RNA–Protein interactions for RNA: ENST00000392467.7

TMC6-203, Transcript of transmembrane channel like 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC6, Length 2,833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-203ENST00000392467 NISCHQ9Y2I1 1504 aa37.1■■■■□ 3.53
TMC6-203ENST00000392467 CCDC180Q9P1Z9 1646 aa31.95■■■□□ 2.7
TMC6-203ENST00000392467 SHROOM4Q9ULL8 1493 aa31.69■■■□□ 2.66
TMC6-203ENST00000392467 SUPT5HO00267 1087 aaKnown RBP31.34■■■□□ 2.61
TMC6-203ENST00000392467 ZCCHC6Q5VYS8 1495 aaKnown RBP31.28■■■□□ 2.6
TMC6-203ENST00000392467 DCAF8L2P0C7V8 631 aa30.68■■■□□ 2.5
TMC6-203ENST00000392467 DCAF1Q9Y4B6 1507 aa30.55■■■□□ 2.48
TMC6-203ENST00000392467 MYO15BQ96JP2 1530 aa30.53■■■□□ 2.48
TMC6-203ENST00000392467 HRCP23327 699 aa30.51■■■□□ 2.47
TMC6-203ENST00000392467 CHIC1Q5VXU3 224 aa30.43■■■□□ 2.46
TMC6-203ENST00000392467 PCGF6Q9BYE7 350 aa30.38■■■□□ 2.45
TMC6-203ENST00000392467 PPARGC1BQ86YN6 1023 aaKnown RBP30.2■■■□□ 2.42
TMC6-203ENST00000392467 ABCC9O60706 1549 aa29.96■■■□□ 2.39
TMC6-203ENST00000392467 LOC105371045A0A1W2PR82 267 aa29.86■■■□□ 2.37
TMC6-203ENST00000392467 SCRIBQ14160 1630 aa29.68■■■□□ 2.34
TMC6-203ENST00000392467 NACADO15069 1562 aa29.66■■■□□ 2.34
TMC6-203ENST00000392467 TRIM26Q12899 539 aaPredicted RBP29.33■■■□□ 2.29
TMC6-203ENST00000392467 RB1CC1Q8TDY2 1594 aa29.29■■■□□ 2.28
TMC6-203ENST00000392467 EHMT2Q96KQ7 1210 aa29.1■■■□□ 2.25
TMC6-203ENST00000392467 RSF1Q96T23 1441 aaPredicted RBP29.07■■■□□ 2.24
TMC6-203ENST00000392467 FAM9AQ8IZU1 332 aaPredicted RBP29.06■■■□□ 2.24
TMC6-203ENST00000392467 CECR2Q9BXF3 1484 aa28.92■■■□□ 2.22
TMC6-203ENST00000392467 TRIM41Q8WV44 630 aa28.89■■■□□ 2.22
TMC6-203ENST00000392467 UNC13AQ9UPW8 1703 aa28.83■■■□□ 2.21
TMC6-203ENST00000392467 MROH2BQ7Z745 1585 aa28.77■■■□□ 2.2
TMC6-203ENST00000392467 ZEB1P37275 1124 aaPredicted RBP28.76■■■□□ 2.2
TMC6-203ENST00000392467 SCAF1Q9H7N4 1312 aaKnown RBP28.66■■■□□ 2.18
TMC6-203ENST00000392467 WIZO95785 1651 aa28.57■■■□□ 2.16
TMC6-203ENST00000392467 BAZ1AQ9NRL2 1556 aaPredicted RBP28.56■■■□□ 2.16
TMC6-203ENST00000392467 BICRAQ9NZM4 1560 aa28.51■■■□□ 2.15
TMC6-203ENST00000392467 PABPN1Q86U42 306 aaKnown RBP eCLIP28.45■■■□□ 2.154e-7■□□□□ 10.3
TMC6-203ENST00000392467 SMARCA4P51532 1647 aa28.4■■■□□ 2.14
TMC6-203ENST00000392467 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.38■■■□□ 2.13
TMC6-203ENST00000392467 PELP1Q8IZL8 1130 aaKnown RBP28.35■■■□□ 2.13
TMC6-203ENST00000392467 TTBK1Q5TCY1 1321 aaPredicted RBP28.26■■■□□ 2.11
TMC6-203ENST00000392467 CCER1Q8TC90 406 aaPredicted RBP28.23■■■□□ 2.11
TMC6-203ENST00000392467 TOP2AP11388 1531 aaKnown RBP28.18■■■□□ 2.1
TMC6-203ENST00000392467 NEUROD1Q13562 356 aa28.11■■■□□ 2.09
TMC6-203ENST00000392467 ACIN1Q9UKV3 1341 aaKnown RBP28.05■■■□□ 2.08
TMC6-203ENST00000392467 CCDC88BA6NC98 1476 aa27.99■■■□□ 2.07
TMC6-203ENST00000392467 SMARCA2P51531 1590 aa27.99■■■□□ 2.07
TMC6-203ENST00000392467 EIF4G1Q04637 1599 aaKnown RBP27.98■■■□□ 2.07
TMC6-203ENST00000392467 PEG3Q9GZU2 1588 aa27.96■■■□□ 2.07
TMC6-203ENST00000392467 DIEXFQ68CQ4 756 aaKnown RBP27.94■■■□□ 2.06
TMC6-203ENST00000392467 GTF3C3Q9Y5Q9 886 aa27.91■■■□□ 2.06
TMC6-203ENST00000392467 ATAD2BQ9ULI0 1458 aa27.82■■■□□ 2.04
TMC6-203ENST00000392467 CENPBP07199 599 aaPredicted RBP27.73■■■□□ 2.03
TMC6-203ENST00000392467 BAZ1BQ9UIG0 1483 aaKnown RBP27.68■■■□□ 2.02
TMC6-203ENST00000392467 ABCC8Q09428 1581 aa27.66■■■□□ 2.02
TMC6-203ENST00000392467 YTHDC1Q96MU7 727 aaKnown RBP27.66■■■□□ 2.02
TMC6-203ENST00000392467 CEP162Q5TB80 1403 aa27.56■■■□□ 2
TMC6-203ENST00000392467 UBTFP17480 764 aaKnown RBP27.54■■■□□ 2
TMC6-203ENST00000392467 SOGA1O94964 1423 aa27.52■■■□□ 2
TMC6-203ENST00000392467 ZNF316A6NFI3 1004 aaPredicted RBP27.46■■□□□ 1.99
TMC6-203ENST00000392467 NCAPD3P42695 1498 aa27.43■■□□□ 1.98
TMC6-203ENST00000392467 WRNQ14191 1432 aaPredicted RBP eCLIP27.43■■□□□ 1.98
TMC6-203ENST00000392467 HNRNPUL2Q1KMD3 747 aaKnown RBP27.41■■□□□ 1.98
TMC6-203ENST00000392467 HMGXB3Q12766 1538 aa27.4■■□□□ 1.98
TMC6-203ENST00000392467 RUSC2Q8N2Y8 1516 aa27.39■■□□□ 1.98
TMC6-203ENST00000392467 CSRNP3Q8WYN3 585 aa27.35■■□□□ 1.97
TMC6-203ENST00000392467 MIER1Q8N108 512 aa27.33■■□□□ 1.97
TMC6-203ENST00000392467 TNIKQ9UKE5 1360 aa27.33■■□□□ 1.97
TMC6-203ENST00000392467 RANGAP1P46060 587 aaPredicted RBP27.24■■□□□ 1.95
TMC6-203ENST00000392467 SYNJ1O43426 1573 aa27.22■■□□□ 1.95
TMC6-203ENST00000392467 EEA1Q15075 1411 aa27.1■■□□□ 1.93
TMC6-203ENST00000392467 GOLGA3Q08378 1498 aa27.07■■□□□ 1.92
TMC6-203ENST00000392467 CC2D2AQ9P2K1 1620 aa27.06■■□□□ 1.92
TMC6-203ENST00000392467 CFTRP13569 1480 aa27.01■■□□□ 1.91
TMC6-203ENST00000392467 TOP2BQ02880 1626 aa26.98■■□□□ 1.91
TMC6-203ENST00000392467 MYT1Q01538 1121 aa26.96■■□□□ 1.91
TMC6-203ENST00000392467 APLP2Q06481 763 aa26.95■■□□□ 1.9
TMC6-203ENST00000392467 CLIP1P30622 1438 aa26.93■■□□□ 1.9
TMC6-203ENST00000392467 BIVM-ERCC5R4GMW8 1640 aa26.92■■□□□ 1.9
TMC6-203ENST00000392467 CUX1P39880 1505 aa26.84■■□□□ 1.89
TMC6-203ENST00000392467 CEP164Q9UPV0 1460 aa26.82■■□□□ 1.88
TMC6-203ENST00000392467 CADPSQ9ULU8 1353 aa26.81■■□□□ 1.88
TMC6-203ENST00000392467 PRDM2Q13029 1718 aa26.8■■□□□ 1.88
TMC6-203ENST00000392467 VPS8Q8N3P4 1428 aa26.77■■□□□ 1.88
TMC6-203ENST00000392467 KIF21BO75037 1637 aa26.77■■□□□ 1.88
TMC6-203ENST00000392467 RAPGEF2Q9Y4G8 1499 aa26.74■■□□□ 1.87
TMC6-203ENST00000392467 SUPT16HQ9Y5B9 1047 aaKnown RBP26.63■■□□□ 1.85
TMC6-203ENST00000392467 DHX57Q6P158 1386 aaKnown RBP26.59■■□□□ 1.85
TMC6-203ENST00000392467 KANK4Q5T7N3 995 aaPredicted RBP26.59■■□□□ 1.85
TMC6-203ENST00000392467 ITGAEP38570 1179 aa26.57■■□□□ 1.84
TMC6-203ENST00000392467 KIF27Q86VH2 1401 aa26.54■■□□□ 1.84
TMC6-203ENST00000392467 FANCD2Q9BXW9 1451 aa26.53■■□□□ 1.84
TMC6-203ENST00000392467 PRXQ9BXM0 1461 aa26.53■■□□□ 1.84
TMC6-203ENST00000392467 NESP48681 1621 aa26.51■■□□□ 1.83
TMC6-203ENST00000392467 KCNH8Q96L42 1107 aa26.48■■□□□ 1.83
TMC6-203ENST00000392467 ERICH3Q5RHP9 1530 aa26.47■■□□□ 1.83
TMC6-203ENST00000392467 FGD5Q6ZNL6 1462 aa26.45■■□□□ 1.82
TMC6-203ENST00000392467 DNAJC5BQ9UF47 199 aa26.45■■□□□ 1.82
TMC6-203ENST00000392467 CUX2O14529 1486 aa26.4■■□□□ 1.82
TMC6-203ENST00000392467 BCANQ96GW7 911 aa26.38■■□□□ 1.81
TMC6-203ENST00000392467 CLSPNQ9HAW4 1339 aa26.37■■□□□ 1.81
TMC6-203ENST00000392467 LAMC3Q9Y6N6 1575 aa26.37■■□□□ 1.81
TMC6-203ENST00000392467 TSHZ2Q9NRE2 1034 aa26.36■■□□□ 1.81
TMC6-203ENST00000392467 ARAP1Q96P48 1450 aa26.34■■□□□ 1.81
TMC6-203ENST00000392467 DNMBPQ6XZF7 1577 aa26.34■■□□□ 1.81
TMC6-203ENST00000392467 TOPBP1Q92547 1522 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms