RNA–Protein interactions for RNA: ENST00000564566.1

USP10-211, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 4

Gene USP10, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-211ENST00000564566 NISCHQ9Y2I1 1504 aa42.9■■■■■ 4.46
USP10-211ENST00000564566 ABCC9O60706 1549 aa38.94■■■■□ 3.82
USP10-211ENST00000564566 CCDC180Q9P1Z9 1646 aa38.66■■■■□ 3.78
USP10-211ENST00000564566 RB1CC1Q8TDY2 1594 aa36.91■■■■□ 3.5
USP10-211ENST00000564566 DNAJC5BQ9UF47 199 aa36.64■■■■□ 3.46
USP10-211ENST00000564566 NACADO15069 1562 aa36.56■■■■□ 3.44
USP10-211ENST00000564566 DCAF8L2P0C7V8 631 aa36.39■■■■□ 3.42
USP10-211ENST00000564566 PABPN1Q86U42 306 aaKnown RBP eCLIP36.17■■■■□ 3.38
USP10-211ENST00000564566 UNC13AQ9UPW8 1703 aa36.14■■■■□ 3.38
USP10-211ENST00000564566 MYO15BQ96JP2 1530 aa35.9■■■■□ 3.34
USP10-211ENST00000564566 BICRAQ9NZM4 1560 aa35.83■■■■□ 3.33
USP10-211ENST00000564566 ZCCHC6Q5VYS8 1495 aaKnown RBP35.52■■■■□ 3.28
USP10-211ENST00000564566 DCAF1Q9Y4B6 1507 aa35.37■■■■□ 3.25
USP10-211ENST00000564566 SCRIBQ14160 1630 aa35.28■■■■□ 3.24
USP10-211ENST00000564566 SHROOM4Q9ULL8 1493 aa35.27■■■■□ 3.24
USP10-211ENST00000564566 CC2D2AQ9P2K1 1620 aa35.15■■■■□ 3.22
USP10-211ENST00000564566 CECR2Q9BXF3 1484 aa35.06■■■■□ 3.2
USP10-211ENST00000564566 EIF4G1Q04637 1599 aaKnown RBP35■■■■□ 3.19
USP10-211ENST00000564566 DNAJC5Q9H3Z4 198 aa33.8■■■■□ 3
USP10-211ENST00000564566 NCAPD3P42695 1498 aa33.7■■■□□ 2.99
USP10-211ENST00000564566 ERCC6Q03468 1493 aa33.64■■■□□ 2.98
USP10-211ENST00000564566 ATAD2BQ9ULI0 1458 aa33.62■■■□□ 2.97
USP10-211ENST00000564566 CUX2O14529 1486 aa33.6■■■□□ 2.97
USP10-211ENST00000564566 SMARCA4P51532 1647 aa33.57■■■□□ 2.97
USP10-211ENST00000564566 SMARCA2P51531 1590 aa33.53■■■□□ 2.96
USP10-211ENST00000564566 HMGXB3Q12766 1538 aa33.5■■■□□ 2.95
USP10-211ENST00000564566 NESP48681 1621 aa33.36■■■□□ 2.93
USP10-211ENST00000564566 BAZ1AQ9NRL2 1556 aaPredicted RBP33.34■■■□□ 2.93
USP10-211ENST00000564566 BAZ1BQ9UIG0 1483 aaKnown RBP33.33■■■□□ 2.93
USP10-211ENST00000564566 PEG3Q9GZU2 1588 aa33.18■■■□□ 2.9
USP10-211ENST00000564566 MROH2BQ7Z745 1585 aa33.09■■■□□ 2.89
USP10-211ENST00000564566 THOC2Q8NI27 1593 aaKnown RBP33.09■■■□□ 2.89
USP10-211ENST00000564566 LAMC3Q9Y6N6 1575 aa33.06■■■□□ 2.88
USP10-211ENST00000564566 KIF21AQ7Z4S6 1674 aa32.97■■■□□ 2.87
USP10-211ENST00000564566 PDS5BQ9NTI5 1447 aa32.85■■■□□ 2.85
USP10-211ENST00000564566 WIZO95785 1651 aa32.72■■■□□ 2.83
USP10-211ENST00000564566 CADPSQ9ULU8 1353 aa32.7■■■□□ 2.82
USP10-211ENST00000564566 MRC2Q9UBG0 1479 aa32.62■■■□□ 2.81
USP10-211ENST00000564566 WDR62O43379 1518 aa32.55■■■□□ 2.8
USP10-211ENST00000564566 CEP164Q9UPV0 1460 aa32.46■■■□□ 2.79
USP10-211ENST00000564566 FANCD2Q9BXW9 1451 aa32.38■■■□□ 2.77
USP10-211ENST00000564566 TRIM41Q8WV44 630 aa32.36■■■□□ 2.77
USP10-211ENST00000564566 CFTRP13569 1480 aa32.27■■■□□ 2.76
USP10-211ENST00000564566 RSF1Q96T23 1441 aaPredicted RBP32.26■■■□□ 2.76
USP10-211ENST00000564566 TOP2AP11388 1531 aaKnown RBP32.26■■■□□ 2.75
USP10-211ENST00000564566 URB2Q14146 1524 aaKnown RBP32.13■■■□□ 2.73
USP10-211ENST00000564566 PRDM2Q13029 1718 aa32.06■■■□□ 2.72
USP10-211ENST00000564566 OSCARQ8IYS5 282 aa31.98■■■□□ 2.71
USP10-211ENST00000564566 CCDC88BA6NC98 1476 aa31.87■■■□□ 2.69
USP10-211ENST00000564566 ZNF608Q9ULD9 1512 aaPredicted RBP31.79■■■□□ 2.68
USP10-211ENST00000564566 IFT140Q96RY7 1462 aa31.78■■■□□ 2.68
USP10-211ENST00000564566 TOPBP1Q92547 1522 aa31.74■■■□□ 2.67
USP10-211ENST00000564566 RIMBP3CA6NJZ7 1639 aa31.7■■■□□ 2.66
USP10-211ENST00000564566 RIMBP3BA6NNM3 1639 aa31.7■■■□□ 2.66
USP10-211ENST00000564566 RIMBP3Q9UFD9 1639 aa31.7■■■□□ 2.66
USP10-211ENST00000564566 EIF4G3O43432 1585 aaKnown RBP31.65■■■□□ 2.66
USP10-211ENST00000564566 DNMBPQ6XZF7 1577 aa31.62■■■□□ 2.65
USP10-211ENST00000564566 ABCC8Q09428 1581 aa31.6■■■□□ 2.65
USP10-211ENST00000564566 ARHGEF11O15085 1522 aa31.54■■■□□ 2.64
USP10-211ENST00000564566 CHD1O14646 1710 aa31.49■■■□□ 2.63
USP10-211ENST00000564566 TARBP1Q13395 1621 aaKnown RBP31.48■■■□□ 2.63
USP10-211ENST00000564566 AQRO60306 1485 aaKnown RBP eCLIP31.46■■■□□ 2.634e-6■■□□□ 14.3
USP10-211ENST00000564566 POLA1P09884 1462 aaPredicted RBP31.4■■■□□ 2.62
USP10-211ENST00000564566 FBLN2P98095 1184 aa31.34■■■□□ 2.61
USP10-211ENST00000564566 RAD54L2Q9Y4B4 1467 aa31.3■■■□□ 2.6
USP10-211ENST00000564566 CYB5RLQ6IPT4 315 aa31.3■■■□□ 2.6
USP10-211ENST00000564566 SOGA1O94964 1423 aa31.23■■■□□ 2.59
USP10-211ENST00000564566 ARAP1Q96P48 1450 aa31.22■■■□□ 2.59
USP10-211ENST00000564566 TDRD9Q8NDG6 1382 aaKnown RBP31.22■■■□□ 2.59
USP10-211ENST00000564566 FGD5Q6ZNL6 1462 aa31.19■■■□□ 2.58
USP10-211ENST00000564566 SNAPC4Q5SXM2 1469 aa31.16■■■□□ 2.58
USP10-211ENST00000564566 WDR97A6NE52 1622 aa31.11■■■□□ 2.57
USP10-211ENST00000564566 CUX1P39880 1505 aa31.1■■■□□ 2.57
USP10-211ENST00000564566 TRHP20396 242 aaPredicted RBP31.09■■■□□ 2.57
USP10-211ENST00000564566 CLASP1Q7Z460 1538 aa31.03■■■□□ 2.56
USP10-211ENST00000564566 SYNJ1O43426 1573 aa31.02■■■□□ 2.56
USP10-211ENST00000564566 MAGI1Q96QZ7 1491 aaPredicted RBP31.01■■■□□ 2.56
USP10-211ENST00000564566 CHMP7Q8WUX9 453 aaPredicted RBP31.01■■■□□ 2.55
USP10-211ENST00000564566 GRIN2BQ13224 1484 aa31■■■□□ 2.55
USP10-211ENST00000564566 PBRM1Q86U86 1689 aa30.96■■■□□ 2.55
USP10-211ENST00000564566 SYNJ2O15056 1496 aa30.93■■■□□ 2.54
USP10-211ENST00000564566 GAPVD1Q14C86 1478 aa30.86■■■□□ 2.53
USP10-211ENST00000564566 ABCA5Q8WWZ7 1642 aa30.8■■■□□ 2.52
USP10-211ENST00000564566 ABCA10Q8WWZ4 1543 aa30.78■■■□□ 2.52
USP10-211ENST00000564566 SUPT5HO00267 1087 aaKnown RBP30.73■■■□□ 2.51
USP10-211ENST00000564566 GRIN2AQ12879 1464 aa30.61■■■□□ 2.49
USP10-211ENST00000564566 ADAMTS12P58397 1594 aa30.61■■■□□ 2.49
USP10-211ENST00000564566 WRNQ14191 1432 aaPredicted RBP eCLIP30.6■■■□□ 2.49
USP10-211ENST00000564566 ERCC6L2Q5T890 1561 aa30.58■■■□□ 2.49
USP10-211ENST00000564566 BIVM-ERCC5R4GMW8 1640 aa30.56■■■□□ 2.48
USP10-211ENST00000564566 CEP170Q5SW79 1584 aa30.55■■■□□ 2.48
USP10-211ENST00000564566 TOP2BQ02880 1626 aa30.54■■■□□ 2.48
USP10-211ENST00000564566 NUP160Q12769 1436 aa30.47■■■□□ 2.47
USP10-211ENST00000564566 FHAD1B1AJZ9 1412 aa30.44■■■□□ 2.46
USP10-211ENST00000564566 SHROOM2Q13796 1616 aa30.41■■■□□ 2.46
USP10-211ENST00000564566 ERICH3Q5RHP9 1530 aa30.39■■■□□ 2.46
USP10-211ENST00000564566 AEBP2Q6ZN18 517 aaPredicted RBP30.36■■■□□ 2.45
USP10-211ENST00000564566 PRG4Q92954 1404 aaPredicted RBP30.24■■■□□ 2.43
USP10-211ENST00000564566 RUSC2Q8N2Y8 1516 aa30.19■■■□□ 2.42
USP10-211ENST00000564566 KIF13AQ9H1H9 1805 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms