Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 ORMDL3-208ENST00000584220 414 ntTSL 1 (best) BASIC9.76□□□□□ -0.855e-9■□□□□ 10.9
RPS3P23396 C10orf10-202ENST00000448778 613 ntTSL 312.76□□□□□ -0.376e-7■□□□□ 10.9
RPS3P23396 PTPRF-212ENST00000477970 3321 ntTSL 212.14□□□□□ -0.474e-7■□□□□ 10.9
RPS3P23396 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.97□□□□□ -0.171e-9■□□□□ 10.9
RPS3P23396 EWSR1-217ENST00000483415 3231 ntTSL 1 (best)10.58□□□□□ -0.721e-9■□□□□ 10.9
RPS3P23396 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.132e-7■□□□□ 10.9
RPS3P23396 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.373e-6■□□□□ 10.9
RPS3P23396 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.88■□□□□ 0.133e-6■□□□□ 10.9
RPS3P23396 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.163e-6■□□□□ 10.9
RPS3P23396 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.99□□□□□ -0.173e-6■□□□□ 10.9
RPS3P23396 INSIG1-204ENST00000425172 596 ntTSL 223.18■■□□□ 1.32e-23■□□□□ 10.9
RPS3P23396 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.3■□□□□ 0.522e-23■□□□□ 10.9
RPS3P23396 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.07■□□□□ 0.322e-23■□□□□ 10.9
RPS3P23396 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 02e-23■□□□□ 10.9
RPS3P23396 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.024e-6■□□□□ 10.9
RPS3P23396 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.084e-6■□□□□ 10.9
RPS3P23396 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC12.36□□□□□ -0.434e-6■□□□□ 10.9
RPS3P23396 KDM3A-205ENST00000441719 8741 ntTSL 210.17□□□□□ -0.784e-6■□□□□ 10.9
RPS3P23396 KDM3A-202ENST00000409064 4621 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.874e-6■□□□□ 10.9
RPS3P23396 ELAC2-205ENST00000465825 2793 ntTSL 215.77■□□□□ 0.122e-6■□□□□ 10.9
RPS3P23396 RPN1-205ENST00000490166 573 ntTSL 33.71□□□□□ -1.821e-10■□□□□ 10.9
RPS3P23396 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC6.97□□□□□ -1.292e-20■□□□□ 10.9
RPS3P23396 HSP90AA1-204ENST00000554401 1710 ntTSL 1 (best)8.46□□□□□ -1.053e-7■□□□□ 10.9
RPS3P23396 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.94■■□□□ 1.741e-8■□□□□ 10.9
RPS3P23396 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.611e-8■□□□□ 10.9
RPS3P23396 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.556e-10■□□□□ 10.9
RPS3P23396 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.56■■□□□ 1.366e-10■□□□□ 10.9
RPS3P23396 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.56■■□□□ 1.366e-10■□□□□ 10.9
RPS3P23396 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.56■■□□□ 1.366e-10■□□□□ 10.9
RPS3P23396 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.54■■□□□ 1.365e-10■□□□□ 10.9
RPS3P23396 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.365e-10■□□□□ 10.9
RPS3P23396 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.45■■□□□ 1.345e-10■□□□□ 10.9
RPS3P23396 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.916e-10■□□□□ 10.9
RPS3P23396 C20orf24-206ENST00000492721 1044 ntTSL 220.66■□□□□ 0.95e-10■□□□□ 10.9
RPS3P23396 C20orf24-204ENST00000483815 1170 ntTSL 1 (best)17.27■□□□□ 0.365e-10■□□□□ 10.9
RPS3P23396 SLC25A6-202ENST00000475167 900 ntTSL 215.9■□□□□ 0.146e-10■□□□□ 10.9
RPS3P23396 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.15e-10■□□□□ 10.9
RPS3P23396 HNRNPM-216ENST00000602219 1809 nt14.06□□□□□ -0.161e-14■□□□□ 10.9
RPS3P23396 SLC25A6-203ENST00000484026 854 ntTSL 512.86□□□□□ -0.356e-10■□□□□ 10.9
RPS3P23396 MPC1-205ENST00000487218 918 ntTSL 55.24□□□□□ -1.576e-10■□□□□ 10.9
RPS3P23396 MPC1-204ENST00000475708 651 ntTSL 51.93□□□□□ -2.16e-10■□□□□ 10.9
RPS3P23396 ST6GAL1-222ENST00000487031 592 ntTSL 419.56■□□□□ 0.726e-9■□□□□ 10.9
RPS3P23396 SND1-202ENST00000461056 555 ntTSL 48.04□□□□□ -1.126e-8■□□□□ 10.9
RPS3P23396 C4A-254ENST00000480795 570 ntTSL 212.91□□□□□ -0.344e-11■□□□□ 10.9
RPS3P23396 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.199e-8■□□□□ 10.9
RPS3P23396 SNRNP40-203ENST00000463988 677 ntTSL 213.83□□□□□ -0.29e-8■□□□□ 10.9
RPS3P23396 AK2-207ENST00000482191 599 ntTSL 213.12□□□□□ -0.319e-8■□□□□ 10.9
RPS3P23396 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.329e-8■□□□□ 10.9
RPS3P23396 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC12.81□□□□□ -0.369e-8■□□□□ 10.9
RPS3P23396 NUP214-211ENST00000498010 483 ntTSL 512.04□□□□□ -0.489e-8■□□□□ 10.9
RPS3P23396 NRDC-212ENST00000497358 700 ntTSL 39.42□□□□□ -0.99e-8■□□□□ 10.9
RPS3P23396 NRDC-203ENST00000440943 1660 ntTSL 57.46□□□□□ -1.229e-8■□□□□ 10.9
RPS3P23396 NRDC-210ENST00000485608 3149 ntTSL 26.93□□□□□ -1.39e-8■□□□□ 10.9
RPS3P23396 HMGCR-211ENST00000512053 465 ntTSL 26.82□□□□□ -1.324e-23■□□□□ 10.9
RPS3P23396 NUP214-221ENST00000530491 502 ntTSL 35.95□□□□□ -1.469e-8■□□□□ 10.9
RPS3P23396 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.499e-8■□□□□ 10.9
RPS3P23396 CAND1-204ENST00000540319 2786 ntTSL 23.09□□□□□ -1.919e-8■□□□□ 10.9
RPS3P23396 CAND1-207ENST00000544619 4091 ntTSL 1 (best)2.42□□□□□ -2.029e-8■□□□□ 10.9
RPS3P23396 NRDC-207ENST00000475310 1025 ntTSL 22.12□□□□□ -2.079e-8■□□□□ 10.9
RPS3P23396 TGFBR3-208ENST00000529608 785 ntTSL 58.01□□□□□ -1.139e-14■□□□□ 10.9
RPS3P23396 NME4-209ENST00000460297 1652 ntTSL 524■■□□□ 1.431e-8■□□□□ 10.9
RPS3P23396 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.53■■□□□ 1.21e-8■□□□□ 10.9
RPS3P23396 NME4-204ENST00000433358 966 ntTSL 322.48■■□□□ 1.191e-8■□□□□ 10.9
RPS3P23396 NME4-206ENST00000448828 1167 ntTSL 221.9■■□□□ 1.11e-8■□□□□ 10.9
RPS3P23396 ABHD12-204ENST00000461204 712 ntTSL 321.7■■□□□ 1.061e-8■□□□□ 10.9
RPS3P23396 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.961e-8■□□□□ 10.9
RPS3P23396 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.03■□□□□ 0.961e-8■□□□□ 10.9
RPS3P23396 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.03■□□□□ 0.961e-8■□□□□ 10.9
RPS3P23396 TSPAN4-219ENST00000530404 818 ntTSL 519.79■□□□□ 0.761e-8■□□□□ 10.9
RPS3P23396 NME4-205ENST00000444498 1111 ntTSL 318.19■□□□□ 0.51e-8■□□□□ 10.9
RPS3P23396 TSPAN4-216ENST00000526055 469 ntTSL 217.91■□□□□ 0.461e-8■□□□□ 10.9
RPS3P23396 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.42■□□□□ 0.221e-8■□□□□ 10.9
RPS3P23396 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.221e-8■□□□□ 10.9
RPS3P23396 TSPAN4-213ENST00000524895 401 ntTSL 415.66■□□□□ 0.11e-8■□□□□ 10.9
RPS3P23396 DHX30-212ENST00000474183 963 ntTSL 213.96□□□□□ -0.171e-8■□□□□ 10.9
RPS3P23396 NME4-203ENST00000397722 1232 ntTSL 2 BASIC13.77□□□□□ -0.211e-8■□□□□ 10.9
RPS3P23396 NME4-208ENST00000454619 719 ntTSL 513.52□□□□□ -0.251e-8■□□□□ 10.9
RPS3P23396 DGAT1-203ENST00000524965 1336 ntTSL 512.63□□□□□ -0.391e-7■□□□□ 10.9
RPS3P23396 TMC6-209ENST00000588087 2384 ntTSL 221.11■□□□□ 0.972e-6■□□□□ 10.9
RPS3P23396 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.59■□□□□ 0.892e-6■□□□□ 10.9
RPS3P23396 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.51■□□□□ 0.712e-6■□□□□ 10.9
RPS3P23396 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.332e-6■□□□□ 10.9
RPS3P23396 TMC6-224ENST00000593044 3070 ntTSL 215.82■□□□□ 0.122e-6■□□□□ 10.9
RPS3P23396 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.032e-6■□□□□ 10.9
RPS3P23396 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.91□□□□□ -1.32e-6■□□□□ 10.8
RPS3P23396 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.62□□□□□ -1.352e-6■□□□□ 10.8
RPS3P23396 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.36□□□□□ -1.392e-6■□□□□ 10.8
RPS3P23396 USP10-208ENST00000563386 590 ntTSL 418.37■□□□□ 0.531e-7■□□□□ 10.8
RPS3P23396 USP10-205ENST00000562743 888 ntTSL 217.72■□□□□ 0.431e-7■□□□□ 10.8
RPS3P23396 USP10-203ENST00000562092 254 ntTSL 517.62■□□□□ 0.411e-7■□□□□ 10.8
RPS3P23396 USP10-210ENST00000563892 570 ntTSL 317.62■□□□□ 0.411e-7■□□□□ 10.8
RPS3P23396 USP10-216ENST00000569511 571 ntTSL 517.62■□□□□ 0.411e-7■□□□□ 10.8
RPS3P23396 USP10-211ENST00000564566 561 ntTSL 416.06■□□□□ 0.161e-7■□□□□ 10.8
RPS3P23396 USP10-204ENST00000562283 569 ntTSL 415.23■□□□□ 0.031e-7■□□□□ 10.8
RPS3P23396 USP10-207ENST00000563048 1315 ntTSL 211.4□□□□□ -0.581e-7■□□□□ 10.8
RPS3P23396 USP10-215ENST00000569038 730 ntTSL 39.34□□□□□ -0.911e-7■□□□□ 10.8
RPS3P23396 USP10-218ENST00000570053 502 ntTSL 32.3□□□□□ -2.041e-7■□□□□ 10.8
RPS3P23396 P4HB-213ENST00000484286 759 ntTSL 214.61□□□□□ -0.071e-22■□□□□ 10.8
RPS3P23396 HNRNPU-217ENST00000638952 5678 ntTSL 516.86■□□□□ 0.294e-14■□□□□ 10.8
RPS3P23396 HNRNPU-228ENST00000640306 2917 ntTSL 516.05■□□□□ 0.164e-14■□□□□ 10.8
Retrieved 100 of 24,271 protein–RNA pairs in 337.5 ms