RNA–Protein interactions for RNA: ENST00000566622.5

RPL4-212, Transcript of ribosomal protein L4, humanhuman

TSL 2

Gene RPL4, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-212ENST00000566622 NISCHQ9Y2I1 1504 aa34.52■■■■□ 3.12
RPL4-212ENST00000566622 CCDC180Q9P1Z9 1646 aa30.97■■■□□ 2.55
RPL4-212ENST00000566622 ABCC9O60706 1549 aa30.94■■■□□ 2.54
RPL4-212ENST00000566622 RB1CC1Q8TDY2 1594 aa29.4■■■□□ 2.3
RPL4-212ENST00000566622 NACADO15069 1562 aa29.21■■■□□ 2.27
RPL4-212ENST00000566622 DNAJC5BQ9UF47 199 aa29.07■■■□□ 2.24
RPL4-212ENST00000566622 DCAF8L2P0C7V8 631 aa29■■■□□ 2.23
RPL4-212ENST00000566622 UNC13AQ9UPW8 1703 aa28.94■■■□□ 2.22
RPL4-212ENST00000566622 MYO15BQ96JP2 1530 aa28.8■■■□□ 2.2
RPL4-212ENST00000566622 PABPN1Q86U42 306 aaKnown RBP eCLIP28.79■■■□□ 2.2
RPL4-212ENST00000566622 BICRAQ9NZM4 1560 aa28.7■■■□□ 2.18
RPL4-212ENST00000566622 ZCCHC6Q5VYS8 1495 aaKnown RBP28.63■■■□□ 2.17
RPL4-212ENST00000566622 DCAF1Q9Y4B6 1507 aa28.47■■■□□ 2.15
RPL4-212ENST00000566622 SCRIBQ14160 1630 aa28.26■■■□□ 2.11
RPL4-212ENST00000566622 SHROOM4Q9ULL8 1493 aa28.1■■■□□ 2.09
RPL4-212ENST00000566622 CC2D2AQ9P2K1 1620 aa27.98■■■□□ 2.07
RPL4-212ENST00000566622 EIF4G1Q04637 1599 aaKnown RBP27.9■■■□□ 2.06
RPL4-212ENST00000566622 CECR2Q9BXF3 1484 aa27.83■■■□□ 2.04
RPL4-212ENST00000566622 NCAPD3P42695 1498 aa26.97■■□□□ 1.91
RPL4-212ENST00000566622 SMARCA4P51532 1647 aa26.95■■□□□ 1.91
RPL4-212ENST00000566622 ATAD2BQ9ULI0 1458 aa26.93■■□□□ 1.9
RPL4-212ENST00000566622 HMGXB3Q12766 1538 aa26.8■■□□□ 1.88
RPL4-212ENST00000566622 SMARCA2P51531 1590 aa26.8■■□□□ 1.88
RPL4-212ENST00000566622 BAZ1AQ9NRL2 1556 aaPredicted RBP26.75■■□□□ 1.87
RPL4-212ENST00000566622 PEG3Q9GZU2 1588 aa26.67■■□□□ 1.86
RPL4-212ENST00000566622 MROH2BQ7Z745 1585 aa26.66■■□□□ 1.86
RPL4-212ENST00000566622 NESP48681 1621 aa26.65■■□□□ 1.86
RPL4-212ENST00000566622 BAZ1BQ9UIG0 1483 aaKnown RBP26.63■■□□□ 1.85
RPL4-212ENST00000566622 ERCC6Q03468 1493 aa26.61■■□□□ 1.85
RPL4-212ENST00000566622 CUX2O14529 1486 aa26.56■■□□□ 1.84
RPL4-212ENST00000566622 DNAJC5Q9H3Z4 198 aa26.52■■□□□ 1.84
RPL4-212ENST00000566622 THOC2Q8NI27 1593 aaKnown RBP26.37■■□□□ 1.81
RPL4-212ENST00000566622 WIZO95785 1651 aa26.37■■□□□ 1.81
RPL4-212ENST00000566622 LAMC3Q9Y6N6 1575 aa26.37■■□□□ 1.81
RPL4-212ENST00000566622 KIF21AQ7Z4S6 1674 aa26.34■■□□□ 1.81
RPL4-212ENST00000566622 PDS5BQ9NTI5 1447 aa26.14■■□□□ 1.77
RPL4-212ENST00000566622 CADPSQ9ULU8 1353 aa26.13■■□□□ 1.77
RPL4-212ENST00000566622 RSF1Q96T23 1441 aaPredicted RBP26.06■■□□□ 1.76
RPL4-212ENST00000566622 MRC2Q9UBG0 1479 aa25.98■■□□□ 1.75
RPL4-212ENST00000566622 WDR62O43379 1518 aa25.96■■□□□ 1.75
RPL4-212ENST00000566622 TOP2AP11388 1531 aaKnown RBP25.94■■□□□ 1.74
RPL4-212ENST00000566622 CFTRP13569 1480 aa25.88■■□□□ 1.73
RPL4-212ENST00000566622 FANCD2Q9BXW9 1451 aa25.86■■□□□ 1.73
RPL4-212ENST00000566622 CEP164Q9UPV0 1460 aa25.86■■□□□ 1.73
RPL4-212ENST00000566622 URB2Q14146 1524 aaKnown RBP25.73■■□□□ 1.71
RPL4-212ENST00000566622 PRDM2Q13029 1718 aa25.71■■□□□ 1.71
RPL4-212ENST00000566622 CCDC88BA6NC98 1476 aa25.67■■□□□ 1.7
RPL4-212ENST00000566622 TOPBP1Q92547 1522 aa25.41■■□□□ 1.66
RPL4-212ENST00000566622 ZNF608Q9ULD9 1512 aaPredicted RBP25.41■■□□□ 1.66
RPL4-212ENST00000566622 TRIM41Q8WV44 630 aa25.37■■□□□ 1.65
RPL4-212ENST00000566622 IFT140Q96RY7 1462 aa25.33■■□□□ 1.65
RPL4-212ENST00000566622 DNMBPQ6XZF7 1577 aa25.31■■□□□ 1.64
RPL4-212ENST00000566622 OSCARQ8IYS5 282 aa25.3■■□□□ 1.64
RPL4-212ENST00000566622 EIF4G3O43432 1585 aaKnown RBP25.27■■□□□ 1.64
RPL4-212ENST00000566622 TARBP1Q13395 1621 aaKnown RBP25.24■■□□□ 1.63
RPL4-212ENST00000566622 ABCC8Q09428 1581 aa25.22■■□□□ 1.63
RPL4-212ENST00000566622 POLA1P09884 1462 aaPredicted RBP25.16■■□□□ 1.62
RPL4-212ENST00000566622 AQRO60306 1485 aaKnown RBP eCLIP25.15■■□□□ 1.622e-11■■■■■ 79.2
RPL4-212ENST00000566622 RIMBP3CA6NJZ7 1639 aa25.14■■□□□ 1.61
RPL4-212ENST00000566622 RIMBP3BA6NNM3 1639 aa25.14■■□□□ 1.61
RPL4-212ENST00000566622 RIMBP3Q9UFD9 1639 aa25.14■■□□□ 1.61
RPL4-212ENST00000566622 CHD1O14646 1710 aa25.11■■□□□ 1.61
RPL4-212ENST00000566622 RAD54L2Q9Y4B4 1467 aa25.09■■□□□ 1.61
RPL4-212ENST00000566622 CUX1P39880 1505 aa25.03■■□□□ 1.6
RPL4-212ENST00000566622 ARHGEF11O15085 1522 aa25.02■■□□□ 1.6
RPL4-212ENST00000566622 FGD5Q6ZNL6 1462 aa25.01■■□□□ 1.59
RPL4-212ENST00000566622 SOGA1O94964 1423 aa24.98■■□□□ 1.59
RPL4-212ENST00000566622 TDRD9Q8NDG6 1382 aaKnown RBP24.97■■□□□ 1.59
RPL4-212ENST00000566622 WDR97A6NE52 1622 aa24.92■■□□□ 1.58
RPL4-212ENST00000566622 SNAPC4Q5SXM2 1469 aa24.88■■□□□ 1.57
RPL4-212ENST00000566622 SUPT5HO00267 1087 aaKnown RBP24.86■■□□□ 1.57
RPL4-212ENST00000566622 FBLN2P98095 1184 aa24.86■■□□□ 1.57
RPL4-212ENST00000566622 ARAP1Q96P48 1450 aa24.81■■□□□ 1.56
RPL4-212ENST00000566622 PBRM1Q86U86 1689 aa24.78■■□□□ 1.56
RPL4-212ENST00000566622 CLASP1Q7Z460 1538 aa24.78■■□□□ 1.56
RPL4-212ENST00000566622 CYB5RLQ6IPT4 315 aa24.76■■□□□ 1.55
RPL4-212ENST00000566622 GRIN2BQ13224 1484 aa24.76■■□□□ 1.55
RPL4-212ENST00000566622 MAGI1Q96QZ7 1491 aaPredicted RBP24.76■■□□□ 1.55
RPL4-212ENST00000566622 ABCA5Q8WWZ7 1642 aa24.72■■□□□ 1.55
RPL4-212ENST00000566622 ABCA10Q8WWZ4 1543 aa24.7■■□□□ 1.54
RPL4-212ENST00000566622 GAPVD1Q14C86 1478 aa24.7■■□□□ 1.54
RPL4-212ENST00000566622 SYNJ2O15056 1496 aa24.69■■□□□ 1.54
RPL4-212ENST00000566622 SYNJ1O43426 1573 aa24.67■■□□□ 1.54
RPL4-212ENST00000566622 CHMP7Q8WUX9 453 aaPredicted RBP24.66■■□□□ 1.54
RPL4-212ENST00000566622 BIVM-ERCC5R4GMW8 1640 aa24.64■■□□□ 1.53
RPL4-212ENST00000566622 TOP2BQ02880 1626 aa24.61■■□□□ 1.53
RPL4-212ENST00000566622 WRNQ14191 1432 aaPredicted RBP eCLIP24.53■■□□□ 1.52
RPL4-212ENST00000566622 ADAMTS12P58397 1594 aa24.52■■□□□ 1.52
RPL4-212ENST00000566622 GRIN2AQ12879 1464 aa24.48■■□□□ 1.51
RPL4-212ENST00000566622 ERCC6L2Q5T890 1561 aa24.48■■□□□ 1.51
RPL4-212ENST00000566622 CEP170Q5SW79 1584 aa24.46■■□□□ 1.51
RPL4-212ENST00000566622 TRHP20396 242 aaPredicted RBP24.42■■□□□ 1.5
RPL4-212ENST00000566622 NUP160Q12769 1436 aa24.4■■□□□ 1.5
RPL4-212ENST00000566622 ERICH3Q5RHP9 1530 aa24.36■■□□□ 1.49
RPL4-212ENST00000566622 FHAD1B1AJZ9 1412 aa24.35■■□□□ 1.49
RPL4-212ENST00000566622 SHROOM2Q13796 1616 aa24.35■■□□□ 1.49
RPL4-212ENST00000566622 RUSC2Q8N2Y8 1516 aa24.19■■□□□ 1.46
RPL4-212ENST00000566622 PRG4Q92954 1404 aaPredicted RBP24.14■■□□□ 1.45
RPL4-212ENST00000566622 JPH4Q96JJ6 628 aa24.08■■□□□ 1.45
RPL4-212ENST00000566622 IGF1RP08069 1367 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms