RNA–Protein interactions for RNA: ENST00000591594.5

TMC6-219, Transcript of transmembrane channel like 6, humanhuman

TSL 3

Gene TMC6, Length 614 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-219ENST00000591594 NISCHQ9Y2I1 1504 aa41.18■■■■■ 4.18
TMC6-219ENST00000591594 CCDC180Q9P1Z9 1646 aa36.74■■■■□ 3.47
TMC6-219ENST00000591594 ABCC9O60706 1549 aa36.22■■■■□ 3.39
TMC6-219ENST00000591594 RB1CC1Q8TDY2 1594 aa34.71■■■■□ 3.15
TMC6-219ENST00000591594 DCAF8L2P0C7V8 631 aa34.59■■■■□ 3.13
TMC6-219ENST00000591594 NACADO15069 1562 aa34.57■■■■□ 3.13
TMC6-219ENST00000591594 ZCCHC6Q5VYS8 1495 aaKnown RBP34.27■■■■□ 3.08
TMC6-219ENST00000591594 MYO15BQ96JP2 1530 aa34.24■■■■□ 3.07
TMC6-219ENST00000591594 DCAF1Q9Y4B6 1507 aa34.02■■■■□ 3.04
TMC6-219ENST00000591594 UNC13AQ9UPW8 1703 aa33.93■■■■□ 3.02
TMC6-219ENST00000591594 PABPN1Q86U42 306 aaKnown RBP eCLIP33.78■■■■□ 31e-10■□□□□ 9.7
TMC6-219ENST00000591594 BICRAQ9NZM4 1560 aa33.63■■■□□ 2.97
TMC6-219ENST00000591594 SCRIBQ14160 1630 aa33.57■■■□□ 2.97
TMC6-219ENST00000591594 DNAJC5BQ9UF47 199 aa33.36■■■□□ 2.93
TMC6-219ENST00000591594 SHROOM4Q9ULL8 1493 aa33.24■■■□□ 2.91
TMC6-219ENST00000591594 EIF4G1Q04637 1599 aaKnown RBP32.79■■■□□ 2.84
TMC6-219ENST00000591594 CC2D2AQ9P2K1 1620 aa32.73■■■□□ 2.83
TMC6-219ENST00000591594 CECR2Q9BXF3 1484 aa32.54■■■□□ 2.8
TMC6-219ENST00000591594 SMARCA4P51532 1647 aa32.04■■■□□ 2.72
TMC6-219ENST00000591594 BAZ1AQ9NRL2 1556 aaPredicted RBP31.96■■■□□ 2.71
TMC6-219ENST00000591594 ATAD2BQ9ULI0 1458 aa31.89■■■□□ 2.7
TMC6-219ENST00000591594 NCAPD3P42695 1498 aa31.87■■■□□ 2.69
TMC6-219ENST00000591594 SMARCA2P51531 1590 aa31.86■■■□□ 2.69
TMC6-219ENST00000591594 MROH2BQ7Z745 1585 aa31.75■■■□□ 2.67
TMC6-219ENST00000591594 HMGXB3Q12766 1538 aa31.74■■■□□ 2.67
TMC6-219ENST00000591594 PEG3Q9GZU2 1588 aa31.67■■■□□ 2.66
TMC6-219ENST00000591594 BAZ1BQ9UIG0 1483 aaKnown RBP31.66■■■□□ 2.66
TMC6-219ENST00000591594 WIZO95785 1651 aa31.43■■■□□ 2.62
TMC6-219ENST00000591594 RSF1Q96T23 1441 aaPredicted RBP31.27■■■□□ 2.6
TMC6-219ENST00000591594 ERCC6Q03468 1493 aa31.27■■■□□ 2.6
TMC6-219ENST00000591594 NESP48681 1621 aa31.25■■■□□ 2.59
TMC6-219ENST00000591594 LAMC3Q9Y6N6 1575 aa31.13■■■□□ 2.57
TMC6-219ENST00000591594 TOP2AP11388 1531 aaKnown RBP31.07■■■□□ 2.56
TMC6-219ENST00000591594 CADPSQ9ULU8 1353 aa30.96■■■□□ 2.55
TMC6-219ENST00000591594 CUX2O14529 1486 aa30.95■■■□□ 2.54
TMC6-219ENST00000591594 PDS5BQ9NTI5 1447 aa30.91■■■□□ 2.54
TMC6-219ENST00000591594 KIF21AQ7Z4S6 1674 aa30.9■■■□□ 2.54
TMC6-219ENST00000591594 THOC2Q8NI27 1593 aaKnown RBP30.83■■■□□ 2.53
TMC6-219ENST00000591594 CFTRP13569 1480 aa30.72■■■□□ 2.51
TMC6-219ENST00000591594 CCDC88BA6NC98 1476 aa30.67■■■□□ 2.5
TMC6-219ENST00000591594 FANCD2Q9BXW9 1451 aa30.64■■■□□ 2.5
TMC6-219ENST00000591594 CEP164Q9UPV0 1460 aa30.64■■■□□ 2.5
TMC6-219ENST00000591594 MRC2Q9UBG0 1479 aa30.63■■■□□ 2.49
TMC6-219ENST00000591594 PRDM2Q13029 1718 aa30.54■■■□□ 2.48
TMC6-219ENST00000591594 WDR62O43379 1518 aa30.53■■■□□ 2.48
TMC6-219ENST00000591594 SUPT5HO00267 1087 aaKnown RBP30.39■■■□□ 2.46
TMC6-219ENST00000591594 URB2Q14146 1524 aaKnown RBP30.33■■■□□ 2.45
TMC6-219ENST00000591594 DNAJC5Q9H3Z4 198 aa30.22■■■□□ 2.43
TMC6-219ENST00000591594 TOPBP1Q92547 1522 aa30.12■■■□□ 2.41
TMC6-219ENST00000591594 ABCC8Q09428 1581 aa30.07■■■□□ 2.4
TMC6-219ENST00000591594 DNMBPQ6XZF7 1577 aa30.07■■■□□ 2.4
TMC6-219ENST00000591594 IFT140Q96RY7 1462 aa29.99■■■□□ 2.39
TMC6-219ENST00000591594 ZNF608Q9ULD9 1512 aaPredicted RBP29.88■■■□□ 2.37
TMC6-219ENST00000591594 POLA1P09884 1462 aaPredicted RBP29.85■■■□□ 2.37
TMC6-219ENST00000591594 CUX1P39880 1505 aa29.8■■■□□ 2.36
TMC6-219ENST00000591594 TARBP1Q13395 1621 aaKnown RBP29.79■■■□□ 2.36
TMC6-219ENST00000591594 EIF4G3O43432 1585 aaKnown RBP29.79■■■□□ 2.36
TMC6-219ENST00000591594 FGD5Q6ZNL6 1462 aa29.76■■■□□ 2.35
TMC6-219ENST00000591594 RAD54L2Q9Y4B4 1467 aa29.74■■■□□ 2.35
TMC6-219ENST00000591594 SOGA1O94964 1423 aa29.71■■■□□ 2.35
TMC6-219ENST00000591594 AQRO60306 1485 aaKnown RBP eCLIP29.68■■■□□ 2.346e-16■■■■■ 36.8
TMC6-219ENST00000591594 OSCARQ8IYS5 282 aa29.61■■■□□ 2.33
TMC6-219ENST00000591594 TDRD9Q8NDG6 1382 aaKnown RBP29.59■■■□□ 2.33
TMC6-219ENST00000591594 WDR97A6NE52 1622 aa29.55■■■□□ 2.32
TMC6-219ENST00000591594 WRNQ14191 1432 aaPredicted RBP eCLIP29.54■■■□□ 2.32
TMC6-219ENST00000591594 BIVM-ERCC5R4GMW8 1640 aa29.49■■■□□ 2.31
TMC6-219ENST00000591594 SYNJ1O43426 1573 aa29.49■■■□□ 2.31
TMC6-219ENST00000591594 TOP2BQ02880 1626 aa29.49■■■□□ 2.31
TMC6-219ENST00000591594 CHD1O14646 1710 aa29.47■■■□□ 2.31
TMC6-219ENST00000591594 SNAPC4Q5SXM2 1469 aa29.43■■■□□ 2.3
TMC6-219ENST00000591594 FBLN2P98095 1184 aa29.43■■■□□ 2.3
TMC6-219ENST00000591594 ABCA10Q8WWZ4 1543 aa29.42■■■□□ 2.3
TMC6-219ENST00000591594 GRIN2BQ13224 1484 aa29.4■■■□□ 2.3
TMC6-219ENST00000591594 PBRM1Q86U86 1689 aa29.38■■■□□ 2.29
TMC6-219ENST00000591594 GAPVD1Q14C86 1478 aa29.38■■■□□ 2.29
TMC6-219ENST00000591594 ABCA5Q8WWZ7 1642 aa29.35■■■□□ 2.29
TMC6-219ENST00000591594 MAGI1Q96QZ7 1491 aaPredicted RBP29.35■■■□□ 2.29
TMC6-219ENST00000591594 CHMP7Q8WUX9 453 aaPredicted RBP29.27■■■□□ 2.28
TMC6-219ENST00000591594 TRIM41Q8WV44 630 aa29.26■■■□□ 2.27
TMC6-219ENST00000591594 SYNJ2O15056 1496 aa29.24■■■□□ 2.27
TMC6-219ENST00000591594 RIMBP3CA6NJZ7 1639 aa29.22■■■□□ 2.27
TMC6-219ENST00000591594 RIMBP3BA6NNM3 1639 aa29.22■■■□□ 2.27
TMC6-219ENST00000591594 RIMBP3Q9UFD9 1639 aa29.22■■■□□ 2.27
TMC6-219ENST00000591594 ARHGEF11O15085 1522 aa29.17■■■□□ 2.26
TMC6-219ENST00000591594 ADAMTS12P58397 1594 aa29.11■■■□□ 2.25
TMC6-219ENST00000591594 CLASP1Q7Z460 1538 aa29.09■■■□□ 2.25
TMC6-219ENST00000591594 ERICH3Q5RHP9 1530 aa29.08■■■□□ 2.25
TMC6-219ENST00000591594 GRIN2AQ12879 1464 aa29.04■■■□□ 2.24
TMC6-219ENST00000591594 FHAD1B1AJZ9 1412 aa29.02■■■□□ 2.24
TMC6-219ENST00000591594 KIF27Q86VH2 1401 aa28.94■■■□□ 2.22
TMC6-219ENST00000591594 ARAP1Q96P48 1450 aa28.91■■■□□ 2.22
TMC6-219ENST00000591594 CYB5RLQ6IPT4 315 aa28.91■■■□□ 2.22
TMC6-219ENST00000591594 CEP170Q5SW79 1584 aa28.91■■■□□ 2.22
TMC6-219ENST00000591594 NUP160Q12769 1436 aa28.87■■■□□ 2.21
TMC6-219ENST00000591594 CUL7Q14999 1698 aa28.8■■■□□ 2.2
TMC6-219ENST00000591594 IGF1RP08069 1367 aa28.79■■■□□ 2.2
TMC6-219ENST00000591594 SHROOM2Q13796 1616 aa28.7■■■□□ 2.19
TMC6-219ENST00000591594 RUSC2Q8N2Y8 1516 aa28.69■■■□□ 2.18
TMC6-219ENST00000591594 ERCC6L2Q5T890 1561 aa28.69■■■□□ 2.18
TMC6-219ENST00000591594 CARMIL1Q5VZK9 1371 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms