIAA0586Q9BVV6 1533 aa32.34■■■□□ 2.77
LINC01089-201ENST00000428029 ERCC6L2Q5T890 1561 aa32.33■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms