RNA–Protein interactions for RNA: ENST00000480795.1

C4A-254, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-254ENST00000480795 NISCHQ9Y2I1 1504 aa32.5■■■□□ 2.79
C4A-254ENST00000480795 CCDC180Q9P1Z9 1646 aa29.03■■■□□ 2.24
C4A-254ENST00000480795 ABCC9O60706 1549 aa28.28■■■□□ 2.12
C4A-254ENST00000480795 RB1CC1Q8TDY2 1594 aa27.31■■□□□ 1.96
C4A-254ENST00000480795 NACADO15069 1562 aa27.29■■□□□ 1.96
C4A-254ENST00000480795 MYO15BQ96JP2 1530 aa27.2■■□□□ 1.94
C4A-254ENST00000480795 ZCCHC6Q5VYS8 1495 aaKnown RBP27.06■■□□□ 1.92
C4A-254ENST00000480795 DCAF1Q9Y4B6 1507 aa27■■□□□ 1.91
C4A-254ENST00000480795 DCAF8L2P0C7V8 631 aa26.92■■□□□ 1.9
C4A-254ENST00000480795 UNC13AQ9UPW8 1703 aa26.71■■□□□ 1.87
C4A-254ENST00000480795 BICRAQ9NZM4 1560 aa26.47■■□□□ 1.83
C4A-254ENST00000480795 PABPN1Q86U42 306 aaKnown RBP eCLIP26.34■■□□□ 1.81
C4A-254ENST00000480795 SHROOM4Q9ULL8 1493 aa26.33■■□□□ 1.81
C4A-254ENST00000480795 SCRIBQ14160 1630 aa26.28■■□□□ 1.8
C4A-254ENST00000480795 DNAJC5BQ9UF47 199 aa26.04■■□□□ 1.76
C4A-254ENST00000480795 EIF4G1Q04637 1599 aaKnown RBP25.77■■□□□ 1.72
C4A-254ENST00000480795 CC2D2AQ9P2K1 1620 aa25.67■■□□□ 1.7
C4A-254ENST00000480795 CECR2Q9BXF3 1484 aa25.48■■□□□ 1.67
C4A-254ENST00000480795 SMARCA4P51532 1647 aa25.23■■□□□ 1.63
C4A-254ENST00000480795 BAZ1AQ9NRL2 1556 aaPredicted RBP25.21■■□□□ 1.63
C4A-254ENST00000480795 NCAPD3P42695 1498 aa25.16■■□□□ 1.62
C4A-254ENST00000480795 SMARCA2P51531 1590 aa25.12■■□□□ 1.61
C4A-254ENST00000480795 ATAD2BQ9ULI0 1458 aa25.11■■□□□ 1.61
C4A-254ENST00000480795 PEG3Q9GZU2 1588 aa25.09■■□□□ 1.61
C4A-254ENST00000480795 HMGXB3Q12766 1538 aa25.05■■□□□ 1.6
C4A-254ENST00000480795 MROH2BQ7Z745 1585 aa24.98■■□□□ 1.59
C4A-254ENST00000480795 BAZ1BQ9UIG0 1483 aaKnown RBP24.86■■□□□ 1.57
C4A-254ENST00000480795 WIZO95785 1651 aa24.71■■□□□ 1.55
C4A-254ENST00000480795 RSF1Q96T23 1441 aaPredicted RBP24.67■■□□□ 1.54
C4A-254ENST00000480795 LAMC3Q9Y6N6 1575 aa24.53■■□□□ 1.52
C4A-254ENST00000480795 TOP2AP11388 1531 aaKnown RBP24.49■■□□□ 1.51
C4A-254ENST00000480795 NESP48681 1621 aa24.45■■□□□ 1.5
C4A-254ENST00000480795 ERCC6Q03468 1493 aa24.4■■□□□ 1.5
C4A-254ENST00000480795 CADPSQ9ULU8 1353 aa24.38■■□□□ 1.49
C4A-254ENST00000480795 PDS5BQ9NTI5 1447 aa24.32■■□□□ 1.48
C4A-254ENST00000480795 CUX2O14529 1486 aa24.32■■□□□ 1.48
C4A-254ENST00000480795 CFTRP13569 1480 aa24.24■■□□□ 1.47
C4A-254ENST00000480795 KIF21AQ7Z4S6 1674 aa24.24■■□□□ 1.47
C4A-254ENST00000480795 THOC2Q8NI27 1593 aaKnown RBP24.21■■□□□ 1.47
C4A-254ENST00000480795 CCDC88BA6NC98 1476 aa24.15■■□□□ 1.46
C4A-254ENST00000480795 PRDM2Q13029 1718 aa24.13■■□□□ 1.45
C4A-254ENST00000480795 FANCD2Q9BXW9 1451 aa24.07■■□□□ 1.44
C4A-254ENST00000480795 CEP164Q9UPV0 1460 aa24.06■■□□□ 1.44
C4A-254ENST00000480795 MRC2Q9UBG0 1479 aa24.05■■□□□ 1.44
C4A-254ENST00000480795 WDR62O43379 1518 aa24.02■■□□□ 1.44
C4A-254ENST00000480795 URB2Q14146 1524 aaKnown RBP23.83■■□□□ 1.41
C4A-254ENST00000480795 SUPT5HO00267 1087 aaKnown RBP23.78■■□□□ 1.4
C4A-254ENST00000480795 ABCC8Q09428 1581 aa23.77■■□□□ 1.4
C4A-254ENST00000480795 TOPBP1Q92547 1522 aa23.69■■□□□ 1.38
C4A-254ENST00000480795 DNMBPQ6XZF7 1577 aa23.68■■□□□ 1.38
C4A-254ENST00000480795 DNAJC5Q9H3Z4 198 aa23.62■■□□□ 1.37
C4A-254ENST00000480795 IFT140Q96RY7 1462 aa23.58■■□□□ 1.37
C4A-254ENST00000480795 POLA1P09884 1462 aaPredicted RBP23.48■■□□□ 1.35
C4A-254ENST00000480795 TARBP1Q13395 1621 aaKnown RBP23.48■■□□□ 1.35
C4A-254ENST00000480795 CUX1P39880 1505 aa23.44■■□□□ 1.34
C4A-254ENST00000480795 ZNF608Q9ULD9 1512 aaPredicted RBP23.4■■□□□ 1.34
C4A-254ENST00000480795 WDR97A6NE52 1622 aa23.4■■□□□ 1.34
C4A-254ENST00000480795 FGD5Q6ZNL6 1462 aa23.37■■□□□ 1.33
C4A-254ENST00000480795 EIF4G3O43432 1585 aaKnown RBP23.37■■□□□ 1.33
C4A-254ENST00000480795 SOGA1O94964 1423 aa23.34■■□□□ 1.33
C4A-254ENST00000480795 RAD54L2Q9Y4B4 1467 aa23.3■■□□□ 1.32
C4A-254ENST00000480795 BIVM-ERCC5R4GMW8 1640 aa23.3■■□□□ 1.32
C4A-254ENST00000480795 TOP2BQ02880 1626 aa23.28■■□□□ 1.32
C4A-254ENST00000480795 WRNQ14191 1432 aaPredicted RBP eCLIP23.26■■□□□ 1.31
C4A-254ENST00000480795 AQRO60306 1485 aaKnown RBP eCLIP23.25■■□□□ 1.318e-7■■■■■ 26.8
C4A-254ENST00000480795 ABCA10Q8WWZ4 1543 aa23.22■■□□□ 1.31
C4A-254ENST00000480795 OSCARQ8IYS5 282 aa23.2■■□□□ 1.3
C4A-254ENST00000480795 SYNJ1O43426 1573 aa23.19■■□□□ 1.3
C4A-254ENST00000480795 TDRD9Q8NDG6 1382 aaKnown RBP23.17■■□□□ 1.3
C4A-254ENST00000480795 ABCA5Q8WWZ7 1642 aa23.13■■□□□ 1.29
C4A-254ENST00000480795 GRIN2BQ13224 1484 aa23.12■■□□□ 1.29
C4A-254ENST00000480795 MAGI1Q96QZ7 1491 aaPredicted RBP23.11■■□□□ 1.29
C4A-254ENST00000480795 CHD1O14646 1710 aa23.1■■□□□ 1.29
C4A-254ENST00000480795 GAPVD1Q14C86 1478 aa23.1■■□□□ 1.29
C4A-254ENST00000480795 PBRM1Q86U86 1689 aa23.09■■□□□ 1.29
C4A-254ENST00000480795 SNAPC4Q5SXM2 1469 aa23.05■■□□□ 1.28
C4A-254ENST00000480795 SYNJ2O15056 1496 aa23■■□□□ 1.27
C4A-254ENST00000480795 ERICH3Q5RHP9 1530 aa22.96■■□□□ 1.27
C4A-254ENST00000480795 CHMP7Q8WUX9 453 aaPredicted RBP22.91■■□□□ 1.26
C4A-254ENST00000480795 ADAMTS12P58397 1594 aa22.89■■□□□ 1.26
C4A-254ENST00000480795 FBLN2P98095 1184 aa22.89■■□□□ 1.25
C4A-254ENST00000480795 CLASP1Q7Z460 1538 aa22.88■■□□□ 1.25
C4A-254ENST00000480795 RIMBP3CA6NJZ7 1639 aa22.86■■□□□ 1.25
C4A-254ENST00000480795 RIMBP3BA6NNM3 1639 aa22.86■■□□□ 1.25
C4A-254ENST00000480795 RIMBP3Q9UFD9 1639 aa22.86■■□□□ 1.25
C4A-254ENST00000480795 FHAD1B1AJZ9 1412 aa22.85■■□□□ 1.25
C4A-254ENST00000480795 ARHGEF11O15085 1522 aa22.85■■□□□ 1.25
C4A-254ENST00000480795 GRIN2AQ12879 1464 aa22.83■■□□□ 1.25
C4A-254ENST00000480795 KIF27Q86VH2 1401 aa22.8■■□□□ 1.24
C4A-254ENST00000480795 NUP160Q12769 1436 aa22.76■■□□□ 1.23
C4A-254ENST00000480795 CUL7Q14999 1698 aa22.73■■□□□ 1.23
C4A-254ENST00000480795 IGF1RP08069 1367 aa22.71■■□□□ 1.23
C4A-254ENST00000480795 CEP170Q5SW79 1584 aa22.7■■□□□ 1.22
C4A-254ENST00000480795 SHROOM2Q13796 1616 aa22.64■■□□□ 1.22
C4A-254ENST00000480795 ARAP1Q96P48 1450 aa22.64■■□□□ 1.21
C4A-254ENST00000480795 TRIM41Q8WV44 630 aa22.61■■□□□ 1.21
C4A-254ENST00000480795 RUSC2Q8N2Y8 1516 aa22.56■■□□□ 1.2
C4A-254ENST00000480795 CARMIL1Q5VZK9 1371 aa22.55■■□□□ 1.2
C4A-254ENST00000480795 CYB5RLQ6IPT4 315 aa22.53■■□□□ 1.2
C4A-254ENST00000480795 KIAA0586Q9BVV6 1533 aa22.52■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms