RNA–Protein interactions for RNA: ENST00000592943.5

MED16-209, Transcript of mediator complex subunit 16, humanhuman

TSL 1 (best)

Gene MED16, Length 1,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED16-209ENST00000592943 NISCHQ9Y2I1 1504 aa41.26■■■■■ 4.19
MED16-209ENST00000592943 CCDC180Q9P1Z9 1646 aa36.22■■■■□ 3.39
MED16-209ENST00000592943 ZCCHC6Q5VYS8 1495 aaKnown RBP34.62■■■■□ 3.13
MED16-209ENST00000592943 ABCC9O60706 1549 aa34.29■■■■□ 3.08
MED16-209ENST00000592943 DCAF1Q9Y4B6 1507 aa34.18■■■■□ 3.06
MED16-209ENST00000592943 DCAF8L2P0C7V8 631 aa33.97■■■■□ 3.03
MED16-209ENST00000592943 MYO15BQ96JP2 1530 aa33.89■■■■□ 3.02
MED16-209ENST00000592943 NACADO15069 1562 aa33.73■■■□□ 2.99
MED16-209ENST00000592943 RB1CC1Q8TDY2 1594 aa33.5■■■□□ 2.95
MED16-209ENST00000592943 SHROOM4Q9ULL8 1493 aa33.31■■■□□ 2.92
MED16-209ENST00000592943 SCRIBQ14160 1630 aa33.14■■■□□ 2.9
MED16-209ENST00000592943 UNC13AQ9UPW8 1703 aa32.84■■■□□ 2.85
MED16-209ENST00000592943 BICRAQ9NZM4 1560 aa32.45■■■□□ 2.79
MED16-209ENST00000592943 PABPN1Q86U42 306 aaKnown RBP eCLIP32.2■■■□□ 2.75
MED16-209ENST00000592943 CECR2Q9BXF3 1484 aa32■■■□□ 2.71
MED16-209ENST00000592943 SUPT5HO00267 1087 aaKnown RBP31.93■■■□□ 2.7
MED16-209ENST00000592943 BAZ1AQ9NRL2 1556 aaPredicted RBP31.91■■■□□ 2.7
MED16-209ENST00000592943 RSF1Q96T23 1441 aaPredicted RBP31.86■■■□□ 2.69
MED16-209ENST00000592943 MROH2BQ7Z745 1585 aa31.82■■■□□ 2.68
MED16-209ENST00000592943 SMARCA4P51532 1647 aa31.8■■■□□ 2.68
MED16-209ENST00000592943 WIZO95785 1651 aa31.58■■■□□ 2.65
MED16-209ENST00000592943 EIF4G1Q04637 1599 aaKnown RBP31.5■■■□□ 2.63
MED16-209ENST00000592943 PEG3Q9GZU2 1588 aa31.45■■■□□ 2.63
MED16-209ENST00000592943 SMARCA2P51531 1590 aa31.33■■■□□ 2.61
MED16-209ENST00000592943 ATAD2BQ9ULI0 1458 aa31.29■■■□□ 2.6
MED16-209ENST00000592943 TOP2AP11388 1531 aaKnown RBP31.28■■■□□ 2.6
MED16-209ENST00000592943 BAZ1BQ9UIG0 1483 aaKnown RBP31.12■■■□□ 2.57
MED16-209ENST00000592943 CC2D2AQ9P2K1 1620 aa31.09■■■□□ 2.57
MED16-209ENST00000592943 NCAPD3P42695 1498 aa31.08■■■□□ 2.57
MED16-209ENST00000592943 HMGXB3Q12766 1538 aa31.08■■■□□ 2.57
MED16-209ENST00000592943 CCDC88BA6NC98 1476 aa30.89■■■□□ 2.53
MED16-209ENST00000592943 DNAJC5BQ9UF47 199 aa30.82■■■□□ 2.52
MED16-209ENST00000592943 CHIC1Q5VXU3 224 aa30.47■■■□□ 2.47
MED16-209ENST00000592943 CFTRP13569 1480 aa30.32■■■□□ 2.44
MED16-209ENST00000592943 PRDM2Q13029 1718 aa30.3■■■□□ 2.44
MED16-209ENST00000592943 CADPSQ9ULU8 1353 aa30.24■■■□□ 2.43
MED16-209ENST00000592943 ABCC8Q09428 1581 aa30.16■■■□□ 2.42
MED16-209ENST00000592943 LAMC3Q9Y6N6 1575 aa30.12■■■□□ 2.41
MED16-209ENST00000592943 TRIM41Q8WV44 630 aa30.09■■■□□ 2.41
MED16-209ENST00000592943 WRNQ14191 1432 aaPredicted RBP eCLIP30.02■■■□□ 2.4
MED16-209ENST00000592943 NESP48681 1621 aa30.02■■■□□ 2.4
MED16-209ENST00000592943 FANCD2Q9BXW9 1451 aa29.92■■■□□ 2.38
MED16-209ENST00000592943 SYNJ1O43426 1573 aa29.92■■■□□ 2.38
MED16-209ENST00000592943 TOP2BQ02880 1626 aa29.86■■■□□ 2.37
MED16-209ENST00000592943 BIVM-ERCC5R4GMW8 1640 aa29.86■■■□□ 2.37
MED16-209ENST00000592943 PDS5BQ9NTI5 1447 aa29.84■■■□□ 2.37
MED16-209ENST00000592943 CUX1P39880 1505 aa29.79■■■□□ 2.36
MED16-209ENST00000592943 CEP164Q9UPV0 1460 aa29.78■■■□□ 2.36
MED16-209ENST00000592943 KIF21AQ7Z4S6 1674 aa29.76■■■□□ 2.35
MED16-209ENST00000592943 DNMBPQ6XZF7 1577 aa29.66■■■□□ 2.34
MED16-209ENST00000592943 TOPBP1Q92547 1522 aa29.58■■■□□ 2.33
MED16-209ENST00000592943 URB2Q14146 1524 aaKnown RBP29.55■■■□□ 2.32
MED16-209ENST00000592943 FGD5Q6ZNL6 1462 aa29.51■■■□□ 2.31
MED16-209ENST00000592943 EEA1Q15075 1411 aa29.51■■■□□ 2.31
MED16-209ENST00000592943 SOGA1O94964 1423 aa29.5■■■□□ 2.31
MED16-209ENST00000592943 MRC2Q9UBG0 1479 aa29.49■■■□□ 2.31
MED16-209ENST00000592943 ERCC6Q03468 1493 aa29.46■■■□□ 2.31
MED16-209ENST00000592943 FAM9AQ8IZU1 332 aaPredicted RBP29.45■■■□□ 2.31
MED16-209ENST00000592943 POLA1P09884 1462 aaPredicted RBP29.41■■■□□ 2.3
MED16-209ENST00000592943 RUSC2Q8N2Y8 1516 aa29.39■■■□□ 2.3
MED16-209ENST00000592943 WDR62O43379 1518 aa29.37■■■□□ 2.29
MED16-209ENST00000592943 THOC2Q8NI27 1593 aaKnown RBP29.34■■■□□ 2.29
MED16-209ENST00000592943 KIF27Q86VH2 1401 aa29.29■■■□□ 2.28
MED16-209ENST00000592943 ABCA10Q8WWZ4 1543 aa29.27■■■□□ 2.28
MED16-209ENST00000592943 WDR97A6NE52 1622 aa29.26■■■□□ 2.27
MED16-209ENST00000592943 CSRNP3Q8WYN3 585 aa29.26■■■□□ 2.27
MED16-209ENST00000592943 CUX2O14529 1486 aa29.25■■■□□ 2.27
MED16-209ENST00000592943 RAD54L2Q9Y4B4 1467 aa29.25■■■□□ 2.27
MED16-209ENST00000592943 LOC105371045A0A1W2PR82 267 aa29.21■■■□□ 2.27
MED16-209ENST00000592943 TARBP1Q13395 1621 aaKnown RBP29.19■■■□□ 2.26
MED16-209ENST00000592943 KIF21BO75037 1637 aa29.16■■■□□ 2.26
MED16-209ENST00000592943 IFT140Q96RY7 1462 aa29.09■■■□□ 2.25
MED16-209ENST00000592943 ABCA5Q8WWZ7 1642 aa29.08■■■□□ 2.25
MED16-209ENST00000592943 GOLGA3Q08378 1498 aa29.06■■■□□ 2.24
MED16-209ENST00000592943 PRXQ9BXM0 1461 aa29.03■■■□□ 2.24
MED16-209ENST00000592943 ERICH3Q5RHP9 1530 aa29.01■■■□□ 2.23
MED16-209ENST00000592943 IGF1RP08069 1367 aa29■■■□□ 2.23
MED16-209ENST00000592943 EHMT2Q96KQ7 1210 aa28.99■■■□□ 2.23
MED16-209ENST00000592943 GAPVD1Q14C86 1478 aa28.98■■■□□ 2.23
MED16-209ENST00000592943 TDRD9Q8NDG6 1382 aaKnown RBP28.97■■■□□ 2.23
MED16-209ENST00000592943 CUL7Q14999 1698 aa28.94■■■□□ 2.22
MED16-209ENST00000592943 RAPGEF2Q9Y4G8 1499 aa28.94■■■□□ 2.22
MED16-209ENST00000592943 PBRM1Q86U86 1689 aa28.92■■■□□ 2.22
MED16-209ENST00000592943 TNIKQ9UKE5 1360 aa28.89■■■□□ 2.22
MED16-209ENST00000592943 ZNF608Q9ULD9 1512 aaPredicted RBP28.87■■■□□ 2.21
MED16-209ENST00000592943 CARMIL1Q5VZK9 1371 aa28.87■■■□□ 2.21
MED16-209ENST00000592943 EIF4G3O43432 1585 aaKnown RBP28.86■■■□□ 2.21
MED16-209ENST00000592943 AQRO60306 1485 aaKnown RBP eCLIP28.85■■■□□ 2.212e-6■■■■□ 25.8
MED16-209ENST00000592943 UBTFP17480 764 aaKnown RBP28.84■■■□□ 2.21
MED16-209ENST00000592943 GRIN2BQ13224 1484 aa28.81■■■□□ 2.2
MED16-209ENST00000592943 ADAMTS12P58397 1594 aa28.72■■■□□ 2.19
MED16-209ENST00000592943 CEP162Q5TB80 1403 aa28.71■■■□□ 2.19
MED16-209ENST00000592943 FHAD1B1AJZ9 1412 aa28.67■■■□□ 2.18
MED16-209ENST00000592943 SNAPC4Q5SXM2 1469 aa28.62■■■□□ 2.17
MED16-209ENST00000592943 MAGI1Q96QZ7 1491 aaPredicted RBP28.62■■■□□ 2.17
MED16-209ENST00000592943 CTTNBP2Q8WZ74 1663 aa28.6■■■□□ 2.17
MED16-209ENST00000592943 CLIP1P30622 1438 aa28.54■■■□□ 2.16
MED16-209ENST00000592943 SYNJ2O15056 1496 aa28.49■■■□□ 2.15
MED16-209ENST00000592943 GRIN2AQ12879 1464 aa28.45■■■□□ 2.15
MED16-209ENST00000592943 RANGAP1P46060 587 aaPredicted RBP28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms