RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 NISCHQ9Y2I1 1504 aa49.46■■■■■ 5.51
OTUB1-211ENST00000543004 CCDC180Q9P1Z9 1646 aa43.65■■■■■ 4.58
OTUB1-211ENST00000543004 ABCC9O60706 1549 aa42.23■■■■■ 4.35
OTUB1-211ENST00000543004 ZCCHC6Q5VYS8 1495 aaKnown RBP41.33■■■■■ 4.21
OTUB1-211ENST00000543004 DCAF8L2P0C7V8 631 aa41.18■■■■■ 4.18
OTUB1-211ENST00000543004 NACADO15069 1562 aa40.87■■■■■ 4.13
OTUB1-211ENST00000543004 DCAF1Q9Y4B6 1507 aa40.86■■■■■ 4.13
OTUB1-211ENST00000543004 RB1CC1Q8TDY2 1594 aa40.78■■■■■ 4.12
OTUB1-211ENST00000543004 MYO15BQ96JP2 1530 aa40.76■■■■■ 4.12
OTUB1-211ENST00000543004 UNC13AQ9UPW8 1703 aa40.05■■■■■ 4
OTUB1-211ENST00000543004 SCRIBQ14160 1630 aa40.02■■■■■ 4
OTUB1-211ENST00000543004 BICRAQ9NZM4 1560 aa39.63■■■■□ 3.94
OTUB1-211ENST00000543004 SHROOM4Q9ULL8 1493 aa39.62■■■■□ 3.93
OTUB1-211ENST00000543004 PABPN1Q86U42 306 aaKnown RBP eCLIP39.6■■■■□ 3.938e-7■■■■□ 25.6
OTUB1-211ENST00000543004 CECR2Q9BXF3 1484 aa38.56■■■■□ 3.76
OTUB1-211ENST00000543004 EIF4G1Q04637 1599 aaKnown RBP38.5■■■■□ 3.75
OTUB1-211ENST00000543004 SMARCA4P51532 1647 aa38.28■■■■□ 3.72
OTUB1-211ENST00000543004 BAZ1AQ9NRL2 1556 aaPredicted RBP38.26■■■■□ 3.72
OTUB1-211ENST00000543004 DNAJC5BQ9UF47 199 aa38.24■■■■□ 3.71
OTUB1-211ENST00000543004 CC2D2AQ9P2K1 1620 aa38.21■■■■□ 3.71
OTUB1-211ENST00000543004 MROH2BQ7Z745 1585 aa38.21■■■■□ 3.71
OTUB1-211ENST00000543004 RSF1Q96T23 1441 aaPredicted RBP37.95■■■■□ 3.67
OTUB1-211ENST00000543004 ATAD2BQ9ULI0 1458 aa37.88■■■■□ 3.65
OTUB1-211ENST00000543004 WIZO95785 1651 aa37.87■■■■□ 3.65
OTUB1-211ENST00000543004 PEG3Q9GZU2 1588 aa37.82■■■■□ 3.65
OTUB1-211ENST00000543004 SMARCA2P51531 1590 aa37.81■■■■□ 3.64
OTUB1-211ENST00000543004 NCAPD3P42695 1498 aa37.71■■■■□ 3.63
OTUB1-211ENST00000543004 BAZ1BQ9UIG0 1483 aaKnown RBP37.59■■■■□ 3.61
OTUB1-211ENST00000543004 HMGXB3Q12766 1538 aa37.58■■■■□ 3.61
OTUB1-211ENST00000543004 SUPT5HO00267 1087 aaKnown RBP37.55■■■■□ 3.6
OTUB1-211ENST00000543004 TOP2AP11388 1531 aaKnown RBP37.38■■■■□ 3.58
OTUB1-211ENST00000543004 CCDC88BA6NC98 1476 aa36.99■■■■□ 3.51
OTUB1-211ENST00000543004 NESP48681 1621 aa36.77■■■■□ 3.48
OTUB1-211ENST00000543004 CADPSQ9ULU8 1353 aa36.66■■■■□ 3.46
OTUB1-211ENST00000543004 LAMC3Q9Y6N6 1575 aa36.62■■■■□ 3.45
OTUB1-211ENST00000543004 CFTRP13569 1480 aa36.59■■■■□ 3.45
OTUB1-211ENST00000543004 PRDM2Q13029 1718 aa36.42■■■■□ 3.42
OTUB1-211ENST00000543004 KIF21AQ7Z4S6 1674 aa36.35■■■■□ 3.41
OTUB1-211ENST00000543004 PDS5BQ9NTI5 1447 aa36.32■■■■□ 3.41
OTUB1-211ENST00000543004 FANCD2Q9BXW9 1451 aa36.28■■■■□ 3.4
OTUB1-211ENST00000543004 ERCC6Q03468 1493 aa36.27■■■■□ 3.4
OTUB1-211ENST00000543004 CEP164Q9UPV0 1460 aa36.15■■■■□ 3.38
OTUB1-211ENST00000543004 THOC2Q8NI27 1593 aaKnown RBP36.01■■■■□ 3.35
OTUB1-211ENST00000543004 MRC2Q9UBG0 1479 aa35.96■■■■□ 3.35
OTUB1-211ENST00000543004 URB2Q14146 1524 aaKnown RBP35.92■■■■□ 3.34
OTUB1-211ENST00000543004 ABCC8Q09428 1581 aa35.92■■■■□ 3.34
OTUB1-211ENST00000543004 WDR62O43379 1518 aa35.84■■■■□ 3.33
OTUB1-211ENST00000543004 CUX1P39880 1505 aa35.78■■■■□ 3.32
OTUB1-211ENST00000543004 TOPBP1Q92547 1522 aa35.78■■■■□ 3.32
OTUB1-211ENST00000543004 DNMBPQ6XZF7 1577 aa35.77■■■■□ 3.32
OTUB1-211ENST00000543004 WRNQ14191 1432 aaPredicted RBP eCLIP35.74■■■■□ 3.31
OTUB1-211ENST00000543004 SYNJ1O43426 1573 aa35.71■■■■□ 3.31
OTUB1-211ENST00000543004 TOP2BQ02880 1626 aa35.61■■■■□ 3.29
OTUB1-211ENST00000543004 BIVM-ERCC5R4GMW8 1640 aa35.61■■■■□ 3.29
OTUB1-211ENST00000543004 CUX2O14529 1486 aa35.59■■■■□ 3.29
OTUB1-211ENST00000543004 FGD5Q6ZNL6 1462 aa35.55■■■■□ 3.28
OTUB1-211ENST00000543004 POLA1P09884 1462 aaPredicted RBP35.53■■■■□ 3.28
OTUB1-211ENST00000543004 RAD54L2Q9Y4B4 1467 aa35.42■■■■□ 3.26
OTUB1-211ENST00000543004 CHIC1Q5VXU3 224 aa35.38■■■■□ 3.25
OTUB1-211ENST00000543004 SOGA1O94964 1423 aa35.38■■■■□ 3.25
OTUB1-211ENST00000543004 TARBP1Q13395 1621 aaKnown RBP35.37■■■■□ 3.25
OTUB1-211ENST00000543004 TRIM41Q8WV44 630 aa35.35■■■■□ 3.25
OTUB1-211ENST00000543004 IFT140Q96RY7 1462 aa35.34■■■■□ 3.25
OTUB1-211ENST00000543004 ZNF608Q9ULD9 1512 aaPredicted RBP35.25■■■■□ 3.23
OTUB1-211ENST00000543004 WDR97A6NE52 1622 aa35.24■■■■□ 3.23
OTUB1-211ENST00000543004 ABCA10Q8WWZ4 1543 aa35.18■■■■□ 3.22
OTUB1-211ENST00000543004 TDRD9Q8NDG6 1382 aaKnown RBP35.15■■■■□ 3.22
OTUB1-211ENST00000543004 AQRO60306 1485 aaKnown RBP eCLIP35.12■■■■□ 3.213e-10■■■■■ 44.3
OTUB1-211ENST00000543004 EIF4G3O43432 1585 aaKnown RBP35.11■■■■□ 3.21
OTUB1-211ENST00000543004 ABCA5Q8WWZ7 1642 aa35.04■■■■□ 3.2
OTUB1-211ENST00000543004 GAPVD1Q14C86 1478 aa34.97■■■■□ 3.19
OTUB1-211ENST00000543004 RUSC2Q8N2Y8 1516 aa34.96■■■■□ 3.19
OTUB1-211ENST00000543004 PBRM1Q86U86 1689 aa34.93■■■■□ 3.18
OTUB1-211ENST00000543004 KIF27Q86VH2 1401 aa34.9■■■■□ 3.18
OTUB1-211ENST00000543004 GRIN2BQ13224 1484 aa34.85■■■■□ 3.17
OTUB1-211ENST00000543004 SNAPC4Q5SXM2 1469 aa34.78■■■■□ 3.16
OTUB1-211ENST00000543004 ERICH3Q5RHP9 1530 aa34.75■■■■□ 3.15
OTUB1-211ENST00000543004 FAM9AQ8IZU1 332 aaPredicted RBP34.73■■■■□ 3.15
OTUB1-211ENST00000543004 IGF1RP08069 1367 aa34.73■■■■□ 3.15
OTUB1-211ENST00000543004 MAGI1Q96QZ7 1491 aaPredicted RBP34.67■■■■□ 3.14
OTUB1-211ENST00000543004 ADAMTS12P58397 1594 aa34.64■■■■□ 3.14
OTUB1-211ENST00000543004 CHD1O14646 1710 aa34.6■■■■□ 3.13
OTUB1-211ENST00000543004 EEA1Q15075 1411 aa34.6■■■■□ 3.13
OTUB1-211ENST00000543004 CUL7Q14999 1698 aa34.58■■■■□ 3.13
OTUB1-211ENST00000543004 FBLN2P98095 1184 aa34.57■■■■□ 3.12
OTUB1-211ENST00000543004 SYNJ2O15056 1496 aa34.56■■■■□ 3.12
OTUB1-211ENST00000543004 CSRNP3Q8WYN3 585 aa34.55■■■■□ 3.12
OTUB1-211ENST00000543004 FHAD1B1AJZ9 1412 aa34.55■■■■□ 3.12
OTUB1-211ENST00000543004 CARMIL1Q5VZK9 1371 aa34.52■■■■□ 3.12
OTUB1-211ENST00000543004 CHMP7Q8WUX9 453 aaPredicted RBP34.51■■■■□ 3.11
OTUB1-211ENST00000543004 GRIN2AQ12879 1464 aa34.44■■■■□ 3.1
OTUB1-211ENST00000543004 PRXQ9BXM0 1461 aa34.43■■■■□ 3.1
OTUB1-211ENST00000543004 RAPGEF2Q9Y4G8 1499 aa34.38■■■■□ 3.09
OTUB1-211ENST00000543004 EHMT2Q96KQ7 1210 aa34.32■■■■□ 3.08
OTUB1-211ENST00000543004 CEP170Q5SW79 1584 aa34.3■■■■□ 3.08
OTUB1-211ENST00000543004 KIF21BO75037 1637 aa34.29■■■■□ 3.08
OTUB1-211ENST00000543004 OSCARQ8IYS5 282 aa34.27■■■■□ 3.08
OTUB1-211ENST00000543004 NUP160Q12769 1436 aa34.23■■■■□ 3.07
OTUB1-211ENST00000543004 CLASP1Q7Z460 1538 aa34.14■■■■□ 3.06
OTUB1-211ENST00000543004 GOLGA3Q08378 1498 aa34.12■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms