RNA–Protein interactions for RNA: ENST00000515768.5

CSNK1A1-207, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CSNK1A1, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-207ENST00000515768 AEBP2Q6ZN18 517 aaPredicted RBP32.83■■■□□ 2.85
CSNK1A1-207ENST00000515768 CHIC1Q5VXU3 224 aa32.07■■■□□ 2.72
CSNK1A1-207ENST00000515768 PHF23Q9BUL5 403 aaPredicted RBP28.25■■■□□ 2.11
CSNK1A1-207ENST00000515768 SENP3Q9H4L4 574 aaPredicted RBP27.8■■■□□ 2.04
CSNK1A1-207ENST00000515768 PLPPR3Q6T4P5 718 aa26.04■■□□□ 1.76
CSNK1A1-207ENST00000515768 FOXD1Q16676 465 aa25.83■■□□□ 1.73
CSNK1A1-207ENST00000515768 PPP6R1Q9UPN7 881 aa24.92■■□□□ 1.58
CSNK1A1-207ENST00000515768 ADRA2BP18089 450 aa24.89■■□□□ 1.58
CSNK1A1-207ENST00000515768 PIAS4Q8N2W9 510 aaPredicted RBP24.35■■□□□ 1.49
CSNK1A1-207ENST00000515768 MSH5O43196 834 aa23.76■■□□□ 1.39
CSNK1A1-207ENST00000515768 PPP4R3CPQ6ZMV5 832 aa22.98■■□□□ 1.27
CSNK1A1-207ENST00000515768 SCAF1Q9H7N4 1312 aaKnown RBP22.71■■□□□ 1.23
CSNK1A1-207ENST00000515768 MAPK8IP2Q13387 824 aaPredicted RBP22.59■■□□□ 1.21
CSNK1A1-207ENST00000515768 KCNA4P22459 653 aa22.5■■□□□ 1.19
CSNK1A1-207ENST00000515768 NCBP3Q53F19 620 aaKnown RBP22.35■■□□□ 1.17
CSNK1A1-207ENST00000515768 CNKSR2Q8WXI2 1034 aa22.3■■□□□ 1.16
CSNK1A1-207ENST00000515768 DMRT2Q9Y5R5 561 aa22.21■■□□□ 1.15
CSNK1A1-207ENST00000515768 NPM3O75607 178 aaKnown RBP22.06■■□□□ 1.12
CSNK1A1-207ENST00000515768 RNF216Q9NWF9 866 aaPredicted RBP21.86■■□□□ 1.09
CSNK1A1-207ENST00000515768 HOXD11P31277 338 aaPredicted RBP21.77■■□□□ 1.08
CSNK1A1-207ENST00000515768 POTEDQ86YR6 584 aa21.6■■□□□ 1.05
CSNK1A1-207ENST00000515768 SLC4A1APQ9BWU0 796 aaKnown RBP21.42■■□□□ 1.02
CSNK1A1-207ENST00000515768 DNAJC5BQ9UF47 199 aa21.39■■□□□ 1.01
CSNK1A1-207ENST00000515768 DCAF8L1A6NGE4 600 aa21.25■□□□□ 0.99
CSNK1A1-207ENST00000515768 EHMT2Q96KQ7 1210 aa20.87■□□□□ 0.93
CSNK1A1-207ENST00000515768 SLC4A2P04920 1241 aa20.84■□□□□ 0.93
CSNK1A1-207ENST00000515768 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.75■□□□□ 0.911e-7■■□□□ 14.4
CSNK1A1-207ENST00000515768 ZBTB22O15209 634 aa20.72■□□□□ 0.91
CSNK1A1-207ENST00000515768 FOXD4L1Q9NU39 408 aa20.67■□□□□ 0.9
CSNK1A1-207ENST00000515768 CSRNP3Q8WYN3 585 aa20.63■□□□□ 0.89
CSNK1A1-207ENST00000515768 U3KPZ7 1027 aaPredicted RBP20.43■□□□□ 0.86
CSNK1A1-207ENST00000515768 RNF39Q9H2S5 420 aa20.39■□□□□ 0.85
CSNK1A1-207ENST00000515768 MYCNP04198 464 aaPredicted RBP20.36■□□□□ 0.85
CSNK1A1-207ENST00000515768 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.13■□□□□ 0.81
CSNK1A1-207ENST00000515768 C1QBPQ07021 282 aaKnown RBP20.13■□□□□ 0.81
CSNK1A1-207ENST00000515768 HNRNPUL2Q1KMD3 747 aaKnown RBP20.13■□□□□ 0.81
CSNK1A1-207ENST00000515768 SAMD1Q6SPF0 538 aaPredicted RBP20.08■□□□□ 0.81
CSNK1A1-207ENST00000515768 ATXN8OSP0DMR3 200 aa19.93■□□□□ 0.78
CSNK1A1-207ENST00000515768 APLP2Q06481 763 aa19.89■□□□□ 0.77
CSNK1A1-207ENST00000515768 ATF5Q9Y2D1 282 aaPredicted RBP19.87■□□□□ 0.77
CSNK1A1-207ENST00000515768 SPINK5Q9NQ38 1064 aaPredicted RBP19.86■□□□□ 0.77
CSNK1A1-207ENST00000515768 CACNB1Q02641 598 aaPredicted RBP19.83■□□□□ 0.77
CSNK1A1-207ENST00000515768 CAPN15O75808 1086 aa19.75■□□□□ 0.75
CSNK1A1-207ENST00000515768 TRHP20396 242 aaPredicted RBP19.68■□□□□ 0.74
CSNK1A1-207ENST00000515768 ZNF219Q9P2Y4 722 aaPredicted RBP19.65■□□□□ 0.74
CSNK1A1-207ENST00000515768 DSG3P32926 999 aa19.43■□□□□ 0.7
CSNK1A1-207ENST00000515768 ABCB7O75027 752 aa19.4■□□□□ 0.7
CSNK1A1-207ENST00000515768 POLA2Q14181 598 aa19.37■□□□□ 0.69
CSNK1A1-207ENST00000515768 MKRN4PQ13434 485 aaPredicted RBP19■□□□□ 0.63
CSNK1A1-207ENST00000515768 ZBTB12Q9Y330 459 aaPredicted RBP19■□□□□ 0.63
CSNK1A1-207ENST00000515768 FBLN2P98095 1184 aa18.97■□□□□ 0.63
CSNK1A1-207ENST00000515768 OSCARQ8IYS5 282 aa18.72■□□□□ 0.59
CSNK1A1-207ENST00000515768 FKBP8Q14318 412 aa18.63■□□□□ 0.57
CSNK1A1-207ENST00000515768 SPDYE4A6NLX3 237 aa18.56■□□□□ 0.56
CSNK1A1-207ENST00000515768 SPDYE2BA6NHP3 402 aa18.52■□□□□ 0.56
CSNK1A1-207ENST00000515768 SPDYE6P0CI01 402 aa18.52■□□□□ 0.56
CSNK1A1-207ENST00000515768 SPDYE2Q495Y8 402 aa18.52■□□□□ 0.56
CSNK1A1-207ENST00000515768 ZNF692Q9BU19 519 aaPredicted RBP18.47■□□□□ 0.55
CSNK1A1-207ENST00000515768 RBM42Q9BTD8 480 aaKnown RBP18.46■□□□□ 0.55
CSNK1A1-207ENST00000515768 SSUH2Q9Y2M2 353 aa18.4■□□□□ 0.54
CSNK1A1-207ENST00000515768 PROM2Q8N271 834 aa18.27■□□□□ 0.52
CSNK1A1-207ENST00000515768 AKT1S1Q96B36 256 aa18.27■□□□□ 0.52
CSNK1A1-207ENST00000515768 PABPN1Q86U42 306 aaKnown RBP eCLIP18.24■□□□□ 0.51
CSNK1A1-207ENST00000515768 REM2Q8IYK8 340 aaPredicted RBP18.12■□□□□ 0.49
CSNK1A1-207ENST00000515768 SPDYE1Q8NFV5 336 aaPredicted RBP17.96■□□□□ 0.47
CSNK1A1-207ENST00000515768 STAG3Q9UJ98 1225 aa17.91■□□□□ 0.46
CSNK1A1-207ENST00000515768 FBXO3Q9UK99 471 aa17.91■□□□□ 0.46
CSNK1A1-207ENST00000515768 PITPNM1O00562 1244 aa17.9■□□□□ 0.46
CSNK1A1-207ENST00000515768 CLEC11AQ9Y240 323 aa17.9■□□□□ 0.46
CSNK1A1-207ENST00000515768 PRR29P0C7W0 189 aa17.74■□□□□ 0.43
CSNK1A1-207ENST00000515768 CHRDL2Q6WN34 429 aa17.71■□□□□ 0.43
CSNK1A1-207ENST00000515768 VASPP50552 380 aaPredicted RBP17.7■□□□□ 0.42
CSNK1A1-207ENST00000515768 MIER1Q8N108 512 aa17.6■□□□□ 0.41
CSNK1A1-207ENST00000515768 PLCD3Q8N3E9 789 aa17.57■□□□□ 0.4
CSNK1A1-207ENST00000515768 FXR2P51116 673 aaKnown RBP eCLIP17.56■□□□□ 0.4
CSNK1A1-207ENST00000515768 CREBZFQ9NS37 354 aa17.55■□□□□ 0.4
CSNK1A1-207ENST00000515768 PIP4P2Q8N4L2 257 aa17.51■□□□□ 0.39
CSNK1A1-207ENST00000515768 IFNLR1Q8IU57 520 aaPredicted RBP17.49■□□□□ 0.39
CSNK1A1-207ENST00000515768 CHADLQ6NUI6 762 aa17.48■□□□□ 0.39
CSNK1A1-207ENST00000515768 PLEKHG5O94827 1062 aa17.46■□□□□ 0.39
CSNK1A1-207ENST00000515768 PRKAR2AP13861 404 aaKnown RBP17.45■□□□□ 0.38
CSNK1A1-207ENST00000515768 KLHL34Q8N239 644 aa17.39■□□□□ 0.37
CSNK1A1-207ENST00000515768 MNX1P50219 401 aaPredicted RBP17.37■□□□□ 0.37
CSNK1A1-207ENST00000515768 ZBTB47Q9UFB7 747 aaPredicted RBP17.33■□□□□ 0.36
CSNK1A1-207ENST00000515768 FARP1Q9Y4F1 1045 aaPredicted RBP17.31■□□□□ 0.36
CSNK1A1-207ENST00000515768 SPOCK2Q92563 424 aa17.24■□□□□ 0.35
CSNK1A1-207ENST00000515768 NPM1P06748 294 aaKnown RBP eCLIP17.22■□□□□ 0.35
CSNK1A1-207ENST00000515768 NUBP1P53384 320 aa17.16■□□□□ 0.34
CSNK1A1-207ENST00000515768 POTEHQ6S545 545 aa17.11■□□□□ 0.33
CSNK1A1-207ENST00000515768 RASEFQ8IZ41 740 aa17.08■□□□□ 0.32
CSNK1A1-207ENST00000515768 AMER1Q5JTC6 1135 aaPredicted RBP17.02■□□□□ 0.32
CSNK1A1-207ENST00000515768 RTN4Q9NQC3 1192 aaKnown RBP17.01■□□□□ 0.31
CSNK1A1-207ENST00000515768 FAM212AQ96EL1 285 aa16.99■□□□□ 0.31
CSNK1A1-207ENST00000515768 DCAF8Q5TAQ9 597 aa16.98■□□□□ 0.31
CSNK1A1-207ENST00000515768 CIZ1Q9ULV3 898 aaPredicted RBP16.98■□□□□ 0.31
CSNK1A1-207ENST00000515768 TSPYL2Q9H2G4 693 aaPredicted RBP16.97■□□□□ 0.31
CSNK1A1-207ENST00000515768 C19orf67A6NJJ6 358 aa16.96■□□□□ 0.31
CSNK1A1-207ENST00000515768 CD44P16070 742 aaKnown RBP16.95■□□□□ 0.3
CSNK1A1-207ENST00000515768 GSE1Q14687 1217 aa16.94■□□□□ 0.3
CSNK1A1-207ENST00000515768 HAX1O00165 279 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms